Contig 009720:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031A10Sequence134003364 (7)623009720 (4)ref|XP_009610275.1|8e-68PREDICTED: cation/calcium exchanger 3-like [Nicotiana tomentosiformis]
JMFS158H05Sequence384009720 (4)ref|XP_009359727.1|2e-52PREDICTED: cation/calcium exchanger 4-like [Pyrus x bretschneideri] ref|XP_00935
JMFS160C12Sequence625009720 (4)ref|XP_009610275.1|4e-79PREDICTED: cation/calcium exchanger 3-like [Nicotiana tomentosiformis]
JMSF003O23Sequence163003364 (7)718009720 (4)ref|XP_009610275.1|1e-78PREDICTED: cation/calcium exchanger 3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS158H05-                                    CAAGGGAGGCTCCCTCGGGGCCGAGATTGTGTACA
JMFS160C12-                                    CAAGGGAGGCTCCCTCGGGGCCGAGATTGTGTACA
rJMSF003O23+                                                    GGGCCGAGATTGTGTACA
                      ____________________________________________________________
consensus                                      CAAGGGAGGCTCCCTCGGGGCCGAGATTGTGTACA
 
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JMFS158H05-           TCATTGGTGCTGGCTCGGGTGGCGTCCTGGGAGGCCTTGCGTTCGTCTACACCAAACCCG
JMFS160C12-           TCATTGGTGCTGGCTCGGGTGGCGTCCTGGGAGGCCTTGCGTTCGTCTACACCAAACCCG
rJMSF003O23+          GCATTGGTGCTGGCTCGGGTGGCGTCCTGGGAGGCCTTGCGTTCGTCTACACCAAACCCG
                      ____________________________________________________________
consensus             TCATTGGTGCTGGCTCGGGTGGCGTCCTGGGAGGCCTTGCGTTCGTCTACACCAAACCCG
 
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JMFS158H05-           ATCGCCCACCCGAGAAGTTCTTGTTCCCGTGGATCTTCGGGGGGTTCTTCATGAGCATCA
JMFS160C12-           ATCGCCCACCCGAGAAGTTCTTGTTCCCGTGGATCTTCGGGGGGTTCTTCATGAGCATCA
rJMSF003O23+          ATCGCCCACCCGAGAAGTTCTTGTTCCCGTGGATCTTCGGGGGGTTCTTCATGAGCATCA
rJMFF031A10+                                               CGGGGGGTTCTTCATGAGCATCA
                      ____________________________________________________________
consensus             ATCGCCCACCCGAGAAGTTCTTGTTCCCGTGGATCTTCGGGGGGTTCTTCATGAGCATCA
 
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JMFS158H05-           TATGGTTCTACATCGTGGCAAATGAACTAGTCGCCCTCTTAGTGGCATTCGGGGTCATAT
JMFS160C12-           TATGGTTCTACATCGTGGCAAATGAACTAGTCGCCCTCTTAGTGGCATTCGGGGTCATAT
rJMSF003O23+          TATGGTTCTACATCGTGGCAAATGAACTAGTCGCCCTCTTAGTGGCATTCGGGGTCATAT
rJMFF031A10+          TATGGTTCTACATCGTGGCAAATGAACTAGTCGCCCTCTTAGTGGCATTCGGGGTCATAT
                      ____________________________________________________________
consensus             TATGGTTCTACATCGTGGCAAATGAACTAGTCGCCCTCTTAGTGGCATTCGGGGTCATAT
 
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JMFS158H05-           TTGGCATCAACCCCTCGCTCCTTGCCTTAACCGTCTTGGCTTGGGGCAACTCGATGGGAG
JMFS160C12-           TTGGCATCAACCCCTCGCTCCTTGCCTTAACCGTCTTGGCTTGGGGCAACTCGATGGGAG
rJMSF003O23+          TTGGCATCAACCCCTCGCTCCTTGCCTTAACCGTCTTGGCTTGGGGCAACTCGATGGGAG
rJMFF031A10+          TTGGCATCAACCCCTCGCTCCTTGCCTTAACCGTCTTGGCTTGGGGCAACTCGATGGGAG
                      ____________________________________________________________
consensus             TTGGCATCAACCCCTCGCTCCTTGCCTTAACCGTCTTGGCTTGGGGCAACTCGATGGGAG
 
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JMFS158H05-           ACCTGATCTCCAACGTCGCCATTGCCATGAACAACCGAGATGGCGTGCAGATCGCCATGT
JMFS160C12-           ACCTGATCTCCAACGTCGCCATTGCCATGAACAACCGAGATGGCGTGCAGATCGCCATGT
rJMSF003O23+          ACCTGATCTCCAACGTCGCCATTGCCATGAACAACCGAGATGGCGTGCAGATCGCCATGT
rJMFF031A10+          ACCTGATCTCCAACGTCGCCATTGCCATGAACAACCGAGATGGCGTGCAGATCGCCATGT
                      ____________________________________________________________
consensus             ACCTGATCTCCAACGTCGCCATTGCCATGAACAACCGAGATGGCGTGCAGATCGCCATGT
 
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JMFS158H05-           CGGGCTCCTATGCGGGGCCAATGTTCAACACGCTCGTTGGGCTCGGCAT           
JMFS160C12-           CGGGCTCCTATGCGGGGCCAATGTTCAACACGCTCGTTGGGCTCGGCATCTCCATGATGC
rJMSF003O23+          CGGGCTCCTATGCGGGGCCAATGTTCAACACGCTCGTTGGGCTCGGCATCTCCATGATGC
rJMFF031A10+          CGGGCTCCTATGCGGGGCCAATGTTCAACACGCTCGTTGGGCTCGGCATCTCCATGATGC
                      ____________________________________________________________
consensus             CGGGCTCCTATGCGGGGCCAATGTTCAACACGCTCGTTGGGCTCGGCATCTCCATGATGC
 
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JMFS160C12-           TGGGAGCATGGTCAAAACAACCCGACCCCTACACGATTCCACGGGACAACAACTTGTATT
rJMSF003O23+          TGGGAGCATGGTCAAAACAACCCGACCCCTACACGATTCCACGGGACAACAACTTGTATT
rJMFF031A10+          TGGGAGCATGGTCAAAACAACCCGACCCCTACACGATTCCACGGGACAACAACTTGTATT
                      ____________________________________________________________
consensus             TGGGAGCATGGTCAAAACAACCCGACCCCTACACGATTCCACGGGACAACAACTTGTATT
 
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JMFS160C12-           ACACGCTGGGATTTCTGATGCTGGCGCTTCTGTTTACCCTCGTTGTGCTGCCGAGAAATG
rJMSF003O23+          ACACGCTGGGATTTCTGATGCTGGCGCTTCTGTTTACCCTCGTTGTGCTGCCGAGAAATG
rJMFF031A10+          ACACGCTGGGATTTCTGATGCTGGCGCTTCTGTTTACCCTCGTTGTGCTGCCGAGAAATG
                      ____________________________________________________________
consensus             ACACGCTGGGATTTCTGATGCTGGCGCTTCTGTTTACCCTCGTTGTGCTGCCGAGAAATG
 
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JMFS160C12-           GGATGCGCCCGAGCAGGCTGTTAGGCTTGGGACTTATGACCATTTACTTGGTGTTTCTTT
rJMSF003O23+          GGATGCGCCCGAGCAGGCTGTTAGGCTTGGGACTTATGACCATTTACTTGGTGTTTCTTT
rJMFF031A10+          GGATGCGCCCGAGCAGGCTGTTAGGCTTGGGACTTATGACCATTTACTTGGTGTTTCTTT
                      ____________________________________________________________
consensus             GGATGCGCCCGAGCAGGCTGTTAGGCTTGGGACTTATGACCATTTACTTGGTGTTTCTTT
 
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JMFS160C12-           CTGTCAGGGCTACCATTGCAGTGGGTGATGGATCACTCCTGTTTCGGCCT          
rJMSF003O23+          CTGTCAGGGCTACCATTGCAGTGGGTGATGGATCACTCCTGTTTCGGCCTTGAACTTTTG
rJMFF031A10+          CTGTCAGGGCTACCATTGCAGTGGGTGATGGATCACTCCTGTTTCGGCCTTGAACTTTTG
                      ____________________________________________________________
consensus             CTGTCAGGGCTACCATTGCAGTGGGTGATGGATCACTCCTGTTTCGGCCTTGAACTTTTG
 
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rJMSF003O23+          GATCCATCCATATATGATGATGATGAAAAAACTAAATGTAGTATCCCCAAGATGCATATA
rJMFF031A10+          GATCCATCCATATATGATGATGATGAAAAAACTAAATGTAGTATCCCCAAGATGCATATA
                      ____________________________________________________________
consensus             GATCCATCCATATATGATGATGATGAAAAAACTAAATGTAGTATCCCCAAGATGCATATA
 
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rJMSF003O23+          TGATGAATTACTGTTTGTTTTTGTGTAACATAGAGAGTAG                    
rJMFF031A10+          TGATGAATTACTGTTTGTTTTTGTGTAACATAGAGAGTAGTTCTTGTGTACATTCTGAGC
                      ____________________________________________________________
consensus             TGATGAATTACTGTTTGTTTTTGTGTAACATAGAGAGTAGTTCTTGTGTACATTCTGAGC