Contig 009668:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038F15+                                  CTCCGTCAAAAACCTTTTTTCGAGCAAGAGATTCAA
                      ____________________________________________________________
consensus                                     CTCCGTCAAAAACCTTTTTTCGAGCAAGAGATTCAA
 
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rJMSF038F15+          GAAGGAACTCTGGGAAGTAAACCTGCTGCAGAATTATTGGAGAAGTTGAGGCCATCCTAC
                      ____________________________________________________________
consensus             GAAGGAACTCTGGGAAGTAAACCTGCTGCAGAATTATTGGAGAAGTTGAGGCCATCCTAC
 
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rJMSF038F15+          TGGTTTTCTGCTCATCTACACTGCAAATTTGCTGCTTTGGTTCAACATGGTGAGGGCTCC
                      ____________________________________________________________
consensus             TGGTTTTCTGCTCATCTACACTGCAAATTTGCTGCTTTGGTTCAACATGGTGAGGGCTCC
 
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rJMSF038F15+          GTCACCAAATTTCTTGCTCTTGATAAATGCCTCCCTGGTCGGAACTTTTTGCAAGTTATT
rJMFF015L09+                                                  GGAACTTTTTGCAAGTTATT
                      ____________________________________________________________
consensus             GTCACCAAATTTCTTGCTCTTGATAAATGCCTCCCTGGTCGGAACTTTTTGCAAGTTATT
 
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rJMSF038F15+          GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
rJMFF015L09+          GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
                      ____________________________________________________________
consensus             GAAGTTGAGTCAGAGCCAGGACCATATGAACTCCAGTATGATGAAGAATGGCTAGCAATT
 
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rJMSF038F15+          ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
rJMFF015L09+          ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
                      ____________________________________________________________
consensus             ATGAGGAAGTTTAACTCTATCTTACCTCTGACAATTAGGCATGCAGATTATAGCAATGTA
 
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rJMSF038F15+          CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
rJMFF015L09+          CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
                      ____________________________________________________________
consensus             CAGCTTGACCTGCAAGAATGCCGTCATTTTGTAAGGAATAAACTTCAATCAAGAGGGGCC
 
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rJMSF038F15+          AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
rJMFF015L09+          AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
                      ____________________________________________________________
consensus             AAACCTTTTGATTTTGTGCGCACTGTGCCATGCCACGATCCTCGTCAACCTCTTGCTAAT
 
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rJMSF038F15+          GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
rJMFF015L09+          GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
                      ____________________________________________________________
consensus             GGTGTCTTTTCTGGTCACTGCCGAAATCCCCAAACAGAAGCCTTATTACAGCTCCTTGAA
 
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rJMSF038F15+          CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
rJMFF015L09+          CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
                      ____________________________________________________________
consensus             CTTGAATATCTTCTTGATAACATGTCAGAATCAAGGGAGTTTTCTGGAAGTCCAGCTTCA
 
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rJMSF038F15+          TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
rJMFF015L09+          TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
                      ____________________________________________________________
consensus             TTTATTTCTAGTTCGTTTGGCTATGGTACTGAAGATATCCCCATTGATGATGTGGATGAT
 
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rJMSF038F15+          ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
rJMFF015L09+          ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
                      ____________________________________________________________
consensus             ATTGATGAACCAAAAGAGGCTGATGCCAGTGAAACTGAAAATGAACAAATATAGAACTTG
 
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rJMSF038F15+          TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
rJMFF015L09+          TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
                      ____________________________________________________________
consensus             TTTATTGGTAATCCAGCTGCAATGGAAGTTCAACCAGAAGAATGTATTGTTTGTAATATG
 
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rJMSF038F15+          ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
rJMFF015L09+          ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
                      ____________________________________________________________
consensus             ATTGTAGTACTTAGATTGGTTACTAGTCTAAAATTCAGGAACTCACCTGTCACATTGATT
 
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rJMSF038F15+          GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
rJMFF015L09+          GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
                      ____________________________________________________________
consensus             GAATACCTATTGCAGCAGCAATAGTAGGTAGAATGCAAAGGCTGAGTATGCTCTGTAAAG
 
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rJMSF038F15+          AGGAGTATC                                                   
rJMFF015L09+          AGGAGTATCGTAGCAGTATAATCAGAACCACCATTACAATTTATTCAATAGACACAGATT
                      ____________________________________________________________
consensus             AGGAGTATCGTAGCAGTATAATCAGAACCACCATTACAATTTATTCAATAGACACAGATT