Contig 009722:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032C09Sequence566009722 (2)ref|XP_009770696.1|1e-92PREDICTED: mitochondrial amidoxime reducing component 2-like [Nicotiana sylvest700009722 (2)ref|XP_009770696.1|7e-76PREDICTED: mitochondrial amidoxime reducing component 2-like [Nicotiana sylvest

Alignment

This contig is upended


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JMFF032C09-                                     GGTGTTTTTCTCGTATTTTAATTAGAGAAAGAGA
                      ____________________________________________________________
consensus                                       GGTGTTTTTCTCGTATTTTAATTAGAGAAAGAGA
 
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JMFF032C09-           GAGAGATGGCAGAGTTGAATGAAGGAGCTGCTGCTGAGGTAACATCAATCTTCATATATC
                      ____________________________________________________________
consensus             GAGAGATGGCAGAGTTGAATGAAGGAGCTGCTGCTGAGGTAACATCAATCTTCATATATC
 
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JMFF032C09-           CAATCAAATCTTGCCGTGGAATCTCCGTTTCTCAGGCACCCATCTCCCCCACTGGATTTC
                      ____________________________________________________________
consensus             CAATCAAATCTTGCCGTGGAATCTCCGTTTCTCAGGCACCCATCTCCCCCACTGGATTTC
 
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JMFF032C09-           GCTGGGATCGACAATGGATGGTTGTGAATTCCAAAGGCCGAGCCCGTACCCAAAGAGTTG
                      ____________________________________________________________
consensus             GCTGGGATCGACAATGGATGGTTGTGAATTCCAAAGGCCGAGCCCGTACCCAAAGAGTTG
 
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JMFF032C09-           ATCCAAAGCTAGCTCTAGTTGAAACAGAATTGCCTAACGAGGCTATGTCTGAGGGCTGGG
                      ____________________________________________________________
consensus             ATCCAAAGCTAGCTCTAGTTGAAACAGAATTGCCTAACGAGGCTATGTCTGAGGGCTGGG
 
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JMFF032C09-           AACCAAATAAGAACTCGTATTTAGTTATAAGGGCGCCTGGTATGCAAGCTCTGAAAGTTC
                      ____________________________________________________________
consensus             AACCAAATAAGAACTCGTATTTAGTTATAAGGGCGCCTGGTATGCAAGCTCTGAAAGTTC
 
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JMFF032C09-           CGTTAACTAAGCCTTCTCTCACAACAGAGGGTATCTCGGTGTGGGAATGGTCTGGCTCCG
                      ____________________________________________________________
consensus             CGTTAACTAAGCCTTCTCTCACAACAGAGGGTATCTCGGTGTGGGAATGGTCTGGCTCCG
 
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JMFF032C09-           CATTTGATGAGGGAGATGAAGCAGCAACGTGGTTCTCCAATTATCTTGGAAAACCCAATC
                      ____________________________________________________________
consensus             CATTTGATGAGGGAGATGAAGCAGCAACGTGGTTCTCCAATTATCTTGGAAAACCCAATC
 
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JMFF032C09-           GACTAGTGCGCTTTAATGAAGCCTCAGAAACGAGGGTCGTAGACCCTGAATATG-CCCGT
rJMFF032C09+                                 TCAGAAACGAGGGTCGTAGACCCTGAATATGCCCCGT
                      ____________________________________________________________
consensus             GACTAGTGCGCTTTAATGAAGCCTCAGAAACGAGGGTCGTAGACCCTGAATATGCCCCGT
 
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JMFF032C09-           GGATACAAGGTTAAATTTTCCGATGGATATCCATTTCTCATCCTATCCCAGGG       
rJMFF032C09+          GGATACAAGGTTAAATTTTCCGATGGATATCCATTTCTCATCCTATCCCAGGGATCATTA
                      ____________________________________________________________
consensus             GGATACAAGGTTAAATTTTCCGATGGATATCCATTTCTCATCCTATCCCAGGGATCATTA
 
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rJMFF032C09+          AACACGTTAAATACCCTTCTCAAGGAGCCCATTCCAGTGAATCGTTTTAGACCCAATATA
                      ____________________________________________________________
consensus             AACACGTTAAATACCCTTCTCAAGGAGCCCATTCCAGTGAATCGTTTTAGACCCAATATA
 
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rJMFF032C09+          CTCGTTGATGGATGCCAGCAATATGCAGAGGATTTGTGGAAGGAGATCCTGATAAGCAAG
                      ____________________________________________________________
consensus             CTCGTTGATGGATGCCAGCAATATGCAGAGGATTTGTGGAAGGAGATCCTGATAAGCAAG
 
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rJMFF032C09+          TCGACGTTTTATGGTGTTAAATTATGCAGTCGCTGCAAGATACCCACAATCAATCAAGAA
                      ____________________________________________________________
consensus             TCGACGTTTTATGGTGTTAAATTATGCAGTCGCTGCAAGATACCCACAATCAATCAAGAA
 
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rJMFF032C09+          ACTGCAGAAATGGGGTCTGAACCAACTCAAACTCTCAAGCAGTTCCGTTCGGATCAAGTA
                      ____________________________________________________________
consensus             ACTGCAGAAATGGGGTCTGAACCAACTCAAACTCTCAAGCAGTTCCGTTCGGATCAAGTA
 
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rJMFF032C09+          TTGCTTCCAAATAAGAAACAACAGGGAAGTGTGTTTTTTGGGCAGAATATGGTTTGTGCT
                      ____________________________________________________________
consensus             TTGCTTCCAAATAAGAAACAACAGGGAAGTGTGTTTTTTGGGCAGAATATGGTTTGTGCT
 
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rJMFF032C09+          GACTCCCTTGGCCAGGTTAAGATAATCAAAGTTGGTGATCCTGTTCATGTCATCAAAGCA
                      ____________________________________________________________
consensus             GACTCCCTTGGCCAGGTTAAGATAATCAAAGTTGGTGATCCTGTTCATGTCATCAAAGCA
 
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rJMFF032C09+          GTGCCCTCCTGCACTGAAGCAGCTGCTTGAACTCTTGCTTCTAGAATGATCTAGTTAATC
                      ____________________________________________________________
consensus             GTGCCCTCCTGCACTGAAGCAGCTGCTTGAACTCTTGCTTCTAGAATGATCTAGTTAATC
 
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rJMFF032C09+          TCTTCTTAATCTAAATTATGGAAATAAATCATAGTCTATCTATCTAGAGTATAACATACC
                      ____________________________________________________________
consensus             TCTTCTTAATCTAAATTATGGAAATAAATCATAGTCTATCTATCTAGAGTATAACATACC
 
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rJMFF032C09+          ATAATACCAATTATAATTATAATATCAATAACTATGGTTTATGATGCATGAAAACTTTCA
                      ____________________________________________________________
consensus             ATAATACCAATTATAATTATAATATCAATAACTATGGTTTATGATGCATGAAAACTTTCA
 
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rJMFF032C09+          AGTCTTAATGTTTTCATGTTTCAGAGATCATTTCTCTACTGTTGTGTATCTTGTTTCTCT
                      ____________________________________________________________
consensus             AGTCTTAATGTTTTCATGTTTCAGAGATCATTTCTCTACTGTTGTGTATCTTGTTTCTCT