Contig 009731:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033O21Sequence532009731 (2)ref|XP_009630661.1|142PREDICTED: uncharacterized protein LOC104120572 [Nicotiana tomentosiformis]721009731 (2)ref|XP_009630661.1|148PREDICTED: uncharacterized protein LOC104120572 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF033O21-                                                          AGGATAGAGAATT
                      ____________________________________________________________
consensus                                                            AGGATAGAGAATT
 
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JMFF033O21-           TCCTGTTTCTGTTGTTGTTAGGGTTTTGCAGAAGAAATTTCTCTTCGATTCGACCATTAT
                      ____________________________________________________________
consensus             TCCTGTTTCTGTTGTTGTTAGGGTTTTGCAGAAGAAATTTCTCTTCGATTCGACCATTAT
 
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JMFF033O21-           TAGGGTTTTGAAGAAGGAATTGCTTTCGTTTTAGCTTGCTCCTAGTGTAAGAAGGAGGAG
                      ____________________________________________________________
consensus             TAGGGTTTTGAAGAAGGAATTGCTTTCGTTTTAGCTTGCTCCTAGTGTAAGAAGGAGGAG
 
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JMFF033O21-           AAGATGAAGATGGATGGATATTATCCTTTGAAGATGAAGAGGAAGGATCTCGAGCAAGTC
                      ____________________________________________________________
consensus             AAGATGAAGATGGATGGATATTATCCTTTGAAGATGAAGAGGAAGGATCTCGAGCAAGTC
 
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JMFF033O21-           TCCGATGAATTCTCCGATTTTTCCCTCTCTGCTCCCGCCAGAAAAATTCGCCGTCTGGAT
rJMFF033O21+                                                                     T
                      ____________________________________________________________
consensus             TCCGATGAATTCTCCGATTTTTCCCTCTCTGCTCCCGCCAGAAAAATTCGCCGTCTGGAT
 
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JMFF033O21-           GCTGAGTTGCCGCCCATATTGGAAGAGATTGAGGATGACCGTGATATTCCGGTAGCATTT
rJMFF033O21+          GCTGAGTTGCCGCCCATATNGGAAGAGATTGAGGATGACCGTGATATTCCGGTAGCATTT
                      ____________________________________________________________
consensus             GCTGAGTTGCCGCCCATATTGGAAGAGATTGAGGATGACCGTGATATTCCGGTAGCATTT
 
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JMFF033O21-           GAGCCATCGCCGAGTGGACAGAGCTTCGGAGGCTATGGAAGGAGGGGTGTAGTGATTGAG
rJMFF033O21+          GAGCCATCGCCGAGTGGACAGAGCTTCGGAGGCTATGGAAGGAGGGGTGTAGTGATTGAG
                      ____________________________________________________________
consensus             GAGCCATCGCCGAGTGGACAGAGCTTCGGAGGCTATGGAAGGAGGGGTGTAGTGATTGAG
 
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JMFF033O21-           GAATTGCCGGATGTGCCTGATAACAAGGAGACTGCCATTGTGCTTTTCAAGCCCATGGAT
rJMFF033O21+          GAATTGCCGGATGTGCCTGATAACAAGGAGACTGCCATTGTGCTTTTCAAGCCCATGGAT
                      ____________________________________________________________
consensus             GAATTGCCGGATGTGCCTGATAACAAGGAGACTGCCATTGTGCTTTTCAAGCCCATGGAT
 
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JMFF033O21-           ACACCTTTCGTTCTCTCCCCCCAGAATTTCTCCGTTAAGATCGATCCTCAGTTCATTTCT
rJMFF033O21+          ACACCTTTCGTTCTCTCCCCCCAGAATTTCTCCGTTAAGATCGATCCTCAGTTCATTTCT
                      ____________________________________________________________
consensus             ACACCTTTCGTTCTCTCCCCCCAGAATTTCTCCGTTAAGATCGATCCTCAGTTCATTTCT
 
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JMFF033O21-           GAGTTGAAAAATCAAGTCCCATGGCGAAGCCAATCCAAT                     
rJMFF033O21+          GAGTTGAAAAATCAAGTCCCATGGCGAAGCCAATCCAATCCACTAGGGCAAGATGAAGAT
                      ____________________________________________________________
consensus             GAGTTGAAAAATCAAGTCCCATGGCGAAGCCAATCCAATCCACTAGGGCAAGATGAAGAT
 
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rJMFF033O21+          GGAACAAAAGAAATGGGCAACACCTCTGCTGCAAGAAACCAGTGCCTTGCAGTTGTTCCC
                      ____________________________________________________________
consensus             GGAACAAAAGAAATGGGCAACACCTCTGCTGCAAGAAACCAGTGCCTTGCAGTTGTTCCC
 
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rJMFF033O21+          TGGGTGCCATCTCAGTTCCCCACATCCCAAACCGACATTACAGACATGATGGATGCTGAA
                      ____________________________________________________________
consensus             TGGGTGCCATCTCAGTTCCCCACATCCCAAACCGACATTACAGACATGATGGATGCTGAA
 
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rJMFF033O21+          GAATTGGAGGAAGCAACAATGGAGGTTGAAGACAATGGCATTGCAGCTGCAGATGATCAA
                      ____________________________________________________________
consensus             GAATTGGAGGAAGCAACAATGGAGGTTGAAGACAATGGCATTGCAGCTGCAGATGATCAA
 
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rJMFF033O21+          AGGATCATGGATATGGGTGGAAATGAGGGGCTGCAGCAGTGGCAACAACAGCATTGCATG
                      ____________________________________________________________
consensus             AGGATCATGGATATGGGTGGAAATGAGGGGCTGCAGCAGTGGCAACAACAGCATTGCATG
 
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rJMFF033O21+          GTCCCTCAGCCTCCCCAGAACGTATCTACTCCCATAACCTGGTACCGATAATAGTAAGTA
                      ____________________________________________________________
consensus             GTCCCTCAGCCTCCCCAGAACGTATCTACTCCCATAACCTGGTACCGATAATAGTAAGTA
 
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rJMFF033O21+          TATAAACATGTTGTGGTGATGGGGTGTGTTGCAAGTATGAGAGGAAGTAGTGGTCTGCCT
                      ____________________________________________________________
consensus             TATAAACATGTTGTGGTGATGGGGTGTGTTGCAAGTATGAGAGGAAGTAGTGGTCTGCCT
 
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rJMFF033O21+          TAGTCACCAGATGGTGAAGTATTTGATCTCTGTGTATTGTACAAATGTACAANTCAAGGC
                      ____________________________________________________________
consensus             TAGTCACCAGATGGTGAAGTATTTGATCTCTGTGTATTGTACAAATGTACAANTCAAGGC