| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP017A01 | Sequence | 349 | 009738 (4) | ref|XP_011071017.1| | 4e-33 | PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum] | |||||
| JMFF035E07 | Sequence | 523 | 009517 (3) | gb|AAT39949.1| | 3e-99 | Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum] | 705 | 009738 (4) | gb|KHN08691.1| | 1e-54 | Homeobox-leucine zipper protein ATHB-13 [Glycine soja] |
| JMSF011D13 | Sequence | 334 | 009517 (3) | gb|AAT39949.1| | 3e-08 | Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum] | 735 | 009738 (4) | ref|XP_011071017.1| | 2e-36 | PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum] |
| JMSF044C13 | Sequence | 409 | 009517 (3) | 626 | 009738 (4) | ref|XP_011071017.1| | 1e-34 | PREDICTED: homeobox-leucine zipper protein ATHB-13 [Sesamum indicum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF011D13+ TGGCGCGNTTAGAAATTACAAAGATGGAGTGGGCGGGAATTCTAAAGCTGATAAAATA
____________________________________________________________
consensus TGGCGCGNTTAGAAATTACAAAGATGGAGTGGGCGGGAATTCTAAAGCTGATAAAATA
. : . : . : . : . : . :
rJMSF011D13+ CAGAACCGCAACTTGGGGTTTGTATGTATTGTTTAATTAAATTTTGACATGATGTATGGT
____________________________________________________________
consensus CAGAACCGCAACTTGGGGTTTGTATGTATTGTTTAATTAAATTTTGACATGATGTATGGT
. : . : . : . : . : . :
rJMSF044C13+ AGATAATGGCA
rJMSF011D13+ TAATTTGTGAATTGAGAAATAATACAAAAGTGGTGTCCTGGGCCTCCTCAGATAATGGCA
rJMFF035E07+ AGATAATGGCA
____________________________________________________________
consensus TAATTTGTGAATTGAGAAATAATACAAAAGTGGTGTCCTGGGCCTCCTCAGATAATGGCA
. : . : . : . : . : . :
rJMSF044C13+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
rJMCP017A01- CCATAAACCTGAACAAAGAAACAGAA
rJMSF011D13+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
rJMFF035E07+ CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
____________________________________________________________
consensus CTGAAGAACAGCAGGGATCATCAGCCCACAGAGTCCATAAACCTGAACAAAGAAACAGAA
. : . : . : . : . : . :
rJMSF044C13+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGNCATNTCAAGAACA
rJMCP017A01- GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATCTCAAGAACA
rJMSF011D13+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATNTCAAGAACA
rJMFF035E07+ GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATNTCAAGAACA
____________________________________________________________
consensus GGATCATGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAAGCTGGACATCTCAAGAACA
. : . : . : . : . : . :
rJMSF044C13+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTNTNTTC
rJMCP017A01- ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTCTTC
rJMSF011D13+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTNTTC
rJMFF035E07+ ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATNTNTNTTC
____________________________________________________________
consensus ACAGCAACAGCCATTGATAGCCACCCTCCATTAACTGGCAATGGCAGCAGATCTCTCTTC
. : . : . : . : . : . :
rJMSF044C13+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
rJMCP017A01- CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
rJMSF011D13+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATNT
rJMFF035E07+ CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTNTTTCACAGTAACCCATNT
____________________________________________________________
consensus CCACCCAACACTATGAGGCCAGCTGGGATGCCCCACCACCTCTTTCACAGTAACCCATCT
. : . : . : . : . : . :
rJMSF044C13+ TNTTCCTCAAGGCCCCCTTCTTNTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMCP017A01- TCTTCCTCAAGGCCCCCTTCTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMSF011D13+ TNTTCCTCAAGGCCCCCTTNTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
rJMFF035E07+ TNTTCCTCAAGGCCCCCTTNTTNTTCCTCAGATNTCCACCCTCAATNTGTCAAAGAAGAA
____________________________________________________________
consensus TCTTCCTCAAGGCCCCCTTCTTCTTCCTCAGATCTCCACCCTCAATCTGTCAAAGAAGAA
. : . : . : . : . : . :
rJMSF044C13+ ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMCP017A01- ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMSF011D13+ ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
rJMFF035E07+ ACCCTATCCACCATGTTNTGTGGCATTGATGACCAGTCCGGGTTNTGGCCATGGTTGGAG
____________________________________________________________
consensus ACCCTATCCACCATGTTCTGTGGCATTGATGACCAGTCCGGGTTCTGGCCATGGTTGGAG
. : . : . : . : . : . :
rJMSF044C13+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
rJMCP017A01- CAACAGCATTTCAATTAAGACCC
rJMSF011D13+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
rJMFF035E07+ CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
____________________________________________________________
consensus CAACAGCATTTCAATTAAGACCCAGTGATCATATTGTTATTGTTATTATTATTTTTGCTT
. : . : . : . : . : . :
rJMSF044C13+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
rJMSF011D13+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
rJMFF035E07+ CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTNTTAATTAGTTTAT
____________________________________________________________
consensus CTTTTATTTTCTTGGGTTTGAGTGCAATTTCATATAAGATTTGGGTCTTAATTAGTTTAT
. : . : . : . : . : . :
rJMSF044C13+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
rJMSF011D13+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCANGTGCATGGTGTATAAATTAAAGTAGCA
rJMFF035E07+ GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
____________________________________________________________
consensus GATGATGAGAGTTCTTTGTTGATCAAGGTGCA-GTGCATGGTGTATAAATTAAAGTAGCA
. : . : . : . : . : . :
rJMSF044C13+ AA
rJMSF011D13+ AA
rJMFF035E07+ AACTTAAGAAGTATTACTTTTTTTTTTATCAGATCTTTATGGAGAAATAATAATGAAAAG
____________________________________________________________
consensus AACTTAAGAAGTATTACTTTTTTTTTTATCAGATCTTTATGGAGAAATAATAATGAAAAG