Contig 009712:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF010L06+                                                         TACTACAATCAAT
                      ____________________________________________________________
consensus                                                            TACTACAATCAAT
 
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rJMSF010L06+          CCGGTCCTNTGCTGCCGGTACTTTGCAATCCCTACAATGCTGACTTGACTGATCGAGCAT
                      ____________________________________________________________
consensus             CCGGTCCTNTGCTGCCGGTACTTTGCAATCCCTACAATGCTGACTTGACTGATCGAGCAT
 
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rJMSF010L06+          GCAATNCCGGAGAAGCTCACTTGAGAAATGCAACAAAGGTGTGGAGATCCAGTGTATGCC
                      ____________________________________________________________
consensus             GCAATNCCGGAGAAGCTCACTTGAGAAATGCAACAAAGGTGTGGAGATCCAGTGTATGCC
 
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rJMSF010L06+          AAGTCTCGCCTAGCGACATATGCATAACAACAGGGCGTCTGACTCCGAAAATNTACGGCC
rJMSF030D02+                                                      CCGAAAATCTNCGGCC
rJMFF027M01+                          CATATGCATAACAACAGGGCGTNTGACTCCGAAAATTTACGGCC
                      ____________________________________________________________
consensus             AAGTCTCGCCTAGCGACATATGCATAACAACAGGGCGTCTGACTCCGAAAATTTACGGCC
 
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rJMSF010L06+          AAATGGCTGCCGCCGTGAACGTGAGCTTCGGGCTGTACCATTACGGCCAGTTCCTGGTCG
rJMSF030D02+          AAATGGCTGCCGCCGTGAACGTGAGCTTCGGGCTGTACCATTACGGCCAGTTCCTGGTCG
rJMFF027M01+          AAATGGCTGCCGCCGTGAACGTGAGCTTCGGGCTGTACCATTNCGGCCAGTTCCTGGTCG
                      ____________________________________________________________
consensus             AAATGGCTGCCGCCGTGAACGTGAGCTTCGGGCTGTACCATTACGGCCAGTTCCTGGTCG
 
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rJMSF010L06+          ATNTGCAAGACTGCGATTTCGTCAGAGTTACTTTCAACAAAATATACACAACGCACTGCC
rJMSF030D02+          ATNTGCAAGACTGCGATTTNGTCAGAGTTACTTTCAACAAAATATACNCAACGCNCTGCC
rJMFF027M01+          ATNTGCAAGACTGCGATTTCGTCAGAGTTACTTTCAACAAAATATACNCAACGCNCTGCC
                      ____________________________________________________________
consensus             ATNTGCAAGACTGCGATTTCGTCAGAGTTACTTTCAACAAAATATACACAACGCACTGCC
 
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rJMSF010L06+          CTGGCTTGCGGCGCTACAGCCAGTGGGTTTATATTGGACTGGTAATTGTGGCTGTTGCAG
rJMSF030D02+          CTGGCTTGCGGCGCTACAGCCNGTGGGTTTACNTTGGACTGGTAATTGTGGCTGTTGCAG
rJMFF027M01+          CTGGCTTGCGGCGNTACAGCCAGTGGGTTTACATTGGACTGGTAATTGTGGCTGTTGCAG
                      ____________________________________________________________
consensus             CTGGCTTGCGGCGCTACAGCCAGTGGGTTTACATTGGACTGGTAATTGTGGCTGTTGCAG
 
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rJMSF010L06+          TCATGTTCTCTCTCACTTTCTGGGTCATCTATGGAAGAGAGAGGCGGCACCGCGTNTACA
rJMSF030D02+          TCATGTTCTCTCTCACTTTNTGGGTCATCTATGGAAGAGAGAGGCGGCNCCGCGTNTACN
rJMFF027M01+          TCATGTTNTNTNTCNCTTTNTGGGTCATNTATGGAAGAGAGAGGCGGCNCCGCGTTTACN
                      ____________________________________________________________
consensus             TCATGTTCTCTCTCACTTTCTGGGTCATCTATGGAAGAGAGAGGCGGCACCGCGTTTACA
 
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rJMSF010L06+          CGAAAGAGCATAACCCGACGAGGGAAGGCTTTGGAAGGGAGAAATATATGGGATAGTGAT
rJMSF030D02+          CGAAAGAGCATAACCCGACGAGGGAAGGCTTTGGAAGGGAGAAATATATGGGATAGTGAT
rJMFF027M01+          CGAAAGAGCATAACCCGACGAGGGAAGGCTTTGGAAGGGAGAAATATATGGGATAGTGAT
                      ____________________________________________________________
consensus             CGAAAGAGCATAACCCGACGAGGGAAGGCTTTGGAAGGGAGAAATATATGGGATAGTGAT
 
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rJMSF010L06+          CTGCCTGCATATATGCATAATCTTCTTGCTGTGTATCATACNCTGTTTGTGTTTGTGTGT
rJMSF030D02+          CTGCCTGCATATATGCATAATNTTCTTGCTGTGTATCATACNCTGTTTGNGTTTGTGTGN
rJMFF027M01+          NTGCCTGCATATATGCATAATNTTCTTGCTGTGTATCATACNCTGTTTGTGTTTGTGTGT
                      ____________________________________________________________
consensus             CTGCCTGCATATATGCATAATCTTCTTGCTGTGTATCATACNCTGTTTGTGTTTGTGTGT
 
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rJMSF010L06+          GCATATGGATGCAG-TTTTTTTTTTGGAAGCTTATTAGGCTGTTTTCTGGGTTGTAAGTT
rJMSF030D02+          GCATATGAATGCNGTTTTTTTTTTTGGAAGTTTATTAGGCTGTTTTCTGGGTTGTAAGTT
rJMFF027M01+          GCATATGAATGCAGTTTTTTTTTTTGGAAGCTTATTAGGCTGTTTTCTGGGTTGTAAGTT
                      ____________________________________________________________
consensus             GCATATGAATGCAGTTTTTTTTTTTGGAAGCTTATTAGGCTGTTTTCTGGGTTGTAAGTT
 
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rJMSF010L06+          GTAACCAAATTTAGCTTTATCACTAGACTGTTGCAACCATTAGGCCTCAAGAGCTGATAG
rJMSF030D02+          GTAACCAAATTTAGCTTTATCACTAGACTGTTGCAACCATTAGGCCTCAAGAGCTGATAG
rJMFF027M01+          GTAACCAAATTTAGCTTTATCACTAGACTGTTGCAACCATTAGGCCTCAAGAGCTGATAG
                      ____________________________________________________________
consensus             GTAACCAAATTTAGCTTTATCACTAGACTGTTGCAACCATTAGGCCTCAAGAGCTGATAG
 
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rJMSF010L06+          ATACAGAGATTGTTTATATGTACTTCCAACAACCTT                        
rJMSF030D02+          ATACAGAGATTGTTTATATGTACTTCCAACAACCTT                        
rJMFF027M01+          ATACAGAGATTGTTTATATGTACTTCCAACAACCTTTGTTACCATAATCTTACAACAAAG
                      ____________________________________________________________
consensus             ATACAGAGATTGTTTATATGTACTTCCAACAACCTTTGTTACCATAATCTTACAACAAAG