Contig 009699:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023J10Sequence550009699 (5)ref|XP_009789476.1|9e-79PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Nicotiana 742009699 (5)ref|XP_011086175.1|2e-89PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Sesamum in
JMSF004N01Sequence370009699 (5)ref|XP_009789476.1|1e-26PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Nicotiana 381009699 (5)gb|KDP20895.1|2e-41hypothetical protein JCGZ_21366 [Jatropha curcas]
JMSF004N03Sequence398009699 (5)ref|XP_010057545.1|2e-24PREDICTED: vacuolar protein sorting-associated protein 28 homolog 1-like [Eucal

Alignment

This contig is upended


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JMSF004N01-                                                                  GCCCA
                      ____________________________________________________________
consensus                                                                    GCCCA
 
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JMSF004N01-           TTCCCCAGGACCCCCACCCACACCCGCACCCGCCACTCATATATTTCCCCCATCCACGTC
                      ____________________________________________________________
consensus             TTCCCCAGGACCCCCACCCACACCCGCACCCGCCACTCATATATTTCCCCCATCCACGTC
 
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JMSF004N01-           TCCCCTTTCATTTCCTTTCCACAGCCTTAAACCATGTATACGTCTTTTCAGTGAAGGAGT
JMFF023J10-                    ATTTCCTTTCCACAGCCTTAAACCATGTATACGTCTTTTCAGTGAAGGAGT
                      ____________________________________________________________
consensus             TCCCCTTTCATTTCCTTTCCACAGCCTTAAACCATGTATACGTCTTTTCAGTGAAGGAGT
 
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JMSF004N01-           AGGCATCTTTTGCGCGTGACCCATTCTCTTCTCCAACCTTTTGATTGACATTACTTTTAT
JMFF023J10-           AGGCATCTTTTGCGCGTGACCCATTCTCTTCTCCAACCTTTTGATTGACATTACTTTTAT
                      ____________________________________________________________
consensus             AGGCATCTTTTGCGCGTGACCCATTCTCTTCTCCAACCTTTTGATTGACATTACTTTTAT
 
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JMSF004N01-           CCAATCCGCACTATATACCCACTCTTTCCCCCATGGAGGTTAAGCTATGGAATGACAAGC
JMFF023J10-           CCAATCCGCACTATATACCCACTCTTTCCCCCATGGAGGTTAAGCTATGGAATGACAAGC
                      ____________________________________________________________
consensus             CCAATCCGCACTATATACCCACTCTTTCCCCCATGGAGGTTAAGCTATGGAATGACAAGC
 
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JMSF004N01-           GTGAAAGAGAGATGTATGACAACTTCGCTGAGCTGTTTGCCATTATAAAAGCCACCGAGA
JMFF023J10-           GTGAAAGAGAGATGTATGACAACTTCGCTGAGCTGTTTGCCATTATAAAAGCCACCGAGA
                      ____________________________________________________________
consensus             GTGAAAGAGAGATGTATGACAACTTCGCTGAGCTGTTTGCCATTATAAAAGCCACCGAGA
 
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JMSF004N01-           AGCTCGAGAAGGCATATGTTCGAGATATCATATCACCAGCAGAGTATGAAACTGAATGCC
JMFF023J10-           AGCTCGAGAAGGCATATGTTCGAGATATCATATCACCAGCAGAGTATGAAACTGAATGCC
rJMFF023J10+                                             CCAGCAGAGTATGAANCTGAATGCC
                      ____________________________________________________________
consensus             AGCTCGAGAAGGCATATGTTCGAGATATCATATCACCAGCAGAGTATGAAACTGAATGCC
 
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JMSF004N01-           AGAAA                                                       
JMFF023J10-           AGAAATTGATTGCACATTTCAAGACATTATCTTCAACACTGAAAGATACTGTGCCAAGCA
rJMFF023J10+          AGAAATTGATTGCACATTTCAAGACATTATCTTCAACACTGAAAGATACTGTGCCAAGCA
                      ____________________________________________________________
consensus             AGAAATTGATTGCACATTTCAAGACATTATCTTCAACACTGAAAGATACTGTGCCAAGCA
 
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JMFF023J10-           TTGAACGATTTCACGACACCTACAAAATGGACTGCCCTGCAGCACTAAACCGGCTCGTTA
rJMFF023J10+          TTGAACGATTTCACGACACCTACAAAATGGACTGCCCTGCAGCACTAAACCGGCTCGTTA
                      ____________________________________________________________
consensus             TTGAACGATTTCACGACACCTACAAAATGGACTGCCCTGCAGCACTAAACCGGCTCGTTA
 
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JMFF023J10-           CTTCAGGGGTGCCCGCCACAGTCGAGCACCGTGCAGCTGCTGCCACGTCAGCTTCAACTT
rJMFF023J10+          CTTCAGGGGTGCCCGCCACAGTCGAGCACCGTGCAGCTGCTGCCACGTCAGCTTCAACTT
                      ____________________________________________________________
consensus             CTTCAGGGGTGCCCGCCACAGTCGAGCACCGTGCAGCTGCTGCCACGTCAGCTTCAACTT
 
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JMFF023J10-           CGGCTGCTGTAGTGGCCGAGTGTGTGCAGAACTTCATTACTGCAATGGACTCGCTGAAGC
rJMSF004N03+                                                                    GC
rJMFF023J10+          CGGCTGCTGTAGTGGCCGAGTGTGTGCAGAACTTCATTACTGCAATGGACTCGCTGAAGC
                      ____________________________________________________________
consensus             CGGCTGCTGTAGTGGCCGAGTGTGTGCAGAACTTCATTACTGCAATGGACTCGCTGAAGC
 
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JMFF023J10-           TAAACATGGTTGCAGTTGA                                         
rJMSF004N01+                       AGTTGACCAGGTCCATCCGCTCCTGTCAGAATTGTCGTCGTCCCGTA
rJMSF004N03+          TAAACATGGTCGCAGTTGACCAGGTCCATCCGCTCCTGTCAGAATNGTCGTCGTCCCTTA
rJMFF023J10+          TAAACATGGTTGCAGTTGACCAGGTCCATCCGCTCCTGTCAGAATTGTCGTCGTCCCTTA
                      ____________________________________________________________
consensus             TAAACATGGTTGCAGTTGACCAGGTCCATCCGCTCCTGTCAGAATTGTCGTCGTCCCTTA
 
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rJMSF004N01+          ACAAGCTTTCAATTTTGCCACCTGATTTCGAGGGAAAAACCAAGATGAGAGAGTGGCTTT
rJMSF004N03+          ACAAGCTTTCAATTTTGCCACCTGATTTCGAGGGAAAAACCAAGATGAGAGAGTGGCTTT
rJMFF023J10+          ACAAGCTTTCAATTTTGCCACCTGATTTCGAGGGAAAAACCAAGATGAGAGAGTGGCTTT
                      ____________________________________________________________
consensus             ACAAGCTTTCAATTTTGCCACCTGATTTCGAGGGAAAAACCAAGATGAGAGAGTGGCTTT
 
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rJMSF004N01+          CGAGGCTGTCCAAAATGGGGGCTGCTGATGAATTGACTGAGCAACAGTCACGCCAGCTTC
rJMSF004N03+          CGAGGCTGTCCAAAATGGGGGCTGCTGATGANTTGACTGAGCAACAGTCACGCCAGCTTC
rJMFF023J10+          CGAGGCTGTCCAAAATGGGGGCTGCTGATGAATTGACTGAGCAACAGTCACGCCAGCTTC
                      ____________________________________________________________
consensus             CGAGGCTGTCCAAAATGGGGGCTGCTGATGAATTGACTGAGCAACAGTCACGCCAGCTTC
 
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rJMSF004N01+          ACTTTGATCTTGAATCGTC-GTACAATTCATTCATGGCAGCATTACCGTCTGCTGGGACT
rJMSF004N03+          ACTTTGATCTTGAATCGTCAGTACAATTCATTCATGGCAGCATCACCGTCTGCTGGGACT
rJMFF023J10+          ACTTTGATCTTGAATCGTC-GTACAATTCATTCATGGCAGCATTACCGTCTGCTGGGACT
                      ____________________________________________________________
consensus             ACTTTGATCTTGAATCGTC-GTACAATTCATTCATGGCAGCATTACCGTCTGCTGGGACT
 
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rJMSF004N01+          TAGGTATCGAATTGGGAG-TTGGANGATGAATTGGGTTAGGCTCGATTTTTTGTAAATAA
rJMSF004N03+          TAGGTATCGAATCGGGAGNTTGGATGATGAATCGGGTTAGGCTCGATTTTNCGTANATAA
rJMFF023J10+          TAGGTATCGAATTGGGAG-TTGGATGATGAATTGGGTTAGGCTCGATTTTTTGTAAATAA
                      ____________________________________________________________
consensus             TAGGTATCGAATTGGGAG-TTGGATGATGAATTGGGTTAGGCTCGATTTTTTGTAAATAA
 
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rJMSF004N01+          GTGGC-TAATTGTTGGTGGCTTCTTTCACACAATTATGGTATTACACATGGTANTGTTGT
rJMSF004N03+          GTGGCATAATTGTTNGTGGCTTCTTTCACACAATTACGGTATTACACATGGCATTGTTGT
rJMFF023J10+          GTGGC-TAATTGTTGGTGGCTTCTTTCACACAATTATGGTATTACACATGGTATTGTTGT
                      ____________________________________________________________
consensus             GTGGC-TAATTGTTGGTGGCTTCTTTCACACAATTATGGTATTACACATGGTATTGTTGT
 
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rJMSF004N01+          TAAGTGAGCNTGTGTAGAACAAAAATTTATTTTGCT                        
rJMSF004N03+          TNAGCGAGCTTNTGTAGAACAAAAATTTATTTTGCT                        
rJMFF023J10+          TAAGTGAGCTTGTGTAGAACAAAAATTTATTTTGCTGTTGGTACTTGTCTGTCTAGGTAA
                      ____________________________________________________________
consensus             TAAGTGAGCTTGTGTAGAACAAAAATTTATTTTGCTGTTGGTACTTGTCTGTCTAGGTAA
 
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rJMFF023J10+          GTCGTCGTACCATTTTGTCAAAATGCATCTTATCCACTTACCCTATAAGTAACTCGAATC
                      ____________________________________________________________
consensus             GTCGTCGTACCATTTTGTCAAAATGCATCTTATCCACTTACCCTATAAGTAACTCGAATC