Contig 009683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019B19Sequence547001659 (2)ref|XP_011075988.1|2e-07PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr742009683 (2)ref|XP_009774630.1|3e-74PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMSF028B17Sequence653001659 (2)ref|XP_004234968.1|3e-38PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr751009683 (2)ref|XP_009774630.1|1e-76PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr

Alignment

This contig is upended


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rJMSF028B17+          AGACNGTTGAAAGTAGTGACTTATTTCCTATGGTTTGATACCGGAGTTNGTTGGACGATT
rJMFF019B19+                                              GATACCGGAGTTTGTTGGACGATT
                      ____________________________________________________________
consensus             AGACNGTTGAAAGTAGTGACTTATTTCCTATGGTTTGATACCGGAGTTTGTTGGACGATT
 
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rJMSF028B17+          TCCCATCCTTGTTAGTTTAACTGCTCTTACTGAGAATCAACTTGNGCAGGTTTTAACAGA
rJMFF019B19+          TCCCATCCTTGTTAGTTTAACTGCTCTTACTGAGAATCAACTTGTGCAGGTTTTAACAGA
                      ____________________________________________________________
consensus             TCCCATCCTTGTTAGTTTAACTGCTCTTACTGAGAATCAACTTGTGCAGGTTTTAACAGA
 
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rJMSF028B17+          GCCAAAAAATGCACTTGGGAAGCAATACAAAAAAATGTTCCAAATGAATAATGTAAAACT
rJMFF019B19+          GCCAAAAAATGCACTTGGGAAGCAATACAAAAAAATGTTCCAAATGAATAATGTAAAACT
                      ____________________________________________________________
consensus             GCCAAAAAATGCACTTGGGAAGCAATACAAAAAAATGTTCCAAATGAATAATGTAAAACT
 
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rJMSF028B17+          GCATTTCACCGAAGACGCTTTGAGATCGATAGCTAGGAAAGCAATCACCAAGAATACAGG
rJMFF019B19+          GCATTTCACCGAAGACGCTTTGAGATCGATAGCTAGGAAAGCAATCACCAAGAATACAGG
                      ____________________________________________________________
consensus             GCATTTCACCGAAGACGCTTTGAGATCGATAGCTAGGAAAGCAATCACCAAGAATACAGG
 
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rJMSF028B17+          AGCCCGTGGATTGAGATCCATATTGGAAAGTATTTTGATGGATGCTATGTATGAGATCCC
rJMFF019B19+          AGCCCGTGGATTGAGATCCATATTGGAAAGTATTTTGATGGATGCTATGTATGAGATCCC
                      ____________________________________________________________
consensus             AGCCCGTGGATTGAGATCCATATTGGAAAGTATTTTGATGGATGCTATGTATGAGATCCC
 
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rJMSF028B17+          TGATGTCAGGTCGGGTGATAATGTAATAGATGCTGTTATAGTTGACGATGAGGCTGTAGG
rJMFF019B19+          TGATGTCAGGTCGGGTGATAATGTAATAGATGCTGTTATAGTTGACGATGAGGCTGTAGG
                      ____________________________________________________________
consensus             TGATGTCAGGTCGGGTGATAATGTAATAGATGCTGTTATAGTTGACGATGAGGCTGTAGG
 
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rJMSF028B17+          ACATGAGGGGCGTGGATGTGGGGCCAAAATCCTCTATGGTAAGGGGGCGTTGGACTGTTA
rJMFF019B19+          ACATGAGGGGCGTGGATGTGGGGCCAAAATCCTCTATGGTAAGGGGGCGTTGGACTGTTA
                      ____________________________________________________________
consensus             ACATGAGGGGCGTGGATGTGGGGCCAAAATCCTCTATGGTAAGGGGGCGTTGGACTGTTA
 
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rJMSF028B17+          TCTTTCAGGAAATGAACAAAAGGAACCCAAGAAAATTGTGGAGGGGTCCGAGGCAGATAT
rJMFF019B19+          TCTTTCAGGAAATGAACAAAAGGAACCCAAGAAAATTGTGGAGGGGTCCGAGGCAGATAT
                      ____________________________________________________________
consensus             TCTTTCAGGAAATGAACAAAAGGAACCCAAGAAAATTGTGGAGGGGTCCGAGGCAGATAT
 
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rJMSF028B17+          CGAGGTGGAACGAGATCTTCCTTCTATTGTTGCTTTGTAGACACCACCTGCCACGCGCTT
rJMFF019B19+          CGAGGTGGAACGAGATCTTCCTTCTATTGTTGCTTTGTAGACACCACCTGCCACGCGCCT
                      ____________________________________________________________
consensus             CGAGGTGGAACGAGATCTTCCTTCTATTGTTGCTTTGTAGACACCACCTGCCACGCGCTT
 
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rJMSF028B17+          TGAGATCTATTGCCATTCTCATCTGTGTATAGTATGTAATATCTGAATTGCGAAATATAT
rJMFF019B19+          TGAGATCTATTGCCATTCTCATCTGTGTATAGTATGTAATATCTGAATTGCGAAATATAT
                      ____________________________________________________________
consensus             TGAGATCTATTGCCATTCTCATCTGTGTATAGTATGTAATATCTGAATTGCGAAATATAT
 
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rJMSF028B17+          ATTTACTCAGATTTGCAATTAGGCTGTGCNGTAATGATATTTTTCTCTCAGGCCTTTACC
rJMFF019B19+          ATTTACT--GATTTGCAATTAGGCTGTGCTGTAATGATATTTTTCTCTCAGGCCTTTACC
                      ____________________________________________________________
consensus             ATTTACTCAGATTTGCAATTAGGCTGTGCTGTAATGATATTTTTCTCTCAGGCCTTTACC
 
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rJMSF028B17+          ACATTGTACTAATTGATAGTGTTATCATCATCAGCTCATTCATTCATCTAGATAAGTGAA
rJMFF019B19+          ACATTGTACTAATTGATAGTGTTATCATCATCAGCTCATTCATTCATCTAGATAAGTGAA
                      ____________________________________________________________
consensus             ACATTGTACTAATTGATAGTGTTATCATCATCAGCTCATTCATTCATCTAGATAAGTGAA
 
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rJMSF028B17+          AC                                                          
rJMFF019B19+          ACAATGTGGTGGAATGAACTATGACTACCTCTGTGGACTTTTCCTTGAAATAATATAGGA
                      ____________________________________________________________
consensus             ACAATGTGGTGGAATGAACTATGACTACCTCTGTGGACTTTTCCTTGAAATAATATAGGA