| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027F07 | Sequence | 327 | 012132 (3) | ref|XP_009621480.1| | 2e-22 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 768 | 009709 (3) | ref|XP_009621480.1| | 8e-54 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
| JMSF041N01 | Sequence | 750 | 012132 (3) | ref|XP_006341036.1| | 3e-116 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum] | 671 | 009709 (3) | ref|XP_009621480.1| | 9e-43 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
| JMSF043I15 | Sequence | 780 | 012132 (3) | ref|XP_006341036.1| | 5e-125 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum] | 690 | 009709 (3) | ref|XP_009621480.1| | 2e-48 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
rJMFF027F07+ TTTGAAGGAGACAAGCTACGCTTCACCTTTGCATTGTGATTCGGACAATGAG
____________________________________________________________
consensus TTTGAAGGAGACAAGCTACGCTTCACCTTTGCATTGTGATTCGGACAATGAG
. : . : . : . : . : . :
rJMSF043I15+ GCGATTTGNACCTATGCNGCATNTGCTTTGAGCAGGNGTGTNCTAT
rJMFF027F07+ GACTTCGAGGTCAGGCGATTTGGACCTATGCTGCATCTGCTTTGAGCAGGCGTGTACTAT
____________________________________________________________
consensus GACTTCGAGGTCAGGCGATTTGGACCTATGCTGCATCTGCTTTGAGCAGGCGTGTACTAT
. : . : . : . : . : . :
rJMSF041N01+ AAAATGCGGGCACCAAATGTGTGCACATTGTACTCTAGCTTTGTGTTGCCA
rJMSF043I15+ AGAGATACAAAAATGCGGGCNCCAAATGTGTGCACATTGTACTCTAGCTNNGTGTTGNCA
rJMFF027F07+ AGAGATACAAAAATGCGGGCACCAAATGTGTGCACATTGTACTCTAGCTTTGTGTTGCCA
____________________________________________________________
consensus AGAGATACAAAAATGCGGGCACCAAATGTGTGCACATTGTACTCTAGCTTTGTGTTGCCA
. : . : . : . : . : . :
rJMSF041N01+ CAACAAACCTAATCCGACCAAGAAGTGCGACAAAGTTCCCACATGTCCCTTTTGCCGGAG
rJMSF043I15+ CAACAAACCTAATCCGACCAAGAAGTGCGACAAAGTTCCCACANGTCCCTTTTGCCGGAG
rJMFF027F07+ CAACAAACCTAATCCGACCAAGAAGTGCGACAAAGTTCCCACATGTCCCTTTTGCCGGAG
____________________________________________________________
consensus CAACAAACCTAATCCGACCAAGAAGTGCGACAAAGTTCCCACATGTCCCTTTTGCCGGAG
. : . : . : . : . : . :
rJMSF041N01+ CAGCATTACTCAGCTAGTCATTGCCAAGAACAAGACCGAAAACAAATTAGAAGAATTGAG
rJMSF043I15+ CAGCATTACTCAGCTAGTCATTGCCAAGAACAAGACCGAAAACAAATTAGAAGAATTGAG
rJMFF027F07+ CAGCATTACTCAGCTAGTCATTGCCAAGAACAAGACCGAAAACAAATTAGAAGAATTGAG
____________________________________________________________
consensus CAGCATTACTCAGCTAGTCATTGCCAAGAACAAGACCGAAAACAAATTAGAAGAATTGAG
. : . : . : . : . : . :
rJMSF041N01+ CCCATCTAGGTCAAGAATGTCAAGAACGTCATTCAACCTAGCTGAGGATGGTTGCGGTGG
rJMSF043I15+ CCCATCTAGGTCAAGAATGTCAAGAACGTCATTCAACCTAGCTGAGGATGGTTGCGGTGG
rJMFF027F07+ CCCATCTAGGTCAAGAATGTCAAGAACGTCATTCAACCTAGCTGAGGATGGTTGCGGTGG
____________________________________________________________
consensus CCCATCTAGGTCAAGAATGTCAAGAACGTCATTCAACCTAGCTGAGGATGGTTGCGGTGG
. : . : . : . : . : . :
rJMSF041N01+ CAGCAGTAGCAGCAGCAACACCTTCAAGGTTTTGTCACCTTTGGCCTCGTTTGCTAAGCT
rJMSF043I15+ CAGCAGTAGCAGCAGCAACACCTTCAAGGTTTTGTCACCTTTGGCCTCGTTTGNTAAGCT
rJMFF027F07+ CAGCAGTAGCAGCAGCAACACCTTCAAGGTTTTGTCACCTTTGGCCTCGTTTGCTAAGCT
____________________________________________________________
consensus CAGCAGTAGCAGCAGCAACACCTTCAAGGTTTTGTCACCTTTGGCCTCGTTTGCTAAGCT
. : . : . : . : . : . :
rJMSF041N01+ TGGCGGCCGCAGTTCAGGTAAGGTGACTATCGATTGCATTGAGGGATTCAATAAGCCATA
rJMSF043I15+ TGGCGGCCGCAGTTCAGGTAAGGTGACTATCGATTGCATTGAGGGATTCAATAAGCCATA
rJMFF027F07+ TGGCGGCCGCAGTTCAGGTAAGGTGACTATCGATTGCATTGAGGGATTCAATAAGCCATA
____________________________________________________________
consensus TGGCGGCCGCAGTTCAGGTAAGGTGACTATCGATTGCATTGAGGGATTCAATAAGCCATA
. : . : . : . : . : . :
rJMSF041N01+ ACATCGGGTTATTCCCTTTGCATCCCCGCCTTTTTGGAATCTGGTCAGTCCTACCTGGTA
rJMSF043I15+ ACATCGGGTTATTCCCTTTGCATCCCCGCCTTTTTGGAATNTGGTCAGTCCTACCTGGTA
rJMFF027F07+ ACATCGGGTTATTCCCTTTGCATCCCCGCCTTTTTGGAATCTGGTCAGTCCTACCTGGTA
____________________________________________________________
consensus ACATCGGGTTATTCCCTTTGCATCCCCGCCTTTTTGGAATCTGGTCAGTCCTACCTGGTA
. : . : . : . : . : . :
rJMSF041N01+ TGCATTCAACAAATCGGGATCCTAATGGAACCTCAACTATTGATATATGCATCAAGTAGG
rJMSF043I15+ TGCATTCAACAAATCGGGATCCTAATGGAACCTCAACTATTGATATATGCATCAAGTAGG
rJMFF027F07+ TGCATTCAACAAATCGGGATCCTAATGGAACCTCAACTATTG--ATATGCATCAAGTAGG
____________________________________________________________
consensus TGCATTCAACAAATCGGGATCCTAATGGAACCTCAACTATTGATATATGCATCAAGTAGG
. : . : . : . : . : . :
rJMSF041N01+ AGTATCTATATCCTAAGATGCCCCTCAAGCAAGAGAATATATATATATATACATGTATTT
rJMSF043I15+ AGTATCTATATCCTAAGATGCCCCTCAAGCAAGAGAATATATATATATATACATGTATTT
rJMFF027F07+ AGTATCTATATCCTAAGATGCCCCTCAAGCAAGAGAA--TATATATATATACATGTATTT
____________________________________________________________
consensus AGTATCTATATCCTAAGATGCCCCTCAAGCAAGAGAATATATATATATATACATGTATTT
. : . : . : . : . : . :
rJMSF041N01+ GGCCTAAATCCAACCAAGAAAATATGAGCATGGAAAGGCCTATTAGCTATTTATCTGTCA
rJMSF043I15+ GGCCTAAATCCAACCAAGAAAATATGAGTATGGAAAGGCCTATTAGCTATTTATCTGTCA
rJMFF027F07+ GGCCTAAATCCAACCAAGAAAATATGAGTATGGAAAGGCCTATTAGCTATTTATCTGTCA
____________________________________________________________
consensus GGCCTAAATCCAACCAAGAAAATATGAGTATGGAAAGGCCTATTAGCTATTTATCTGTCA
. : . : . : . : . : . :
rJMSF041N01+ CCTATATTTTTTCCTCTGAAGAGATGTATTATT
rJMSF043I15+ CCTATATTTTTTCCTCTGAAGAGATGT
rJMFF027F07+ CCTATATTTTTTCCTCTGAAGAGATGTATTATTTGAACTGCTTCAATGGAAGCCCCACTA
____________________________________________________________
consensus CCTATATTTTTTCCTCTGAAGAGATGTATTATTTGAACTGCTTCAATGGAAGCCCCACTA