Contig 009721:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031M23Sequence588007415 (2)gb|KJB77816.1|6e-100hypothetical protein B456_012G159000 [Gossypium raimondii] gb|KJB77817.1| hypoth772009721 (2)ref|XP_011070505.1|1e-69PREDICTED: protein NRT1/ PTR FAMILY 8.3-like [Sesamum indicum]
JMFF039I08Sequence517007415 (2)gb|KJB77816.1|2e-63hypothetical protein B456_012G159000 [Gossypium raimondii] gb|KJB77817.1| hypoth694009721 (2)gb|EYU35700.1|2e-57hypothetical protein MIMGU_mgv1a0209461mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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rJMFF031M23+                  GTTCGTTCAACATCCCAGCAGCCTCGCTTTCTAGTTTCAACGTTATCAGCGT
                      ____________________________________________________________
consensus                     GTTCGTTCAACATCCCAGCAGCCTCGCTTTCTAGTTTCAACGTTATCAGCGT
 
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rJMFF039I08+                             TACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCAGGGG
rJMFF031M23+          CCTAGTCTGTGTCCCAATCTACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCACGGG
                      ____________________________________________________________
consensus             CCTAGTCTGTGTCCCAATCTACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCAGGGG
 
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rJMFF039I08+          GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
rJMFF031M23+          GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
                      ____________________________________________________________
consensus             GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
 
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rJMFF039I08+          GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
rJMFF031M23+          GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
                      ____________________________________________________________
consensus             GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
 
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rJMFF039I08+          GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
rJMFF031M23+          GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
                      ____________________________________________________________
consensus             GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
 
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rJMFF039I08+          GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
rJMFF031M23+          GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
                      ____________________________________________________________
consensus             GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
 
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rJMFF039I08+          AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
rJMFF031M23+          AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
                      ____________________________________________________________
consensus             AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
 
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rJMFF039I08+          TATGATCAGTGTTGTCTCATCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
rJMFF031M23+          TATGATCAGTGTTGTCTCGTCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
                      ____________________________________________________________
consensus             TATGATCAGTGTTGTCTCGTCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
 
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rJMFF039I08+          CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
rJMFF031M23+          CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
                      ____________________________________________________________
consensus             CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
 
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rJMFF039I08+          CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
rJMFF031M23+          CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
                      ____________________________________________________________
consensus             CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
 
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rJMFF039I08+          TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
rJMFF031M23+          TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
                      ____________________________________________________________
consensus             TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
 
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rJMFF039I08+          ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
rJMFF031M23+          ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
                      ____________________________________________________________
consensus             ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
 
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rJMFF039I08+          ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAG       
rJMFF031M23+          ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAGGACAAAA
                      ____________________________________________________________
consensus             ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAGGACAAAA