| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030I01 | Sequence | 423 | 008046 (4) | ref|XP_009611900.1| | 1e-38 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis] | 741 | 009719 (3) | ref|XP_007157636.1| | 2e-86 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
| JMSF033K14 | Sequence | 693 | 008046 (4) | ref|XP_009790286.1| | 5e-64 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana sylvestris] | 709 | 009719 (3) | ref|XP_007157636.1| | 3e-83 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
| JMSF045E19 | Sequence | 771 | 008046 (4) | ref|XP_009611900.1| | 5e-66 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis] | 720 | 009719 (3) | ref|XP_007157636.1| | 1e-86 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
This contig is upended
. : . : . : . : . : . :
rJMSF033K14+ CAAACTGGAC
rJMSF045E19+ TCCTGCCTGCCAAACTGGAC
rJMFF030I01+ TTCCTGCCTGCCAAACTGGAC
____________________________________________________________
consensus TTCCTGCCTGCCAAACTGGAC
. : . : . : . : . : . :
rJMSF033K14+ TGAGAGGGTAGTGTTTGTGATGACGAGCTTTTGTGTATGCTCAATCCAACATGTTCAGTT
rJMSF045E19+ TGAGAGGGTAGTGTTTGTGATGACGAGCTTTTGTGTATGCTCAATCCAACATGTTCAGTT
rJMFF030I01+ TGAGAGGGTAGTGTTTGTGATGACGAGCTTTTGTGTATGCTCAATCCAACATGTTCAGTT
____________________________________________________________
consensus TGAGAGGGTAGTGTTTGTGATGACGAGCTTTTGTGTATGCTCAATCCAACATGTTCAGTT
. : . : . : . : . : . :
rJMSF033K14+ CTGTCTGAACCATTTCGCGGCCAACGTGTATGTTGGACGTCCAGAGGGGAACGATTGGTT
rJMSF045E19+ CTGTCTGAACCATTTCGCGGCCAACGTGTATGTTGGACGTCCAGAGGGGAACGATTGGTT
rJMFF030I01+ CTGTCTGAACCATTTCGCGGCCAACGTGTATGTTGGACGTCCAGAGGGGAACGATTGGTT
____________________________________________________________
consensus CTGTCTGAACCATTTCGCGGCCAACGTGTATGTTGGACGTCCAGAGGGGAACGATTGGTT
. : . : . : . : . : . :
rJMSF033K14+ CGAAAAGCAGACGAGTGGGACAATCGACATCTCTTGCACCCAATGGATGGATTGGTTCTT
rJMSF045E19+ CGAAAAGCAGACGAGTGGGACAATCGACATCTCTTGCACCCAATGGATGGATTGGTTCTT
rJMFF030I01+ CGAAAAGCAGACGAGTGGGACAATCGACATCTCTTGCACCCAATGGATGGATTGGTTCTT
____________________________________________________________
consensus CGAAAAGCAGACGAGTGGGACAATCGACATCTCTTGCACCCAATGGATGGATTGGTTCTT
. : . : . : . : . : . :
rJMSF033K14+ TGGGGGACTGCAGTTTCAGCTAGAACACCATCTGTTTCCTAGGCTGCCTAGGTGCCAGTT
rJMSF045E19+ TGGGGGACTGCAGTTTCAGCTAGAACACCATCTGTTTCCTAGGCTGCCTAGGTGCCAGTT
rJMFF030I01+ TGGGGGACTGCAGTTTCAGCTAGAACACCATCTGTTTCCTAGGCTGCCTAGGTGCCAGTT
____________________________________________________________
consensus TGGGGGACTGCAGTTTCAGCTAGAACACCATCTGTTTCCTAGGCTGCCTAGGTGCCAGTT
. : . : . : . : . : . :
rJMSF033K14+ AAGGAAGATCTCTCCTGTTGTTCAGAGCCTGTGCAAGAAGCACAATTTGCCTTACAGGAG
rJMSF045E19+ AAGGAAGATCTCTCCTGTTGTTCAGAGCCTGTGCAAGAAGCACAATTTGCCTTACAGGAG
rJMFF030I01+ AAGGAAGATCTCTCCTGTTGTTCAGAGCCTGTGCAAGAAGCACAATTTGCCTTACAGGAG
____________________________________________________________
consensus AAGGAAGATCTCTCCTGTTGTTCAGAGCCTGTGCAAGAAGCACAATTTGCCTTACAGGAG
. : . : . : . : . : . :
rJMSF033K14+ TCTCTCATTCTTCCAGGCCAATGCCACCACCATCAAAACGCTTAGAGCCGCTGCACTCGA
rJMSF045E19+ TCTCTCATTCTTCCAGGCCAATGCCACCACCATCAAAACGCTTAGAGCCGCTGCACTCGA
rJMFF030I01+ TCTCTCATTCTTCCAGGCCAATGCCACCACCATCAAAACGCTTAGAGCCGCTGCACTCGA
____________________________________________________________
consensus TCTCTCATTCTTCCAGGCCAATGCCACCACCATCAAAACGCTTAGAGCCGCTGCACTCGA
. : . : . : . : . : . :
rJMSF033K14+ GGCTCGGGATCTCAGCTGCACAGCCCCCAAGAACTTGCTCTGGGAAGCTGTCAACACCCA
rJMSF045E19+ GGCTCGGGATCTCAGCTGCACAGCCCCCAAGAACTTGCTCTGGGAAGCTGTCAACACCCA
rJMFF030I01+ GGCTCGGGATCTCAGCTGCACAGCCCCCAAGAACTTGCTCTGGGAAGCTGTCAACACCCA
____________________________________________________________
consensus GGCTCGGGATCTCAGCTGCACAGCCCCCAAGAACTTGCTCTGGGAAGCTGTCAACACCCA
. : . : . : . : . : . :
rJMSF033K14+ TGGTTAAGCAGATGTGGCATTCTGTCTGGTGTTGAATACTATGTTTTTTGCTTTTAAGAC
rJMSF045E19+ TGGTTAAGCAGATGTGGCATTCTGTCTGGTGTTGAATACTATGTTTTTTGCTTTTAAGAC
rJMFF030I01+ TGGTTAAGCAGATGTGGCATTCTGTCTGGTGTTGAATACTATGTTTTTTGCTTTTAAGAC
____________________________________________________________
consensus TGGTTAAGCAGATGTGGCATTCTGTCTGGTGTTGAATACTATGTTTTTTGCTTTTAAGAC
. : . : . : . : . : . :
rJMSF033K14+ AGTTTCATAATTCATAGTTGATGTCGTTTTGATTCTTATCCATGGTTGGGGGGAGCATGG
rJMSF045E19+ AGTTTCATAATTCATAGTTGATGTCGTTTTGATTCTTATCCATGGTTGGGGGGAGCATGG
rJMFF030I01+ AGTTTCATAATTCATAGTTGATGTCGTTTTGATTCTTATCCATGGTTGGGGGGAGCATGG
____________________________________________________________
consensus AGTTTCATAATTCATAGTTGATGTCGTTTTGATTCTTATCCATGGTTGGGGGGAGCATGG
. : . : . : . : . : . :
rJMSF033K14+ AGGTGGTGCTGCTGCAGTGCTTTGTATGTTTGATGAGTTTTTGCCCCCTCCCTCTGGATG
rJMSF045E19+ AGGTGGTGCTGCTGCAGTGCTTTGTATGTTTGATGAGTTTTTGCCCCCTCCCTCTGGATG
rJMFF030I01+ AGGTGGTGCTGCTGCAGTGCTTTGTATGTTTGATGAGTTTTTGCCCCCTCCCTCTGGATG
____________________________________________________________
consensus AGGTGGTGCTGCTGCAGTGCTTTGTATGTTTGATGAGTTTTTGCCCCCTCCCTCTGGATG
. : . : . : . : . : . :
rJMSF033K14+ ACTAGATCTGGTTCTGACTCTGCATTTTGAACAGAGCAATAAAGCTCAGCATTTTTATTA
rJMSF045E19+ ACTAGATCTGGTTCTGACTCTGCATTTTGAACAGAGCAATAAAGCTCAGCATTTTTATTA
rJMFF030I01+ ACTAGATCTGGTTCTGACTCTGCATTTTGAACAGAGCAATAAAGCTCAGCATTTTTATTA
____________________________________________________________
consensus ACTAGATCTGGTTCTGACTCTGCATTTTGAACAGAGCAATAAAGCTCAGCATTTTTATTA
. : . : . : . : . : . :
rJMSF033K14+ TGTACTCAAACTTGAAGATAATTCTGCAAACTAGAGCAT
rJMSF045E19+ TGTACTCAAACTTGAAGATAATTCTGCAAACTAGAGCAT
rJMFF030I01+ TGTACTCAAACTTGAAGATAATTCTGCAAACTAGAGCATTTCATGATTCAGAATACAAAC
____________________________________________________________
consensus TGTACTCAAACTTGAAGATAATTCTGCAAACTAGAGCATTTCATGATTCAGAATACAAAC