Contig 009675:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF050I14+                                                 CAAGACATCATGGGAATGGTN
                      ____________________________________________________________
consensus                                                    CAAGACATCATGGGAATGGTN
 
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rJMSF050I14+          AAGATTGGTGATTGATGGAGATAAACACGAGGTGCTTGCTGATAGAGCTGAAAGCCTTCT
                      ____________________________________________________________
consensus             AAGATTGGTGATTGATGGAGATAAACACGAGGTGCTTGCTGATAGAGCTGAAAGCCTTCT
 
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rJMSF050I14+          GCTTTGCTTGAAACAACGGTTTCCCGGTCTTCCCCAGACCACTTTAGACATGAGCAAGAT
rJMFF017B14+                                                CCACTTTAGACATGAGCAAGAT
                      ____________________________________________________________
consensus             GCTTTGCTTGAAACAACGGTTTCCCGGTCTTCCCCAGACCACTTTAGACATGAGCAAGAT
 
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rJMSF050I14+          CCAATATAACAAGGATGTTGGCAAATCCATACTCGAAAGCTACTCCCGAGTTCTAGAGAG
rJMFF017B14+          CCAATATANCAAGGATGTTGGCAAATCCATACTCGAAAGCTACTCCCGAGTTCTAGAGAG
                      ____________________________________________________________
consensus             CCAATATAACAAGGATGTTGGCAAATCCATACTCGAAAGCTACTCCCGAGTTCTAGAGAG
 
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rJMSF050I14+          TCTGGCTTTCAACATCGTGGCACGTATAGATGACCTTGTTTACGTGGATGAC-TTGACTA
rJMFF017B14+          TCTGGCTTTCAACATCGTGGCACGTATAGATGACCTTGTTTACGTGGATGACGTTGACTA
                      ____________________________________________________________
consensus             TCTGGCTTTCAACATCGTGGCACGTATAGATGACCTTGTTTACGTGGATGACGTTGACTA
 
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rJMSF050I14+          AACATTCTGATCAATTCGTGCCCATATCGAAAGTAGGCATCATAGCTCACAAGAGTGCAG
rJMFF017B14+          AACATTCTGATCAATTCGTGCCCATATCGAAAGTAGGCATCATAGCTCACAAGAGTGCAG
                      ____________________________________________________________
consensus             AACATTCTGATCAATTCGTGCCCATATCGAAAGTAGGCATCATAGCTCACAAGAGTGCAG
 
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rJMSF050I14+          GGACTCCCCTCACTCCATACAAAACCGCTTTCTCTACACCTAGCTTCTCACCCTCCCAGC
rJMFF017B14+          GGACTCCCCTCACTCCATACAAAACCGCTTTCTCTACACCTAGCTTCTCACCCTCCCAGC
                      ____________________________________________________________
consensus             GGACTCCCCTCACTCCATACAAAACCGCTTTCTCTACACCTAGCTTCTCACCCTCCCAGC
 
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rJMSF050I14+          GTTTCAGTCCTGCAAAGGGAGAAAGAGAAAGAGAAAGAGAAAGATCACATTTCCTCGACA
rJMFF017B14+          GTTTCAGTCCTGCAAAGGGAGAAAGAGAAAGAGAAAGAGAAAGATCACATTTCCTCGACA
                      ____________________________________________________________
consensus             GTTTCAGTCCTGCAAAGGGAGAAAGAGAAAGAGAAAGAGAAAGATCACATTTCCTCGACA
 
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rJMSF050I14+          GCACCAAGCTCCCTCACCGAGGATTTGGGGTGAAAAAGATCTTGACAGATTATCTGAGCA
rJMFF017B14+          GCACCAAGCTCCCTCACCGAGGATTTCGGGTGAAAAAGATCTTGACAGATTATCTGAGCA
                      ____________________________________________________________
consensus             GCACCAAGCTCCCTCACCGAGGATTTGGGGTGAAAAAGATCTTGACAGATTATCTGAGCA
 
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rJMSF050I14+          TCGATTCCAAAGGTAAGGACTTTAGTAACGATATGAGAAGATCTGATTCTTTGTTCAGCA
rJMFF017B14+          TCGATTCCAAAGGTAAGGACTTTAGTAACGATATGAGAAGATCTGATTCTTTGTCCAGCA
                      ____________________________________________________________
consensus             TCGATTCCAAAGGTAAGGACTTTAGTAACGATATGAGAAGATCTGATTCTTTGTTCAGCA
 
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rJMSF050I14+          CTTCCCACGAAATATTAGCCCCAGAATCAGTTCGATCTTCTGAGTGTTCGAGAGAAGTTA
rJMFF017B14+          CTTCCCACGAAATATCAGCCCCAGAATCAGTTCGATCTTCTGAGTGTTCGAGAGAAGTTA
                      ____________________________________________________________
consensus             CTTCCCACGAAATATTAGCCCCAGAATCAGTTCGATCTTCTGAGTGTTCGAGAGAAGTTA
 
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rJMSF050I14+          TCAGCCCATTTACGCTTGGTTCAACGGGGGAGGATTGAAACCAACCGAGCTTCTCAACAA
rJMFF017B14+          TCAGCCCATTTACGCTTGGTTCAACGGGGGAGGATTGAAACCAACCGAGCTTCTCAACAA
                      ____________________________________________________________
consensus             TCAGCCCATTTACGCTTGGTTCAACGGGGGAGGATTGAAACCAACCGAGCTTCTCAACAA
 
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rJMSF050I14+          GTTTCTATGTGATGTATCCTCTTACTATATAAGCTAGCATTTCCAGCCATTCAGGCATGC
rJMFF017B14+          GTTTCTATGTGATGTATCCCCTTACTATATAAGCTAGCATTTCCAGCCATTCAGGCATGC
                      ____________________________________________________________
consensus             GTTTCTATGTGATGTATCCTCTTACTATATAAGCTAGCATTTCCAGCCATTCAGGCATGC
 
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rJMSF050I14+          TCTTTTGATTCAAATACAGAAGT                                     
rJMFF017B14+          TCTTTTGATTCAAATACAGAAGTGTTAAGTGTACTTGACTAAAAATGGTACCTATATTAT
                      ____________________________________________________________
consensus             TCTTTTGATTCAAATACAGAAGTGTTAAGTGTACTTGACTAAAAATGGTACCTATATTAT