| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003L16 | Sequence | 546 | 012898 (16) | emb|CDP03590.1| | 2e-55 | unnamed protein product [Coffea canephora] | 650 | 009665 (5) | ref|XP_009627021.1| | 5e-48 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo |
| JMFF015I21 | Sequence | 435 | 000312 (4) | ref|XP_011082559.1| | 7e-30 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum] | 606 | 009665 (5) | ref|XP_009627021.1| | 2e-33 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo |
| JMFF024G22 | Sequence | 517 | 012898 (16) | emb|CDP03590.1| | 7e-52 | unnamed protein product [Coffea canephora] | 376 | 009665 (5) | |||
| JMFN002G07 | Sequence | 621 | 009665 (5) | ref|XP_009627021.1| | 1e-125 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo | |||||
| JMSF011C02 | Sequence | 356 | 000312 (4) | ref|XP_011082559.1| | 2e-29 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum] | 778 | 009665 (5) | ref|XP_009627021.1| | 2e-111 | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo |
This contig is upended
. : . : . : . : . : . :
JMFN002G07- CAACGCGATGCTTCTGCTGCTCTGTGCAAG
____________________________________________________________
consensus CAACGCGATGCTTCTGCTGCTCTGTGCAAG
. : . : . : . : . : . :
JMFN002G07- TTAGCTGATAAGGCCAACTCGCTTTCTCCTGTCGATGCAGCTCCTCCGTCCCCAGAACCT
rJMSF011C02+ TCGATGCAGCTCCTCCGTCCCCAGAACCT
____________________________________________________________
consensus TTAGCTGATAAGGCCAACTCGCTTTCTCCTGTCGATGCAGCTCCTCCGTCCCCAGAACCT
. : . : . : . : . : . :
JMFN002G07- CAGGTGTACCTTGGGGAGCAGTATGTAAATAATAATACACTATCGGATGTGACATTTTTA
rJMSF011C02+ CAGGTGTACCTTGGGGAGCAGTATGTAAATAATAATACACTATCGGATGTGACATTTTTA
____________________________________________________________
consensus CAGGTGTACCTTGGGGAGCAGTATGTAAATAATAATACACTATCGGATGTGACATTTTTA
. : . : . : . : . : . :
JMFN002G07- GTTGAAGGTAAACGATTTTACGCCCACAGAATTTGCTTGCTCGCATCTTCTGATGCATTT
rJMSF011C02+ GTTGAAGGTAAACGATTTTACGCCCACAGAATTTGCTTGCTCGCATCTTCTGATGCATTT
____________________________________________________________
consensus GTTGAAGGTAAACGATTTTACGCCCACAGAATTTGCTTGCTCGCATCTTCTGATGCATTT
. : . : . : . : . : . :
JMFN002G07- CGAGCGATGTTTGATGGTGGTTACAGGGAGAGGGATGCCAAAGACATTGAGATCCCAAAT
rJMSF011C02+ CGAGCGATGTTTGATGGTGGTTACAGGGAGAGGGATGCCAAAGACATTGAGATCCCAAAT
rJMFF003L16+ CCCAAAT
____________________________________________________________
consensus CGAGCGATGTTTGATGGTGGTTACAGGGAGAGGGATGCCAAAGACATTGAGATCCCAAAT
. : . : . : . : . : . :
JMFN002G07- ATCAAATGGGACGTATTTGAGTTGATGATGAGGTATGTATATACA-GGATCAGTTAACGT
rJMSF011C02+ ATCAAATGGGACGTATTTGAGTTGATGATGAGGTATGTATATACA-GGATCAGTTAACGT
rJMFF003L16+ ATCAAATGGGACGTATTTGAGTTGATGATGAGGTATGTATATACAGGGATCAGTTAACGT
____________________________________________________________
consensus ATCAAATGGGACGTATTTGAGTTGATGATGAGGTATGTATATACA-GGATCAGTTAACGT
. : . : . : . : . : . :
JMFN002G07- CAATTTGGAAATCGCACAGGATCTTCTAAGGGCTTCTGATCAGTATCTTCTCGAGGGACT
rJMSF011C02+ CAATTTGGAAATCGCACAGGATCTTCTAAGGGCTTCTGATCAGTATCTTCTCGAGGGACT
rJMFF003L16+ CAATTTGGAAATCGCACAGGATCTTCTAAGGGCTTCTGATCAGTATCTTCTCGAGGGACT
rJMFF015I21+ GGGANT
____________________________________________________________
consensus CAATTTGGAAATCGCACAGGATCTTCTAAGGGCTTCTGATCAGTATCTTCTCGAGGGACT
. : . : . : . : . : . :
JMFN002G07- AAAACGCCTATGTGAATATGCAATTGCACAGGATATTTCTGCGGAGAACGTCTCTCTCAT
rJMSF011C02+ AAAACGCCTATGTGAATATGCAATTGCACAGGATATTTCTGCGGAGAACGTCTCTCTCAT
rJMFF003L16+ AAAACGCCTATGTGAATATGCAATTGCACAGGATATTTCTGCGGAGAACGTCTCTCTCAT
rJMFF015I21+ AAAACGCCTATGTGAATATGCAATTGCACAGGATATTTCTGCGGAGAACGTCTCTCTCAT
____________________________________________________________
consensus AAAACGCCTATGTGAATATGCAATTGCACAGGATATTTCTGCGGAGAACGTCTCTCTCAT
. : . : . : . : . : . :
JMFN002G07- GTTTGAGTTGTCCGAGGCCTTTAATGCTTTATCATTAAGAAATGCTTGCATTCTTTTCAT
rJMSF011C02+ GTTTGAGTTGTCCGAGGCCTTTAATGCTTTATCATTAAGAAATGCTTGCATTCTTTTCAT
rJMFF003L16+ GTTTGAGTTGTCCGAGGCCTTTAATGCTTTATCATTAAGAAATGCTTGCATTCTTTTCAT
rJMFF015I21+ GTTTGAGTTGTCCGAGGCCTTTAATGCTTTATCATTAAGAAATGCTTGCATTCTTTTCAT
____________________________________________________________
consensus GTTTGAGTTGTCCGAGGCCTTTAATGCTTTATCATTAAGAAATGCTTGCATTCTTTTCAT
. : . : . : . : . : . :
JMFN002G07- ACTGGAGAACTTTGACAAGCTAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
rJMSF011C02+ ACTGGAGAACTTTGACAAGCTAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
rJMFF003L16+ ACTGGAGAACTTTGACAAGCTAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
rJMFF024G22+ TAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
rJMFF015I21+ ACTGGAGAACTTTGACAAGCTAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
____________________________________________________________
consensus ACTGGAGAACTTTGACAAGCTAAGTGCGATGTGCTGTTTTTCGGATTTGATTCAGCGTAT
. : . : . : . : . : . :
JMFN002G07- ATTACCAGAGACTCGCAGTTACTTCGTAAGAGCACTCACCGGAAGCTGACTT
rJMSF011C02+ ATTACCAGAGACTCGCAGTTACTTCGTAAGAGCACTCACCGGAAGCTGACTTGCGGAGGC
rJMFF003L16+ ATTACCAGAGACTCGCAGTTACTTCGTAAGAGCACTCACCGGAAGCTGACTTGCGGAGGC
rJMFF024G22+ ATTNCCAGAGACTCGCAGTTACNTCGTAAGAGCACTCACCGGAAGCTGACTTGCGGAGGC
rJMFF015I21+ ATTACCAGAGACTCGCAGTTACTTCGTAAGAGCACTCACCGGAAGCTGACTTGCGGAGGC
____________________________________________________________
consensus ATTACCAGAGACTCGCAGTTACTTCGTAAGAGCACTCACCGGAAGCTGACTTGCGGAGGC
. : . : . : . : . : . :
rJMSF011C02+ AGAAGATTATCCTGGGCCTGATTTTGTATGGTTTTTGATTAATTCTAATCTCATCCAGAA
rJMFF003L16+ AGAAGATTATCCTGGGCCTGATTTTGTATGGTTTTTGATTAATTCTAATCTCATCCAGAA
rJMFF024G22+ AGAAGATTATCCTGGGCCTGATTTTGTATGGTTTTTGATTAATTCTAATCTCATCCAGAA
rJMFF015I21+ AGAAGATTATCCTGGGCCTGATTTTGTATGGTTTTTGATTAATTCTAATCTCATCCAGAA
____________________________________________________________
consensus AGAAGATTATCCTGGGCCTGATTTTGTATGGTTTTTGATTAATTCTAATCTCATCCAGAA
. : . : . : . : . : . :
rJMSF011C02+ GAGGCAAGATGTATAAAATTGGTTAGTTTTTGTTGTAGTGGTAGTCCCAGAATGGAATTG
rJMFF003L16+ GAGGCAAGATGTATAAAATTGGTTAGTTTTTGTTGTAGTGGTAGTCCCAGAATGGAATTG
rJMFF024G22+ GAGGCAAGATGTATAAAATTGGTTAGTTTTTGTTGTAGTGGTAGTCCCAGAATGGAATTG
rJMFF015I21+ GAGGCAAGATGTATAAAATTGGTTAGTTTTTGTTGTAGTGGTAGTCCCAGAATGGAATTG
____________________________________________________________
consensus GAGGCAAGATGTATAAAATTGGTTAGTTTTTGTTGTAGTGGTAGTCCCAGAATGGAATTG
. : . : . : . : . : . :
rJMSF011C02+ CCAGATATAGCTATCTTCATCTGGAACTGGTGTTGTAATCCCCCCGGTTGAATATGAATG
rJMFF003L16+ CCAGATATAGCTATCTTCATCTGGAACTGGTGTTGTAATCCCCCCGGTTGAATATGAATG
rJMFF024G22+ CCAGATATAGCTATCTTCATCTGGAACTGGTGTTGTAATCCCCCCGGTTGAATATGAATG
rJMFF015I21+ CCAGATATAGCTATCTTCATCTGGAACTGGTGTTGTAATCCCCCCGGTTGAATATGAATG
____________________________________________________________
consensus CCAGATATAGCTATCTTCATCTGGAACTGGTGTTGTAATCCCCCCGGTTGAATATGAATG
. : . : . : . : . : . :
rJMSF011C02+ CTATTATTTCTTCCTTCACTGGCCT
rJMFF003L16+ CTATTATTTCTTCCTTCACTGGCCTTGAATGCAGGCTGCTCAGTAGTATATTTGCAGAGT
rJMFF024G22+ CTATTATTTCTTCCTTCACTGGCCTTGAATGCAGGCTGCTCAGTAGTATATTTGCAGAGT
rJMFF015I21+ CTATTATTTCTTCCTTCACTGGCCTTGAATGCAGGCTGCTCAGTAGTATATTTGCAGAGT
____________________________________________________________
consensus CTATTATTTCTTCCTTCACTGGCCTTGAATGCAGGCTGCTCAGTAGTATATTTGCAGAGT
. : . : . : . : . : . :
rJMFF003L16+ TATTTTCACTTTTGGTGCTACGAGTATGTGACTAT
rJMFF024G22+ TATTTTCACTTTTGGTGCTACGAGTATGTGACTAT
rJMFF015I21+ TATTTTCACTTTTGGTGCTACGAGTATGTGACTATTTTCATATTTGATCCTTGAACATTT
____________________________________________________________
consensus TATTTTCACTTTTGGTGCTACGAGTATGTGACTATTTTCATATTTGATCCTTGAACATTT
. : . : . : . : . : . :
rJMFF015I21+ ANGGACTAAATTCAGTAGCTCATATTAGGTGCCTTGAAAAAACAAACTGAAGGAGCTCAT
____________________________________________________________
consensus ANGGACTAAATTCAGTAGCTCATATTAGGTGCCTTGAAAAAACAAACTGAAGGAGCTCAT