Contig 009680:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018J06Sequence764009680 (2)ref|XP_009794726.1|6e-122PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFS095C08Sequence613009680 (2)ref|XP_009794726.1|2e-84PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve

Alignment

This contig is upended


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JMFS095C08-                    TTCAACAGTTACCGTCAGGAATCTAACGTCGGCGCCGATTCTTTCAACTCC
                      ____________________________________________________________
consensus                      TTCAACAGTTACCGTCAGGAATCTAACGTCGGCGCCGATTCTTTCAACTCC
 
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JMFS095C08-           TACGGCAAAAAATCGAACGCCGCCGATGTCGGTTTCGTGAACTACGGCAAAACGTTCAAC
                      ____________________________________________________________
consensus             TACGGCAAAAAATCGAACGCCGCCGATGTCGGTTTCGTGAACTACGGCAAAACGTTCAAC
 
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JMFS095C08-           GGAGGGACGGATAAATTCTCCGGCTATAGTGACAGCGACAGAGTTTCCTTCAATGGCTAC
                      ____________________________________________________________
consensus             GGAGGGACGGATAAATTCTCCGGCTATAGTGACAGCGACAGAGTTTCCTTCAATGGCTAC
 
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JMFS095C08-           GGCGTAAACAACACCTTCAAAGACTACGCCAAAACCGGCGTCACATTCGCCGGCTACCTG
                      ____________________________________________________________
consensus             GGCGTAAACAACACCTTCAAAGACTACGCCAAAACCGGCGTCACATTCGCCGGCTACCTG
 
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JMFS095C08-           AACGCCACCGACGTAACCGCGGCGGTGGGGGCGGCCAAGGGCAAAATGGTAAATAACAAG
                      ____________________________________________________________
consensus             AACGCCACCGACGTAACCGCGGCGGTGGGGGCGGCCAAGGGCAAAATGGTAAATAACAAG
 
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JMFS095C08-           AGGTGGGTGGAGCCCGGGAAGTTTTTCCGAGAGAAGATGTTGAAGAGTGGGACTATAATG
rJMFF018J06+                          GGAAGTTTTTCCGAGAGAAGATGTTGAAGAGTGGGACTATAATG
                      ____________________________________________________________
consensus             AGGTGGGTGGAGCCCGGGAAGTTTTTCCGAGAGAAGATGTTGAAGAGTGGGACTATAATG
 
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JMFS095C08-           CCTATGCCAGATATTCGGGATAAGATGCCGAAAAGGTCGTTTTTGCCCCGGAATATCGCG
rJMFF018J06+          CNTATGCCAGATATTCGGGATAAGATGCCGAAAAGGTCGTTTTTGCCCCGGAATATCGCG
                      ____________________________________________________________
consensus             CCTATGCCAGATATTCGGGATAAGATGCCGAAAAGGTCGTTTTTGCCCCGGAATATCGCG
 
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JMFS095C08-           GCGGAGCTGCCATTCTCCGCCGCGGAGATCGGCGAACTGGAGAAAATTTTCCACGCCGTC
rJMFF018J06+          GCGGAGCTGCCATTCTCCGCCGCGGAGATCGGCGAACTGGAGAAAATTTTCCACGCCGTC
                      ____________________________________________________________
consensus             GCGGAGCTGCCATTCTCCGCCGCGGAGATCGGCGAACTGGAGAAAATTTTCCACGCCGTC
 
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JMFS095C08-           GAGGGCTCCGCCATGGCTAAGATGATCGCCGGCACGTTGGCCGAGTGCGAGCGCGCACCG
rJMFF018J06+          GAGGGCTCCGCCATGGCTAAGATGATCGCCGGCACGTTGGCCGAGTGCGAGCGCGCACCG
                      ____________________________________________________________
consensus             GAGGGCTCCGCCATGGCTAAGATGATCGCCGGCACGTTGGCCGAGTGCGAGCGCGCACCG
 
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JMFS095C08-           AGCAGAGACGAGACCAAGCGGTGCGTCACCTNCGTGGAGGACATGATCGACTTCGCCACC
rJMFF018J06+          AGCAGAGACGAGACCAAGCGGTGCGTCACCTCCGTGGAGGACATGATCGACTTCGCCACC
                      ____________________________________________________________
consensus             AGCAGAGACGAGACCAAGCGGTGCGTCACCTCCGTGGAGGACATGATCGACTTCGCCACC
 
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rJMFF018J06+          GCCGTGCTGGGCCGGAACGTGGTGGTTCGGACGACGGAAACCACCGTGGGGGCGAAACAA
                      ____________________________________________________________
consensus             GCCGTGCTGGGCCGGAACGTGGTGGTTCGGACGACGGAAACCACCGTGGGGGCGAAACAA
 
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rJMFF018J06+          ACCATCATGATCGGATCGGTCAAAGGAATCAACGGTGGAAAACTCACCAAATCAGTTTCG
                      ____________________________________________________________
consensus             ACCATCATGATCGGATCGGTCAAAGGAATCAACGGTGGAAAACTCACCAAATCAGTTTCG
 
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rJMFF018J06+          TGTCACCAAAGCCTTTTCCCATACTTAGTCTATTACTGCCACTCGGTCCCTAAAGTTCGG
                      ____________________________________________________________
consensus             TGTCACCAAAGCCTTTTCCCATACTTAGTCTATTACTGCCACTCGGTCCCTAAAGTTCGG
 
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rJMFF018J06+          GTCTACGAAGCGGATATTTTGGACCCGAAAACCAAGGACAAGATCAACCACGGTGTTGCC
                      ____________________________________________________________
consensus             GTCTACGAAGCGGATATTTTGGACCCGAAAACCAAGGACAAGATCAACCACGGTGTTGCC
 
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rJMFF018J06+          ATTTGTCATATCGACACGTCAGCTTGGGGTGCCACGCATGGTGCCTTCTTGGCACTTGGG
                      ____________________________________________________________
consensus             ATTTGTCATATCGACACGTCAGCTTGGGGTGCCACGCATGGTGCCTTCTTGGCACTTGGG
 
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rJMFF018J06+          TCGGGTCCGGGTAAGATTGAGGTGTGCCATTGGATCTTTGAGAATGACATGACATGGACG
                      ____________________________________________________________
consensus             TCGGGTCCGGGTAAGATTGAGGTGTGCCATTGGATCTTTGAGAATGACATGACATGGACG
 
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rJMFF018J06+          GTGGCAGATTAATCAAATATGCTTAATTATGTCAATAACTCATTTAAAGTACCATTTTAG
                      ____________________________________________________________
consensus             GTGGCAGATTAATCAAATATGCTTAATTATGTCAATAACTCATTTAAAGTACCATTTTAG
 
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rJMFF018J06+          GTAACATTTTATCATTTTATGTTGGAACATGAATGGTGCAGCCTTTGATTAATGACTTTT
                      ____________________________________________________________
consensus             GTAACATTTTATCATTTTATGTTGGAACATGAATGGTGCAGCCTTTGATTAATGACTTTT