Contig 009702:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M02Sequence521007432 (5)ref|XP_006366355.1|2e-79PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]766009702 (3)ref|XP_011094987.1|2e-49PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]
JMFF024N18Sequence490007432 (5)ref|XP_006366355.1|7e-71PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]764009702 (3)ref|XP_011094987.1|5e-51PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]
JMFF035L01Sequence618007432 (5)ref|XP_006366355.1|2e-97PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Solanum tuberosum]692009702 (3)ref|XP_011094987.1|4e-88PREDICTED: BTB/POZ domain-containing protein At3g09030 [Sesamum indicum]

Alignment

This contig is upended


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rJMFF035L01+                                            TCCGGATACGTGCGGTTATGGGACCC
                      ____________________________________________________________
consensus                                               TCCGGATACGTGCGGTTATGGGACCC
 
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rJMFF035L01+          GAGATCCGCGGAGGTGGTTTGGGAGACGAACGAGCCAGGCTCGGGCCGTAGCAGCAGGTT
                      ____________________________________________________________
consensus             GAGATCCGCGGAGGTGGTTTGGGAGACGAACGAGCCAGGCTCGGGCCGTAGCAGCAGGTT
 
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rJMFF035L01+          CGGAGACCCATTTGCCGACGTGGGGGTGGACCCAGAGGATTTGACTCTGTTCAAGATCTG
                      ____________________________________________________________
consensus             CGGAGACCCATTTGCCGACGTGGGGGTGGACCCAGAGGATTTGACTCTGTTCAAGATCTG
 
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rJMFF035L01+          CTCCAAGTCCGGCGACTTGGCAGTGGCAGACCTTCGGAAATTAAGCGATGACCCGTGGGT
rJMFF002M02+                              CAGTGGCAGACNTTCGGAAATTAAGCGATGACCCGTGGGT
rJMFF024N18+                              CAGTGGCAGACNTTCGGAAATTAAGCGATGACCCGTGGGT
                      ____________________________________________________________
consensus             CTCCAAGTCCGGCGACTTGGCAGTGGCAGACCTTCGGAAATTAAGCGATGACCCGTGGGT
 
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rJMFF035L01+          TTATTTGAAGGAGAAGAATCCCAGTATGAGGTATACAGGAAATTGTGATAGTTTGAGTAG
rJMFF002M02+          TTATTTGAAGGAGAAGAATCCCAGTATGAGGTATACAGGAAATTGTGATAGTTTGAGTAG
rJMFF024N18+          TTATTTGAAGGAGAAGAATCCCAGTATGAGGTATACAGGAAATTGTGATAGTTTGAGTAG
                      ____________________________________________________________
consensus             TTATTTGAAGGAGAAGAATCCCAGTATGAGGTATACAGGAAATTGTGATAGTTTGAGTAG
 
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rJMFF035L01+          TTTCTTAATCCATTGTTACAGAAAACAGGTGCTTGTGGGGAGAGAGGGGGAGTTGGAGGT
rJMFF002M02+          TTTCTTAATCCATTGTTACAGAAAACAGGTGTTTGTGGGGAGAGAGGGGGAGTTGGAGGT
rJMFF024N18+          TTTCTTAATCCATTGTTACAGAAAACAGGTGTTTGTGGGGAGAGAGGGGGAGTTGGAGGT
                      ____________________________________________________________
consensus             TTTCTTAATCCATTGTTACAGAAAACAGGTGTTTGTGGGGAGAGAGGGGGAGTTGGAGGT
 
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rJMFF035L01+          ATGGTCAAGAATCGAAGAAGCCCAGAATGAAGGGGATTTGTCAGAAGGAATGTACAGGAG
rJMFF002M02+          ATGGCCAAGAATCGAAGAAGCCCAGAATGAAGGGGATTTGTCAGAAGGAATGTACAGGAG
rJMFF024N18+          ATGGCCAAGAATCGAAGAAGCCCAGAATGAAGGGGATTTGTCAGAAGGAATGTACAGGAG
                      ____________________________________________________________
consensus             ATGGCCAAGAATCGAAGAAGCCCAGAATGAAGGGGATTTGTCAGAAGGAATGTACAGGAG
 
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rJMFF035L01+          AAACTATGTGGATAAAGTGGATGATTCAGAAAGAGGGACAATCAAGAAGATTGAAGGTGG
rJMFF002M02+          AAACTATGTGGATAAAGTGGATGATTCAGAAAGAGGGACAATCAAGAAGATTGAAGGTGG
rJMFF024N18+          AAACTATGTGGATAAAGTGGATGATTCAGAAAGAGGGACAATCAAGAAGATTGAAGGTGG
                      ____________________________________________________________
consensus             AAACTATGTGGATAAAGTGGATGATTCAGAAAGAGGGACAATCAAGAAGATTGAAGGTGG
 
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rJMFF035L01+          TGGAGATAGGCTATTTGTTACAAGAGAAAATACTGAGGGGATTGAGGTCTGGCAAAGTTC
rJMFF002M02+          TGGAGATAGGCTATTTGTTACAAGAGAAAATACTGAGGGGATTGAGGTCTGGCAAAGTTC
rJMFF024N18+          TGGAGATAGGCTATTTGTTACAAGAGAAAATACTGAGGGGATTGAGGTCTGGCAAAGTTC
                      ____________________________________________________________
consensus             TGGAGATAGGCTATTTGTTACAAGAGAAAATACTGAGGGGATTGAGGTCTGGCAAAGTTC
 
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rJMFF035L01+          CCATCTTTCTGGTGCAGTCATGGTTTCTTGAATGTATAGTGCTGGGAATCTGGGATTGTT
rJMFF002M02+          CCATTTTTCTGGTGCAGTCATGGTTTCTTGAATGTATAGTGCTGGGAATCTGGGATTGTT
rJMFF024N18+          CCATTTTTCTGGTGCAGTCATGGTTTCTTGAATGTATAGTGCTGGGAATCTGGGATTGTT
                      ____________________________________________________________
consensus             CCATTTTTCTGGTGCAGTCATGGTTTCTTGAATGTATAGTGCTGGGAATCTGGGATTGTT
 
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rJMFF035L01+          TGATCATTGAGAAAATGTTATCATGTTCACCAATCAAGAACAATGCACAGGGAGGTAGAG
rJMFF002M02+          TGATCATTGAGAAAATGTTATCATGTTCACCAATCAAGAACAATGCACAGGGAGGTAGAG
rJMFF024N18+          TGATCATTGAGAAAATGTTATCATGTTCACCAATCAAGAACAATGCACAGGGAGGTAGAG
                      ____________________________________________________________
consensus             TGATCATTGAGAAAATGTTATCATGTTCACCAATCAAGAACAATGCACAGGGAGGTAGAG
 
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rJMFF035L01+          TACTAGCTGCTGATCGAGATTCTTTGATCATTTGTTCACCAATGTTCCAAGTTTTGTCAA
rJMFF002M02+          TACTAGCTGCTGATCGAGATTCTTTGATCATTTGTTCACCAATGTTCCAAGTTTTGTCAA
rJMFF024N18+          TACTAGCTGCTGATCGAGATTCTTTGATCATTTGTTCACCAATGTTCCAAGTTTTGTCAA
                      ____________________________________________________________
consensus             TACTAGCTGCTGATCGAGATTCTTTGATCATTTGTTCACCAATGTTCCAAGTTTTGTCAA
 
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rJMFF035L01+          AG                                                          
rJMFF002M02+          AGATTAATCTATTCAAGAAGGCTGCAGCTTTCTTCCGCCTTTCCTTTTATCAACCTCATG
rJMFF024N18+          AGATTAATCTATTCAAGAAGGCTGCAGCTTTCTTCCGCCTTTCCTTTTATCAACCTCATG
                      ____________________________________________________________
consensus             AGATTAATCTATTCAAGAAGGCTGCAGCTTTCTTCCGCCTTTCCTTTTATCAACCTCATG
 
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rJMFF002M02+          GAATGGTTCAATACTGGCCTGCTGTTGCAGCCTTTAAACCTGCTCTGCTTATTCCTCAAA
rJMFF024N18+          GAATGGTTCAATACTGGCCTGCTGTTGCAGCCTTTAAACCTGCTCTGCTTATTCCTCAAA
                      ____________________________________________________________
consensus             GAATGGTTCAATACTGGCCTGCTGTTGCAGCCTTTAAACCTGCTCTGCTTATTCCTCAAA
 
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rJMFF002M02+          AGTGAACATTTCCAAGATTGTTTGAAAATGACTACCAGATTGTACTGATAAAAGTAGCTT
rJMFF024N18+          AGTGAACATTTCCAAGATTGTTTGAAAATGACTACCAGATTGTACTGATAAAAGTAGCTT
                      ____________________________________________________________
consensus             AGTGAACATTTCCAAGATTGTTTGAAAATGACTACCAGATTGTACTGATAAAAGTAGCTT
 
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rJMFF002M02+          ATCAGGCATCTCTCTCAATCATTGGAATATTGAATTGGATTATGCTGTCCATG       
rJMFF024N18+          ATCAGGCATCTCTCTCAATCATTGGAATATTGAATTGGATTATGCTGTCCATGATTTGGA
                      ____________________________________________________________
consensus             ATCAGGCATCTCTCTCAATCATTGGAATATTGAATTGGATTATGCTGTCCATGATTTGGA