| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004M17 | Sequence | 689 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 2e-13 | nuclear RNA binding protein [Nicotiana tabacum] | |||||
| JMFF011E23 | Sequence | 551 | 010722 (9) | 794 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 6e-33 | nuclear RNA binding protein [Nicotiana tabacum] | |||
| JMFF013J11 | Sequence | 516 | 010722 (9) | 794 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 5e-33 | nuclear RNA binding protein [Nicotiana tabacum] | |||
| JMFF021G07 | Sequence | 489 | 010722 (9) | 699 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 1e-15 | nuclear RNA binding protein [Nicotiana tabacum] | |||
| JMFF026O15 | Sequence | 618 | 009693 (11) | ref|XP_006362472.1| | 4e-36 | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum | |||||
| JMFF028B10 | Sequence | 515 | 010722 (9) | 756 | 009693 (11) | ref|XP_009613636.1| | 3e-29 | PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform X2 [Nicotiana | |||
| JMFN007B14 | Sequence | 551 | 009693 (11) | ref|XP_007218155.1| | 9e-05 | hypothetical protein PRUPE_ppa007410mg [Prunus persica] gb|EMJ19354.1| hypotheti | |||||
| JMSF009N13 | Sequence | 330 | 010722 (9) | 765 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 1e-33 | nuclear RNA binding protein [Nicotiana tabacum] | |||
| JMSF012I23 | Sequence | 358 | 010722 (9) | 774 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 7e-27 | nuclear RNA binding protein [Nicotiana tabacum] | |||
| JMSF025G12 | Sequence | 575 | 010722 (9) | 799 | 009693 (11) | ref|XP_006362472.1| | 3e-38 | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum | |||
| JMSF040B11 | Sequence | 643 | 010722 (9) | 850 | 009693 (11) | gb|AAF14242.1|AF110226_1 | 3e-30 | nuclear RNA binding protein [Nicotiana tabacum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF009N13+ TGTTAATG
rJMFF026O15+ CTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
rJMSF025G12+ CAACTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
rJMFF013J11+ TGTTAATG
rJMFF011E23+ GTTAATG
____________________________________________________________
consensus CAACTGATGAGATAGCTCCGGAGACTGAAGAGTCTGTTAATG
. : . : . : . : . : . :
rJMSF009N13+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF026O15+ AAGTTGAGAAGTCTGTTGATGTTGACAANCAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMSF025G12+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF013J11+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAANCCGGGCATGAAGGTGCTGGAGATGCCA
rJMFF028B10+ GGGCATGAAGGTGCTGGAGATGCCA
rJMFF011E23+ AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
rJMSF012I23+ CA
rJMSF040B11+ CCGGGCATGAAGGTGCTGGAGATGCCA
____________________________________________________________
consensus AAGTTGAGAAGTCTGTTGATGTTGACAAACAAACCGGGCATGAAGGTGCTGGAGATGCCA
. : . : . : . : . : . :
rJMSF009N13+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF026O15+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMSF025G12+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF013J11+ GTAAGGATTTTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF028B10+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF011E23+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMSF012I23+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
rJMFF004M17+ CGAGGATAAGGAGATGACCC
rJMSF040B11+ GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
____________________________________________________________
consensus GTAAGGATTCTCCAAATAATGAGCCAGAAGAGAAGGAGCCCGAGGATAAGGAGATGACCC
. : . : . : . : . : . :
rJMSF009N13+ TTGAAGAGTATAAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF026O15+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF025G12+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF013J11+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF028B10+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGGGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF011E23+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGGGAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF012I23+ NTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
rJMFF004M17+ TTGAAGAGTATGAGAAGGTGCTNGAGGAGAAGGNAAAGGCGTTGATGGCACTAAAGCCCG
rJMSF040B11+ TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
____________________________________________________________
consensus TTGAAGAGTATGAGAAGGTGCTCGAGGAGAAGAGAAAGGCGTTGATGGCACTAAAGCCCG
. : . : . : . : . : . :
rJMSF009N13+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF026O15+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMSF025G12+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF013J11+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF028B10+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF011E23+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMSF012I23+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF004M17+ AGGAGAGAAAGGTTCGCTTNGACAAAGAATTTGCGTNTATGCAGGTGATATCAAGCAAGA
rJMSF040B11+ AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
rJMFF021G07+ GGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
____________________________________________________________
consensus AGGAGAGAAAGGTTCGCTTGGACAAAGAATTTGCGTCTATGCAGGTGATATCAAGCAAGA
. : . : . : . : . : . :
rJMSF009N13+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF026O15+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF025G12+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF013J11+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF028B10+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF011E23+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF012I23+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
rJMFF004M17+ AAAATGATGAATCTGTCTTTATTAAATTGGGATNTGAGAAGGATAAAAAGAAAGAAGCAG
rJMSF040B11+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
JMFN007B14- AAAAAGAAAGAAGCAG
rJMFF021G07+ AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
____________________________________________________________
consensus AAAATGATGAATCTGTCTTTATTAAATTGGGATCTGAGAAGGATAAAAAGAAAGAAGCAG
. : . : . : . : . : . :
rJMSF009N13+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF026O15+ GAGAAAAGGTCAAAAAGACCCAANCCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF025G12+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF013J11+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF028B10+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF011E23+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF012I23+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF004M17+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMSF040B11+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
JMFN007B14- GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
rJMFF021G07+ GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
____________________________________________________________
consensus GAGAAAAGGTCAAAAAGACCCAAACCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAAA
. : . : . : . : . : . :
rJMSF009N13+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF026O15+ GCTTCANCCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGNTATGGTGGAA
rJMSF025G12+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF013J11+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF028B10+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF011E23+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMSF012I23+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF004M17+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMSF040B11+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
JMFN007B14- GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
rJMFF021G07+ GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
____________________________________________________________
consensus GCTTCAACCGTGGTGGCCGTGGCAGGGGCCGCGGTCGTGGCCGTGGGGGCTATGGTGGAA
. : . : . : . : . : . :
rJMSF009N13+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF026O15+ GCAACATGAACACGANNTATGCTGAGGCTTCAGCCCCATCGATNGAAGATGTCGGGCAGT
rJMSF025G12+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF013J11+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF028B10+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF011E23+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMSF012I23+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF004M17+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMSF040B11+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
JMFN007B14- GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
rJMFF021G07+ GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
____________________________________________________________
consensus GCAACATGAACACGAACTATGCTGAGGCTTCAGCCCCATCGATTGAAGATGTCGGGCAGT
. : . : . : . : . : . :
rJMSF009N13+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF026O15+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTNCCAGTCGAGCTCTCTTCTCTCCA
rJMSF025G12+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF013J11+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF028B10+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF011E23+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMSF012I23+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF004M17+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMSF040B11+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
JMFN007B14- TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
rJMFF021G07+ TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
____________________________________________________________
consensus TCCCTAGCTTGGGTGCAAAGTAAGCGACCACGGCCTGCCAGTCGAGCTCTCTTCTCTCCA
. : . : . : . : . : . :
rJMSF009N13+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF026O15+ ATTTTGCCACTTCATTTCGGNTNGAAAATGGCAGGATGT
rJMSF025G12+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF013J11+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF028B10+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF011E23+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMSF012I23+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF004M17+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMSF040B11+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
JMFN007B14- ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
rJMFF021G07+ ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
____________________________________________________________
consensus ATTTTGCCACTTCATTTCGGCTCGAAAATGGCAGGATGTCTGAAGGACTTGTCTGTTCAA
. : . : . : . : . : . :
rJMSF009N13+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF025G12+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF013J11+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF028B10+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF011E23+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF012I23+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF004M17+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMSF040B11+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
JMFN007B14- GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
rJMFF021G07+ GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
____________________________________________________________
consensus GAATTATAAACCGTTTTTATAGTTTTAAGAGTGTATATTTAGATGCCTTCTGGGAGTTCA
. : . : . : . : . : . :
rJMSF009N13+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCTTCCCCCTCCCCCCTTTTA
rJMSF025G12+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF013J11+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF028B10+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF011E23+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMSF012I23+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF004M17+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMSF040B11+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
JMFN007B14- CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
rJMFF021G07+ CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
____________________________________________________________
consensus CATCCTCTCCCCCTTCTTGACTCTGAGATTGCTTTGATACCCTCCCCCTCCCCCCTTTTA
. : . : . : . : . : . :
rJMSF009N13+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGAT
rJMSF025G12+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGAT
rJMFF013J11+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF028B10+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATT
rJMFF011E23+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMSF012I23+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF004M17+ TATTTAGGCATTAATTTCATGATTTTACAACTTCCAGATTTTCTTAAGATTTTTAGTTTA
rJMSF040B11+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
JMFN007B14- TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
rJMFF021G07+ TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
____________________________________________________________
consensus TATTTAGGCATTAATTTC-TGATTTTACAACTT-CAGATTTTCTTAAGATTTTTAGTTTA
. : . : . : . : . : . :
rJMFF013J11+ TGGGATCA
rJMFF011E23+ TGGGATCAG
rJMSF012I23+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTT
rJMFF004M17+ NGGGATCAG
rJMSF040B11+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
JMFN007B14- TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTT
rJMFF021G07+ TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
____________________________________________________________
consensus TGGGATCAGTTTTGATTTGGCAAAAGTTTTGTTCTGTTTTAAATGTAATGCTTTTGTTTC
. : . : . : . : . : . :
rJMSF040B11+ AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCT
rJMFF021G07+ AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCTTACTTGAGAGCATTCACAA
____________________________________________________________
consensus AAGATTATTGTTGTTGAAGTCTTCCAGTAGCTTTCTCATCTTACTTGAGAGCATTCACAA