Contig 009685:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019I18Sequence524009685 (2)ref|XP_009774543.1|7e-29PREDICTED: DAG protein, chloroplastic [Nicotiana sylvestris]697009685 (2)gb|KDO74391.1|5e-18hypothetical protein CISIN_1g027488mg [Citrus sinensis]

Alignment

This contig is upended


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JMFF019I18-                             CTCTGAAAGTATACAAATCCTCTCCGATCTCCACACAAGAAA
                      ____________________________________________________________
consensus                               CTCTGAAAGTATACAAATCCTCTCCGATCTCCACACAAGAAA
 
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JMFF019I18-           TGGCGGCTCTGAATCTCTCTCCTCTTTTCAAAGCCCTAAACCCCCAAATATCCCATTCCA
                      ____________________________________________________________
consensus             TGGCGGCTCTGAATCTCTCTCCTCTTTTCAAAGCCCTAAACCCCCAAATATCCCATTCCA
 
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JMFF019I18-           ATAACCCTTCTAAAGCCCCAACTTTGCTGCTTTCTCTGTCGTACCCTCTTCCCTCGACCT
                      ____________________________________________________________
consensus             ATAACCCTTCTAAAGCCCCAACTTTGCTGCTTTCTCTGTCGTACCCTCTTCCCTCGACCT
 
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JMFF019I18-           CGCCGGCGCCGGCGCCGCCACTCCTCCGCTGCACCCTCACACACCAAAGCCCATCAAGAC
                      ____________________________________________________________
consensus             CGCCGGCGCCGGCGCCGCCACTCCTCCGCTGCACCCTCACACACCAAAGCCCATCAAGAC
 
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JMFF019I18-           TTCACCCGTTGAGAGCCGTCGGGGACGAAGAATACTCAGCTAGGAGAAGCAGTAATGAAG
                      ____________________________________________________________
consensus             TTCACCCGTTGAGAGCCGTCGGGGACGAAGAATACTCAGCTAGGAGAAGCAGTAATGAAG
 
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JMFF019I18-           TAAGAGAAGCTATTTTGCTGCCTGGCTGTGACTACAACCACTGGCTTATAGTCATGGACT
rJMFF019I18+                                 GGCTGTGACTACAACCACTGGCTNATAGTCATGGACT
                      ____________________________________________________________
consensus             TAAGAGAAGCTATTTTGCTGCCTGGCTGTGACTACAACCACTGGCTTATAGTCATGGACT
 
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JMFF019I18-           TCCCCAAA-GACCCTGCCCCTACCAGAGACCAGATGATCGACACTTATCTTAATACTCTC
rJMFF019I18+          TCCCCAAAGGACCCTGCCCCTACCAGAGACCAGATGATCGACACTTATCTTAATACTCTC
                      ____________________________________________________________
consensus             TCCCCAAAGGACCCTGCCCCTACCAGAGACCAGATGATCGACACTTATCTTAATACTCTC
 
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JMFF019I18-           GCCACTGTTCTTGGCAGGGGATAAGTACATCAATGGTGAGATAATTCCAAGCCAGTACCC
rJMFF019I18+          GCCACTGTTCTTGGCAGGGGATAAGTACATCAATGGTGAGATAATTCCAAGCCAGTACCC
                      ____________________________________________________________
consensus             GCCACTGTTCTTGGCAGGGGATAAGTACATCAATGGTGAGATAATTCCAAGCCAGTACCC
 
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JMFF019I18-           TACATACCACCAAAAGAAGTCTAATTCCCCAAAAAACAAGAGTAGATCATACGTTAGAAG
rJMFF019I18+          TACATACCACCAAAAGAAGTCTAATTCCCCAAAAAACAAGAGTAGATCATACGTTAGAAG
                      ____________________________________________________________
consensus             TACATACCACCAAAAGAAGTCTAATTCCCCAAAAAACAAGAGTAGATCATACGTTAGAAG
 
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JMFF019I18-           AAG                                                         
rJMFF019I18+          AAGAGATGGTTCCCTCGAACGGCAGAGACAGGAAACTTCTTCCTAGAAGCATACTGGTAG
                      ____________________________________________________________
consensus             AAGAGATGGTTCCCTCGAACGGCAGAGACAGGAAACTTCTTCCTAGAAGCATACTGGTAG
 
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rJMFF019I18+          ATATTCAGTTAAAGAGTCGAACTGCCTTACTTGTTAGAAATGCCAATGTATGAGCACAGC
                      ____________________________________________________________
consensus             ATATTCAGTTAAAGAGTCGAACTGCCTTACTTGTTAGAAATGCCAATGTATGAGCACAGC
 
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rJMFF019I18+          CTTAAACTGGGTGGGGTATTTTCAAAGATGCACAAGTGCTTCTCCATTAATGTAGTATTA
                      ____________________________________________________________
consensus             CTTAAACTGGGTGGGGTATTTTCAAAGATGCACAAGTGCTTCTCCATTAATGTAGTATTA
 
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rJMFF019I18+          GTTCAGTGAAGCTGTTGTTTCTCATCTTTGATGAACACCAACTGGCTAATTTCATTGTGA
                      ____________________________________________________________
consensus             GTTCAGTGAAGCTGTTGTTTCTCATCTTTGATGAACACCAACTGGCTAATTTCATTGTGA
 
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rJMFF019I18+          GTCGGCCGCCTAGACCACCACGGATTATGGTGATACGCTAGGTGGCCAGTAGGCACCTAG
                      ____________________________________________________________
consensus             GTCGGCCGCCTAGACCACCACGGATTATGGTGATACGCTAGGTGGCCAGTAGGCACCTAG
 
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rJMFF019I18+          TGCTAGGCGTCGGGAATTTTTGCAACATTGCTTGGGAGCCTTGCAACCGTGCTTGTATTT
                      ____________________________________________________________
consensus             TGCTAGGCGTCGGGAATTTTTGCAACATTGCTTGGGAGCCTTGCAACCGTGCTTGTATTT
 
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rJMFF019I18+          GCTTCGTGTGAGTTTTCTCGAAAATATTGTAGCCATGCGAAAGTCACTTGTTTGCCTGAA
                      ____________________________________________________________
consensus             GCTTCGTGTGAGTTTTCTCGAAAATATTGTAGCCATGCGAAAGTCACTTGTTTGCCTGAA
 
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rJMFF019I18+          CGAAAACCGTTATGTAGTTTAATTGACATCAAACACTGTTCCCAGCACGCAGCAAATAAG
                      ____________________________________________________________
consensus             CGAAAACCGTTATGTAGTTTAATTGACATCAAACACTGTTCCCAGCACGCAGCAAATAAG