Contig 009696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022H18Sequence800009696 (2)ref|XP_010278239.1|2e-83PREDICTED: delta(14)-sterol reductase [Nelumbo nucifera]
JMFF041E20Sequence629015295gb|EYU35127.1|2e-99hypothetical protein MIMGU_mgv1a008560mg [Erythranthe guttata]623009696 (2)ref|XP_009764190.1|2e-66PREDICTED: delta(14)-sterol reductase [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022H18+                                                  GGGATATAATTGCGGAGAGA
                      ____________________________________________________________
consensus                                                     GGGATATAATTGCGGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+                                                             AGCATTCAG
rJMFF022H18+          CTGGGGTTCATGCTGGTTTTTGGCGATCTAGTGTGGATCCCTTTCACCTTCAGCATTCAG
                      ____________________________________________________________
consensus             CTGGGGTTCATGCTGGTTTTTGGCGATCTAGTGTGGATCCCTTTCACCTTCAGCATTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          GGTTGGTGGCTTTTAAGCAACAAAGTGGAGCTAACAACAGCTGCTGTAATTGCCAATTGT
rJMFF022H18+          GGTTGGTGGCTTTTAAGCAACAAAGTGGAGCTAACAACAGCTGCTGTAATTGCCAATTGT
                      ____________________________________________________________
consensus             GGTTGGTGGCTTTTAAGCAACAAAGTGGAGCTAACAACAGCTGCTGTAATTGCCAATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          CTTTCTTTCGTGATTGGGTATCGTGTATTTAGAGGAGCAAACAAGCAGAAGCATGTCTTC
rJMFF022H18+          CTTTCTTTCGTGATTGGGTATCGTGTATTTAGAGGAGCAAACAAGCAGAAGCATGTCTTC
                      ____________________________________________________________
consensus             CTTTCTTTCGTGATTGGGTATCGTGTATTTAGAGGAGCAAACAAGCAGAAGCATGTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          AAAAAGAACCCGAAAGCTCCAATATGGGGGATGCCTCCAAAAGTTGTTGGGGGGAAATTG
rJMFF022H18+          AAAAAGAACCCGAAAGCTCCAATATGGGGGATGCCTCCAAAAGTTGTTGGGGGGAAATTG
                      ____________________________________________________________
consensus             AAAAAGAACCCGAAAGCTCCAATATGGGGGATGCCTCCAAAAGTTGTTGGGGGGAAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          CTGGCTTCTGGCTATTGGGGAATTGCACGGCACTGTAATTACCTAGGGGATTTGTTACTT
rJMFF022H18+          CTGGCTTCTGGCTATTGGGGAATTGCACGGCACTGTAATTACCTAGGGGATTTGTTACTT
                      ____________________________________________________________
consensus             CTGGCTTCTGGCTATTGGGGAATTGCACGGCACTGTAATTACCTAGGGGATTTGTTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          GCCCTCTCCTTCAGTTTACCGTGTGGAATAAGCTCTGCAGTTCCATACTTCTATCCCATA
rJMFF022H18+          GCCCTCTCCTTCAGTTTACCGTGTGGAATAAGCTCTGCAGTTCCATACTTCTATCCCATA
                      ____________________________________________________________
consensus             GCCCTCTCCTTCAGTTTACCGTGTGGAATAAGCTCTGCAGTTCCATACTTCTATCCCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          TATCTTCTTATTTTGCTAATATGGAGGGAGAGAAGGGATGATGCCCGGTGTGCTGAGAAG
rJMFF022H18+          TATCTTCTTATTTTGCTAATATGGAGGGAGAGAAGGGATGATGCCCGGTGTGCTGAGAAG
                      ____________________________________________________________
consensus             TATCTTCTTATTTTGCTAATATGGAGGGAGAGAAGGGATGATGCCCGGTGTGCTGAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          TATAAAGAAGTTTGGGAAGAATACTGTAAGCTTGTCCCGTGGAGGATATTGCCATATGTT
rJMFF022H18+          TATAAAGAAGTTTGGGAAGAATACTGTAAGCTTGTCCCGTGGAGGATATTGCCATATGTT
                      ____________________________________________________________
consensus             TATAAAGAAGTTTGGGAAGAATACTGTAAGCTTGTCCCGTGGAGGATATTGCCATATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          TATTAACGGGTGAGGGTTTGATTCACCGTTGTGAATTTTGGGATATCATCAAACTAATGC
rJMFF022H18+          TATTAACGGGTGAGGGTTTGATTCACCGTTGTGAATTTTGGGATATCATCAAACTAATGC
                      ____________________________________________________________
consensus             TATTAACGGGTGAGGGTTTGATTCACCGTTGTGAATTTTGGGATATCATCAAACTAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          AAATGCATGTGCAGATAGAGATGTAGATCCGATTAATGTCTGTTGTGTGGCTGCAGGAAA
rJMFF022H18+          AAATGCATGTGCAGATAGAGATGTAGATCCGATTAATGTCTGTTGTGTGGCTGCAGGAAA
                      ____________________________________________________________
consensus             AAATGCATGTGCAGATAGAGATGTAGATCCGATTAATGTCTGTTGTGTGGCTGCAGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          TATGAACTTTAGTTGTCCAGATTCTACTTTCTGATTGAGGTGTTTTTAAGCTTAAATTCT
rJMFF022H18+          TATGAACTTTAGTTGTCCAGATTCTACTTTCTGATTGAGGTGTTTTTAAGCTTAAATTCT
                      ____________________________________________________________
consensus             TATGAACTTTAGTTGTCCAGATTCTACTTTCTGATTGAGGTGTTTTTAAGCTTAAATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF041E20+          GTGCATTTCATACG                                              
rJMFF022H18+          GTGCATTTCATACGAATCCGGCTTGTGAATTGTTATCTTGCAATTGTTATACTATGGACC
                      ____________________________________________________________
consensus             GTGCATTTCATACGAATCCGGCTTGTGAATTGTTATCTTGCAATTGTTATACTATGGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022H18+          AGGTCCACCCTGCATTGTGCATCCTGGTTCAAAAATTATGTGTTTGCAATTAACATATAT
                      ____________________________________________________________
consensus             AGGTCCACCCTGCATTGTGCATCCTGGTTCAAAAATTATGTGTTTGCAATTAACATATAT