Contig 009705:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026J08Sequence447000142 (2)ref|XP_010677456.1|2e-07PREDICTED: cadmium-induced protein AS8 [Beta vulgaris subsp. vulgaris]505009705 (2)
JMSF044M18Sequence674000142 (2)ref|XP_002264384.1|2e-18PREDICTED: cadmium-induced protein AS8 isoform X2 [Vitis vinifera] ref|XP_010648710009705 (2)ref|XP_002264384.1|2e-18PREDICTED: cadmium-induced protein AS8 isoform X2 [Vitis vinifera] ref|XP_010648

Alignment

This contig is upended


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rJMSF044M18+              TCCTGAGGTGATTGGTTATGTTGGAGCAGGCTGCGGTGCCCGGGTTTAGTGTGGGG
                      ____________________________________________________________
consensus                 TCCTGAGGTGATTGGTTATGTTGGAGCAGGCTGCGGTGCCCGGGTTTAGTGTGGGG
 
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rJMSF044M18+          AATCACTCTGGCTGGATTAGGGATTGGGCTTCCTGCCAATGACTTCTTCACAGCTCCTTT
                      ____________________________________________________________
consensus             AATCACTCTGGCTGGATTAGGGATTGGGCTTCCTGCCAATGACTTCTTCACAGCTCCTTT
 
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rJMSF044M18+          AAATGCATTCATGGCTACGAGAAGTGGTGCTTTAGATGTTGCTCGATCGAGTGGTCTACT
                      ____________________________________________________________
consensus             AAATGCATTCATGGCTACGAGAAGTGGTGCTTTAGATGTTGCTCGATCGAGTGGTCTACT
 
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rJMSF044M18+          GAGCATCCGAAATGATGGCAGGGAGGGTTGGTTTAACTTGGATCCACAGATTTCTGGTTT
                      ____________________________________________________________
consensus             GAGCATCCGAAATGATGGCAGGGAGGGTTGGTTTAACTTGGATCCACAGATTTCTGGTTT
 
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rJMSF044M18+          GCAGCAGAAAATAGGAGGGGCATTTTCTACCTTAACAGCGAAAGATTCTTTGAAGAATGC
rJMFF026J08+                                                 GAAAGATTCTTTGAAGAATNC
                      ____________________________________________________________
consensus             GCAGCAGAAAATAGGAGGGGCATTTTCTACCTTAACAGCGAAAGATTCTTTGAAGAATGC
 
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rJMSF044M18+          CATAGATTTCGCTGACTTGAAAACCCAAAGTTTTTTGCTTACAAAAGGTCTTTTGGATCT
rJMFF026J08+          CATAGATTTCGNTGACTTGAAAACCCAAAGTTTNTTGNCTACAAAAGGTCTTNTGGATCG
                      ____________________________________________________________
consensus             CATAGATTTCGCTGACTTGAAAACCCAAAGTTTTTTGCTTACAAAAGGTCTTTTGGATCT
 
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rJMSF044M18+          AATGAAGACGAATAGCAAGAATGAAAGTGAAGGTTCAGAAGATGGATAGCGCGATGACAT
rJMFF026J08+          AATGAAGACGAATAGCAAGAATGAAAGTNAAGGTTCAGAAGANGGATAGNGNGATGACAT
                      ____________________________________________________________
consensus             AATGAAGACGAATAGCAAGAATGAAAGTGAAGGTTCAGAAGATGGATAGCGCGATGACAT
 
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rJMSF044M18+          TGTTGACTGTCATGTTATGAGTATTTGAATGGCTTTTTTCAAAACACACCGGCATACTTC
rJMFF026J08+          NGTTGACNGTCATGTTATGAGTATNTGAATGGCTTTTTTCAAAACACACCGGCATACTTN
                      ____________________________________________________________
consensus             TGTTGACTGTCATGTTATGAGTATTTGAATGGCTTTTTTCAAAACACACCGGCATACTTC
 
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rJMSF044M18+          TCCGTTTACTGGAGAAATTTTCCTCGAATAAACAAAGAAGAGAATACGTTACTTGTGCAT
rJMFF026J08+          TCCGTTTANTGGAGAAACTTTCCTCGAATAAACAAAGAAGAGAATACGTTNCTTGCGCAT
                      ____________________________________________________________
consensus             TCCGTTTACTGGAGAAATTTTCCTCGAATAAACAAAGAAGAGAATACGTTACTTGTGCAT
 
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rJMSF044M18+          TTGGAAAACAAAAACCGAAGATGAGAG-AAATGAAAAACAGTGAATTGAAGTAAACGCAG
rJMFF026J08+          TTGGAAAACAAAANCCGAAGANGAGAGAAAANGAAAAACAGTGAATTGAAGTANACGCAG
                      ____________________________________________________________
consensus             TTGGAAAACAAAAACCGAAGATGAGAGAAAATGAAAAACAGTGAATTGAAGTAAACGCAG
 
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rJMSF044M18+          TTGGTCATTTGTTTTCGTGTAATCTTCAAATTATTCCAATCTTGTCATTTTCCTTTTACA
rJMFF026J08+          TTGGTCATTTGTTTTCGNGTAATCTTCAAATTATTCCAATCTTGTCATTTTCCTTTTACA
                      ____________________________________________________________
consensus             TTGGTCATTTGTTTTCGTGTAATCTTCAAATTATTCCAATCTTGTCATTTTCCTTTTACA
 
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rJMSF044M18+          TGTTGCTTTTTTCTTCTGGCTTTATCATGTCTGCCACTTCTTGTAAAGTTTGCAA     
rJMFF026J08+          TGTTGCTTTTTTCTTCTGGCTTTATCATGTCTGCCACTTCTNGTAAAGNTTGCAATATCC
                      ____________________________________________________________
consensus             TGTTGCTTTTTTCTTCTGGCTTTATCATGTCTGCCACTTCTTGTAAAGTTTGCAATATCC
 
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rJMFF026J08+          ATATNGAAACAATGAAGACTGTAAAATTGAACCAATCCTTGGCAGACAACAGACATCAAT
                      ____________________________________________________________
consensus             ATATNGAAACAATGAAGACTGTAAAATTGAACCAATCCTTGGCAGACAACAGACATCAAT