| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002G05 | Sequence | 462 | 009711 (8) | ref|XP_009597452.1| | 108 | PREDICTED: uncharacterized protein LOC104093419 [Nicotiana tomentosiformis] | 735 | 009711 (8) | gb|KDP44049.1| | 5e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
| JMFF006A07 | Sequence | 470 | 009711 (8) | ref|XP_009597452.1| | 65.5 | PREDICTED: uncharacterized protein LOC104093419 [Nicotiana tomentosiformis] | 710 | 009711 (8) | gb|KDP44049.1| | 4e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
| JMFF027H17 | Sequence | 544 | 009711 (8) | ref|XP_004241275.1| | 99.8 | PREDICTED: uncharacterized protein LOC101262623 [Solanum lycopersicum] | 751 | 009711 (8) | gb|KDP44049.1| | 6e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
| JMSF011O13 | Sequence | 215 | 009711 (8) | 778 | 009711 (8) | gb|KDP44049.1| | 8e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] | |||
This contig is upended
. : . : . : . : . : . :
JMSF011O13- GGGTAGTTAGTATGGTAGGCTACAGATATAGGGGTTC
JMFF006A07- TAGTTAGTATGGTAGGCTACAGATATAGGGGTTC
JMFF002G05- TAGTTAGTATGGTAGGCTACAGATATAGGGGTTC
JMFF027H17- TAGTTAGTTTGGTAGGCTACAGATATAGGGGTTC
rJMSF011O13+ GTAGGCTACAGATATAGGGGTTC
____________________________________________________________
consensus GGGTAGTTAGTATGGTAGGCTACAGATATAGGGGTTC
. : . : . : . : . : . :
JMSF011O13- AGAGAGAGGGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
JMFF006A07- AGAGAGAGGGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
JMFF002G05- AGAGAGAGGGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
JMFF027H17- AGAGAGAGGGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
rJMSF011O13+ AGAGAGA-GGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
rJMFF006A07+ TTCGTGTA
rJMFF002G05+ TCTGTAGGAAGAAGANCAGCGTTTATTCGTGTA
rJMFF027H17+ CTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
____________________________________________________________
consensus AGAGAGAGGGTTAGAGAATTCATTGTATCTGTAGGAAGAAGAACAGCGTTTATTCGTGTA
. : . : . : . : . : . :
JMSF011O13- AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
JMFF006A07- AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
JMFF002G05- AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
JMFF027H17- AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
rJMSF011O13+ AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
rJMFF006A07+ AAAGTATATGATCTCAATCTCTATTTATCTCTGNTTATAAGAATCGATTGGCGTGTGATT
rJMFF002G05+ AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
rJMFF027H17+ AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
____________________________________________________________
consensus AAAGTATATGATCTCAATCTCTATTTATCTCTGTTTATAAGAATCGATTGGCGTGTGATT
. : . : . : . : . : . :
JMSF011O13- CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGAC
JMFF006A07- CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
JMFF002G05- CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
JMFF027H17- CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
rJMSF011O13+ CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
rJMFF006A07+ CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
rJMFF002G05+ CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
rJMFF027H17+ CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
____________________________________________________________
consensus CTGCAATGGCTGCATCGAGGAGCTATTTCCCGAGGAATAACTACCGGTTCCTGTCGACTG
. : . : . : . : . : . :
JMFF006A07- ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
JMFF002G05- ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
JMFF027H17- ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
rJMSF011O13+ ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
rJMFF006A07+ ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
rJMFF002G05+ ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
rJMFF027H17+ ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
____________________________________________________________
consensus ACCGCGAGGCGCCGATCGGTGGCGACTCCGTGTTTGAATTTGAGGAGTCGGAGGTGTGGA
. : . : . : . : . : . :
JMFF006A07- ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
JMFF002G05- ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
JMFF027H17- ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
rJMSF011O13+ ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
rJMFF006A07+ ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
rJMFF002G05+ ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
rJMFF027H17+ ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
____________________________________________________________
consensus ACGCGGCTCACTCCGCCTCTCCGGAGCGCCGGAAGGCGATTCCGAGTTCTCGCGCGAGGA
. : . : . : . : . : . :
JMFF006A07- AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGCGGGCGCCGGGGTCCCTGCCGGTG
JMFF002G05- AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
JMFF027H17- AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
rJMSF011O13+ AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
rJMFF006A07+ AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
rJMFF002G05+ AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
rJMFF027H17+ AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
____________________________________________________________
consensus AACCGTCGGCCGTGAGCGGCACGCGCGTGGTCGGAGC-GGCGCCGGGGTCCCTGCCGGTG
. : . : . : . : . : . :
JMFF006A07- AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGGAGGGAC
JMFF002G05- AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGNCGGAGGGAC
JMFF027H17- AACGTTCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGTAGGGAC
rJMSF011O13+ AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGGAGGGAC
rJMFF006A07+ AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGGAGGGAC
rJMFF002G05+ AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGGAGGGAC
rJMFF027H17+ AACGTTCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGTAGGGAC
____________________________________________________________
consensus AACGTGCCGGACTGGTCGAAGATACTGAAGGACGAGTACAGGGAGAACCGGCGGAGGGAC
. : . : . : . : . : . :
JMFF006A07- TGCNACGATGATTTC
JMFF002G05- TGCGACGA
JMFF027H17- TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
rJMSF011O13+ TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
rJMFF006A07+ TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
rJMFF002G05+ TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
rJMFF027H17+ TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
____________________________________________________________
consensus TGCGACGATGATTTCGACGACGAGGAGGAGGACGGCGGCGGCGACGGTGGCGATCGGGTC
. : . : . : . : . : . :
JMFF027H17- CCGCCGCACGAGTTCGTGGCGCAGCAGTTG
rJMSF011O13+ CCGCCGCACGAGTTCGTGGCGCAGCAGTTGGCGAGGACTCGAATCGCCTCCTTCTCGGTG
rJMFF006A07+ CCGCCGCACGAGTTCGTGGCGCAGCAGTTGGCGAGGACTCGAATCGCCTCCTTCTCGGTG
rJMFF002G05+ CCGCCGCACGAGTTCGTGGCGCAGCAGTTGGCGAGGACTCGAATCGCCTCCTTCTCGGTG
rJMFF027H17+ CCGCCGCACGAGTTCGTGGCGCAGCAGTTGGCGAGGACTCGAATCGCCTCCTTCTCGGTG
____________________________________________________________
consensus CCGCCGCACGAGTTCGTGGCGCAGCAGTTGGCGAGGACTCGAATCGCCTCCTTCTCGGTG
. : . : . : . : . : . :
rJMSF011O13+ CACGAGGGCATCGGGCGCACCCTCAAAGGCAGAGACCTGAGTAGAGTCCGCAACGCGATT
rJMFF006A07+ CACGAGGGCATCGGGCGCACCCTCAAAGGCAGAGACCTGAGTAGAGTCCGCAACGCGATT
rJMFF002G05+ CACGAGGGCATCGGGCGCACCCTCAAAGGCAGAGACCTGAGTAGAGTCCGCAACGCGATT
rJMFF027H17+ CACGAGGGCATCGGGCGCACCCTCAAAGGCAGAGACCTGAGTAGAGTCCGCAACGCGATT
____________________________________________________________
consensus CACGAGGGCATCGGGCGCACCCTCAAAGGCAGAGACCTGAGTAGAGTCCGCAACGCGATT
. : . : . : . : . : . :
rJMSF011O13+ TGGAAGAAAACCGGTTTCGAAGACTAACCTAACTGGAGGCGAGGATTGATTTTCCTTTTT
rJMFF006A07+ TGGAAGAAAACCGGTTTCGAAGACTAACCTAACTGGAGGCGAGGATTGATTTTCCTTTTT
rJMFF002G05+ TGGAAGAAAACCGGTTTCGAAGACTAACCTAACTGGAGGCGAGGATTGATTTTCCTTTTT
rJMFF027H17+ TGGAAGAAAACCGGTTTCGAAGACTAACCTAACTGGAGGCGAGGATTGATTTTCCTTTTT
____________________________________________________________
consensus TGGAAGAAAACCGGTTTCGAAGACTAACCTAACTGGAGGCGAGGATTGATTTTCCTTTTT
. : . : . : . : . : . :
rJMSF011O13+ CGTTTTCAAATTTTCCGCTTCCATATTTCCGGATTTTGATTTTTATTTATTTCTCGGAAG
rJMFF006A07+ CGTTTTCAAATTTTCCGCTTCCATATTTCCGGATTTTGATTTTTATTTATTTCTCGGAAG
rJMFF002G05+ CGTTTTCAAATTTTCCGCTTCCATATTTCCGGATTTTGATTTTTATTTATTTCTCGGAAG
rJMFF027H17+ CGTTTTCAAATTTTCCGCTTCCATATTTCCGGATTTTGATTTTTATTTATTTCTCGGAAG
____________________________________________________________
consensus CGTTTTCAAATTTTCCGCTTCCATATTTCCGGATTTTGATTTTTATTTATTTCTCGGAAG
. : . : . : . : . : . :
rJMSF011O13+ TGAACTGCCTA
rJMFF006A07+ TGAACTGCCTAGCGGAAACGGATTACACGCATGTAATCGTAAC
rJMFF002G05+ TGAACTGCCTAGCGGAAACGGATTACACGCATGTAATCGTAAC
rJMFF027H17+ TGAACTGCCTAGCGGAAACGGATTACACGCATGTAATCGTAACGTTAAGGAGATAAAAAT
____________________________________________________________
consensus TGAACTGCCTAGCGGAAACGGATTACACGCATGTAATCGTAACGTTAAGGAGATAAAAAT