| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027C09 | Sequence | 611 | 009708 (8) | emb|CDP04919.1| | 4e-53 | unnamed protein product [Coffea canephora] | 738 | 009708 (8) | emb|CDP04919.1| | 2e-52 | unnamed protein product [Coffea canephora] |
| JMSF007M17 | Sequence | 334 | 009708 (8) | ref|XP_006347599.1| | 74.7 | PREDICTED: uncharacterized protein LOC102589329 [Solanum tuberosum] | 668 | 009708 (8) | emb|CDP04919.1| | 2e-49 | unnamed protein product [Coffea canephora] |
| JMSF015F22 | Sequence | 238 | 007749 (5) | ref|XP_010514293.1| | 9e-10 | PREDICTED: cytochrome P450 71B26-like [Camelina sativa] | 732 | 009708 (8) | emb|CDP04919.1| | 2e-52 | unnamed protein product [Coffea canephora] |
| JMSF029A02 | Sequence | 683 | 009708 (8) | emb|CDP04919.1| | 9e-53 | unnamed protein product [Coffea canephora] | 707 | 009708 (8) | emb|CDP04919.1| | 1e-52 | unnamed protein product [Coffea canephora] |
| JMSF045J21 | Sequence | 761 | 009708 (8) | emb|CDP04919.1| | 1e-51 | unnamed protein product [Coffea canephora] | 715 | 002110 (26) | emb|CBI17302.3| | 3e-96 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF007M17- GAAGATTTCAGCAGAGTACACAAGGGCATAAGGTTGTCACTCCGACGGA
JMSF029A02- AGAGTACACAAGGGCATAAGGTTGTCACTCCGACGGA
JMSF045J21- ACTCCGACGGA
____________________________________________________________
consensus GAAGATTTCAGCAGAGTACACAAGGGCATAAGGTTGTCACTCCGACGGA
. : . : . : . : . : . :
JMSF007M17- AGTTTCACGATAAGCTCTCAAATCTCTTTCTGTCCTTCAGCCTCAGCTCCGATTGCTAGC
JMFF027C09- TAAGCTCTCAAATCTCTTTCTGTCCTTCAGCCTCAGCTCCGATTGCTAGC
JMSF029A02- AGTTTCACGATAAGCTCTCAAATCTCTTTCTGTCCTTCAGCCTCAGCTCCGATTGCTAGC
JMSF045J21- AGTTTCACGATAAGCTCTCAAATCTCTTTCTGTCCTTCAGCCTCAGCTCCGATTGCTAGC
rJMSF015F22+ TCCTTCAGCCTCAGCTCCGATTGCTAGC
rJMFF027C09+ TCAGCTCCGATTGCTAGC
____________________________________________________________
consensus AGTTTCACGATAAGCTCTCAAATCTCTTTCTGTCCTTCAGCCTCAGCTCCGATTGCTAGC
. : . : . : . : . : . :
JMSF007M17- TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
JMFF027C09- TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
JMSF029A02- TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
JMSF045J21- TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
rJMSF015F22+ TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
rJMSF007M17+ AGGTCCAACTCATCTCAAGAAATA
rJMSF029A02+ ATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
rJMFF027C09+ TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
____________________________________________________________
consensus TCCCATGGCGACTGGCTTAGCCTTTTCAACTCTCTCAGGTCCAACTCATCTCAAGAAATA
. : . : . : . : . : . :
JMSF007M17- TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
JMFF027C09- TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
JMSF029A02- TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
JMSF045J21- TGGAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
rJMSF015F22+ TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
rJMSF007M17+ TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
rJMSF029A02+ TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
rJMFF027C09+ TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
____________________________________________________________
consensus TGAAGCTTGGTCTGCTAAGTCCTCTTCATTTGTCAGGACACCAGTATTGATAAATCAGAG
. : . : . : . : . : . :
JMSF007M17- GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
JMFF027C09- GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
JMSF029A02- GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
JMSF045J21- GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
rJMSF015F22+ GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
rJMSF007M17+ GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
rJMSF029A02+ GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
rJMFF027C09+ GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
____________________________________________________________
consensus GAAATTGGTTCATCAGAGAACGAATAACAACTTCTCTATTCGTGCACGCTACAATGATCA
. : . : . : . : . : . :
JMSF007M17- GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGG
JMFF027C09- GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
JMSF029A02- GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
JMSF045J21- GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
rJMSF015F22+ GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
rJMSF007M17+ GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
rJMSF029A02+ GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
rJMFF027C09+ GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
____________________________________________________________
consensus GAGAGGTGGAGGTGAAGGTGATTTTATTGCTGGATTTCTGTTGGGAGGTGCAATTTTTGG
. : . : . : . : . : . :
JMFF027C09- AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
JMSF029A02- AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
JMSF045J21- AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
rJMSF015F22+ AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
rJMSF007M17+ AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
rJMSF029A02+ AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
rJMFF027C09+ AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
____________________________________________________________
consensus AGCACTTGGCTATGTTTTTGCCCCACAGATAAGAAGAACAATCCTAAATGAGAATGAATA
. : . : . : . : . : . :
JMFF027C09- TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
JMSF029A02- TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
JMSF045J21- TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
rJMSF015F22+ TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
rJMSF007M17+ TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
rJMSF029A02+ TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
rJMFF027C09+ TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
____________________________________________________________
consensus TGGTTTCCGGAGGGCAAGGCGACCAATATACTATGACGATGGTTTAGAGAGAACTAGGGA
. : . : . : . : . : . :
JMFF027C09- AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
JMSF029A02- AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
JMSF045J21- AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
rJMSF015F22+ AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
rJMSF007M17+ AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
rJMSF029A02+ AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
rJMFF027C09+ AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
____________________________________________________________
consensus AACCTTGAATGAAAAGATACACCAACTCAATTCTGCTATTGACAATGTGTCTTCCCGGCT
. : . : . : . : . : . :
JMFF027C09- GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
JMSF029A02- GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
JMSF045J21- GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
rJMSF015F22+ GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
rJMSF007M17+ GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
rJMSF029A02+ GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
rJMFF027C09+ GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
____________________________________________________________
consensus GATGAGAGGTGGCAAAACCATGCCCCCGGTGCCCCTTGAGACTGATCCAGAAGAAGCCAC
. : . : . : . : . : . :
JMFF027C09- TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
JMSF029A02- TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
JMSF045J21- TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
rJMSF015F22+ TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
rJMSF007M17+ TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
rJMSF029A02+ TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
rJMFF027C09+ TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
____________________________________________________________
consensus TATGTAAGAGCAGCCAGCCAGCTTGCTCGTCTCTGGGAATGGTGATTTGTTGATCCAGTC
. : . : . : . : . : . :
JMFF027C09- AGTCGGGCAAACGCTGTGG
JMSF029A02- AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATNAAGTGG
JMSF045J21- AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
rJMSF015F22+ AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
rJMSF007M17+ AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
rJMSF029A02+ AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
rJMFF027C09+ AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
____________________________________________________________
consensus AGTCGGGCAAACGCTGTGGAATAATATAAATTTTTAATTAAGTGGAACAGCATATTAATA
. : . : . : . : . : . :
JMSF045J21- TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
rJMSF015F22+ TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
rJMSF007M17+ TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
rJMSF029A02+ TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
rJMFF027C09+ TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
____________________________________________________________
consensus TTTGATTGATACATGAACTTGAGTAAAACATGATGTCTTGAATTATTTTAATGTAGTAAT
. : . : . : . : . : . :
JMSF045J21- AGGGCATTGGATTGTTGAAGTGTGAT
rJMSF015F22+ AGGGCATTGGATTGTTGAAGTGTGATTAAGCCCCATACACAAAC
rJMSF007M17+ AGGGCATTGGATTGTTGAAGTGTGATTAAGCCCCATACACAAAC
rJMSF029A02+ AGGGCATTGGATTGTTGAAGTGTGATTAAGCCCCATACACAAAC
rJMFF027C09+ AGGGCATTGGATTGTTGAAGTGTGATTAAGCCCCATACACAAACACCAATTGTTATACCA
____________________________________________________________
consensus AGGGCATTGGATTGTTGAAGTGTGATTAAGCCCCATACACAAACACCAATTGTTATACCA