Contig 009718:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF029O20+                                        GCTCAGCATAGAAGTTTANGAGATTACTCA
                      ____________________________________________________________
consensus                                           GCTCAGCATAGAAGTTTANGAGATTACTCA
 
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rJMSF050M13+                    CTCGCTCAAAATACTATGATGAATCAAAGCCNTGGAATGAAAGGTGTGAT
rJMFF029O20+          AAAACTTATGCTCGCTCAAAATACTATGATGAATCAAAGCCTTGGAATGAAAGGTGTGAT
                      ____________________________________________________________
consensus             AAAACTTATGCTCGCTCAAAATACTATGATGAATCAAAGCCTTGGAATGAAAGGTGTGAT
 
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rJMSF050M13+          GTGGCATTCCCCTGTGCCTCACAGAATGAAATTGATCATTCTGATGCCGTTAACTTGGTA
rJMFF029O20+          GTGGCATTCCCCTGTGCNTCACAGAATGAAATTGATCATTCTGATGCCGTTAACTTGGTA
                      ____________________________________________________________
consensus             GTGGCATTCCCCTGTGCCTCACAGAATGAAATTGATCATTCTGATGCCGTTAACTTGGTA
 
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rJMSF050M13+          AACTCGGGTTGTCGCATAGTTGTAGAAGGCTCAAATATGCCTTGTACCCCTGAGGCAGTT
rJMFF029O20+          AACTCGGGTTGTCGCATAGTTGTAGAAGGCTCAAATATGCCTTGTACCCCTGAGGCAGTT
                      ____________________________________________________________
consensus             AACTCGGGTTGTCGCATAGTTGTAGAAGGCTCAAATATGCCTTGTACCCCTGAGGCAGTT
 
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rJMSF050M13+          GACGTTCTGAGGAAGGCTAATGTTATAGTTGCTCCTTCTATGGCTGCTGGGGTGGGAGGG
rJMFF029O20+          GACGTTCTGAGGAAGGCTAATGTTATAGTTGCTCCTTCTATGGCTGCTGGGGTGGGAGGG
                      ____________________________________________________________
consensus             GACGTTCTGAGGAAGGCTAATGTTATAGTTGCTCCTTCTATGGCTGCTGGGGTGGGAGGG
 
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rJMSF050M13+          GTAGTTGCTGGGGAACTGGAACTGAAGGAGTGTAACTTAAACTGGTCTCCCGAGGATTTT
rJMFF029O20+          GTAGTTGCTGGGGAACTGGAACTGAAGGAGTGTAACTTAAACTGGTCTCCCGAGGATTTT
                      ____________________________________________________________
consensus             GTAGTTGCTGGGGAACTGGAACTGAAGGAGTGTAACTTAAACTGGTCTCCCGAGGATTTT
 
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rJMSF050M13+          GAATCAAAGCTACAGGAAGCAATGAAACTGACATATCAAAGAGCATTAAAAGCAGCAAGT
rJMFF029O20+          GAATCAAAGCTACAGGAAGCAATGAAACTGACATATCAAAGAGCATTAAAAGCAGCAAGT
                      ____________________________________________________________
consensus             GAATCAAAGCTACAGGAAGCAATGAAACTGACATATCAAAGAGCATTAAAAGCAGCAAGT
 
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rJMSF050M13+          GACTTCGGTTATCAGAAAGAGAGTCCTGAGGCTTTGGTACATGGAGCTGCAATTTCCGCC
rJMFF029O20+          GACTTCGGTTATCAGAAAGAGAGTCCTGAGGCTTTGGTACATGGAGCTGCAATTTCCGCC
                      ____________________________________________________________
consensus             GACTTCGGTTATCAGAAAGAGAGTCCTGAGGCTTTGGTACATGGAGCTGCAATTTCCGCC
 
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rJMSF050M13+          TTTCTTACCATTGCCAATGGCATGACAGATCAAGGGTGCGTGTAGTTTCACACCCTCATC
rJMFF029O20+          TTTCTTACCATTGCCAATGGCATGACAGATCAAGGGTGCGTGTAGTTTCACACCCTCATC
                      ____________________________________________________________
consensus             TTTCTTACCATTGCCAATGGCATGACAGATCAAGGGTGCGTGTAGTTTCACACCCTCATC
 
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rJMSF050M13+          CCCCGGGCTTCCTTCCTTCCTTCCTTCAATGCTTCTTCATACAAGCCTGAGATGCATCTT
rJMFF029O20+          CCCCGGGCTTCCTTCCTTCCTTCCTTCAATGCTTCTTCATACAAGCCTGAGATGCATCTT
                      ____________________________________________________________
consensus             CCCCGGGCTTCCTTCCTTCCTTCCTTCAATGCTTCTTCATACAAGCCTGAGATGCATCTT
 
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rJMSF050M13+          ACTTGGTGCAAATATGAAACTAAAGATGTCAGGCATTGCAGTATCGCGCTGTGCCGCTGC
rJMFF029O20+          ACTTGGTGCAAATATGAAACTAAAGATGTCAGGCATTGCAGTATCGCGCTGTGCCGCTGC
                      ____________________________________________________________
consensus             ACTTGGTGCAAATATGAAACTAAAGATGTCAGGCATTGCAGTATCGCGCTGTGCCGCTGC
 
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rJMSF050M13+          CAGTTTAATGCATTATTTGGGCAGCCAAGGAAACTGCACATCTCAATGGTGTGTTTTGTG
rJMFF029O20+          CAGTTTAATGCATTATTTGGGCAGCCAAGGAAACTGCACATCTCAATGGTGTGTTTTGTG
                      ____________________________________________________________
consensus             CAGTTTAATGCATTATTTGGGCAGCCAAGGAAACTGCACATCTCAATGGTGTGTTTTGTG
 
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rJMSF050M13+          TACTGTAGACTGTAGTTGAACACTGAATTGCCCATGTTTGGGATAGCTATAACAGGGGAA
rJMFF029O20+          TACTGTAGACTGTAGTTGAACACTGAATTGCCCATGTTTGGGATAGCTATAACAGGGGAA
                      ____________________________________________________________
consensus             TACTGTAGACTGTAGTTGAACACTGAATTGCCCATGTTTGGGATAGCTATAACAGGGGAA
 
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rJMSF050M13+          GGGTGTAAAAGGTGGTGTTGGAACTGTTGAACCAATT                       
rJMFF029O20+          AGGTGTAAAAGGTGGTGTTGGAACTGTTGAACCAATTATTCATTCAAGTATAATTCACCT
                      ____________________________________________________________
consensus             GGGTGTAAAAGGTGGTGTTGGAACTGTTGAACCAATTATTCATTCAAGTATAATTCACCT