Contig 009738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP017A01Sequence349009738 (4)ref|XP_011071017.1|4e-33PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum]
JMFF035E07Sequence523009517 (3)gb|AAT39949.1|3e-99Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]705009738 (4)gb|KHN08691.1|1e-54Homeobox-leucine zipper protein ATHB-13 [Glycine soja]
JMSF011D13Sequence334009517 (3)gb|AAT39949.1|3e-08Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]735009738 (4)ref|XP_011071017.1|2e-36PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum]
JMSF044C13Sequence409009517 (3)626009738 (4)ref|XP_011071017.1|1e-34PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011D13+ TGGCGCGNTTAGAAATTACAAAGATGGAGTGGGCGGGAATTCTAAAGCTGATAAAATA
                      ____________________________________________________________
consensus TGGCGCGNTTAGAAATTACAAAGATGGAGTGGGCGGGAATTCTAAAGCTGATAAAATA
 
. : . : . : . : . : . :
rJMSF011D13+ CAGAACCGCAACTTGGGGTTTGTATGTATTGTTTAATTAAATTTTGACATGATGTATGGT
                      ____________________________________________________________
consensus CAGAACCGCAACTTGGGGTTTGTATGTATTGTTTAATTAAATTTTGACATGATGTATGGT
 
. : . : . : . : . : . :
rJMSF044C13+ AGATAATGGCA
rJMSF011D13+ TAATTTGTGAATTGAGAAATAATACAAAAGTGGTGTCCTGGGCCTCCTCAGATAATGGCA
rJMFF035E07+ AGATAATGGCA
                      ____________________________________________________________
consensus TAATTTGTGAATTGAGAAATAATACAAAAGTGGTGTCCTGGGCCTCCTCAGATAATGGCA
 
. : . : . : . : . : . :
rJMSF044C13+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
rJMCP017A01- CCATAAACCTGAACAAAGAAACAGAA
rJMSF011D13+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
rJMFF035E07+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
                      ____________________________________________________________
consensus CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
 
. : . : . : . : . : . :
rJMSF044C13+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGNCATNTCAAGAACA
rJMCP017A01- GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATCTCAAGAACA
rJMSF011D13+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATNTCAAGAACA
rJMFF035E07+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATNTCAAGAACA
                      ____________________________________________________________
consensus GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATCTCAAGAACA
 
. : . : . : . : . : . :
rJMSF044C13+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTNTNTTC
rJMCP017A01- ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTCTTC
rJMSF011D13+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTNTTC
rJMFF035E07+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATNTNTNTTC
                      ____________________________________________________________
consensus ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTCTTC
 
. : . : . : . : . : . :
rJMSF044C13+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
rJMCP017A01- CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
rJMSF011D13+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATNT
rJMFF035E07+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTNTTTCACAGTAACCCATNT
                      ____________________________________________________________
consensus CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
 
. : . : . : . : . : . :
rJMSF044C13+ TNTTCCTCAAGGCCCCCTTCTTNTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMCP017A01- TCTTCCTCAAGGCCCCCTTCTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMSF011D13+ TNTTCCTCAAGGCCCCCTTNTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMFF035E07+ TNTTCCTCAAGGCCCCCTTNTTNTTCCTCAGATNTCCACCCTCAATNTGTCAAAGAAGAA
                      ____________________________________________________________
consensus TCTTCCTCAAGGCCCCCTTCTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
 
. : . : . : . : . : . :
rJMSF044C13+ ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMCP017A01- ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMSF011D13+ ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMFF035E07+ ACCCTATCCACCATGTTNTGTGGCATTGATGACCAGTCCGGGTTNTGGCCATGGTTGGAG
                      ____________________________________________________________
consensus ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
 
. : . : . : . : . : . :
rJMSF044C13+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
rJMCP017A01- CAACAGCATTTCAATTAAGACCC
rJMSF011D13+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
rJMFF035E07+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
                      ____________________________________________________________
consensus CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
 
. : . : . : . : . : . :
rJMSF044C13+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
rJMSF011D13+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
rJMFF035E07+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTNTTAATTAGTTTAT
                      ____________________________________________________________
consensus CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
 
. : . : . : . : . : . :
rJMSF044C13+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
rJMSF011D13+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCANGTGCATGGTGTATAAATTAAAGTAGCA
rJMFF035E07+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
                      ____________________________________________________________
consensus GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
 
. : . : . : . : . : . :
rJMSF044C13+ AA
rJMSF011D13+ AA
rJMFF035E07+ AACTTAAGAAGTATTACTTTTTTTTTTATCAGATCTTTATGGAGAAATAATAATGAAAAG
                      ____________________________________________________________
consensus AACTTAAGAAGTATTACTTTTTTTTTTATCAGATCTTTATGGAGAAATAATAATGAAAAG