clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF008K19 | Sequence | 549 | 013317 (5) | ref|XP_009758209.1| | 1e-44 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri | 650 | 009662 (5) | ref|XP_009758209.1| | 6e-61 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
JMFF014P07 | Sequence | 573 | 013317 (5) | ref|XP_009631029.1| | 2e-36 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi | 653 | 009662 (5) | ref|XP_009758209.1| | 7e-60 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
JMFF018L02 | Sequence | 580 | 013317 (5) | ref|XP_009758209.1| | 4e-45 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri | 253 | 009662 (5) | ref|XP_009608371.1| | 2e-06 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi |
JMSF017D21 | Sequence | 261 | 013317 (5) | 724 | 009662 (5) | emb|CDP17860.1| | 3e-63 | unnamed protein product [Coffea canephora] | |||
JMSF027G21 | Sequence | 653 | 013317 (5) | ref|XP_009631025.1| | 2e-38 | PREDICTED: WD repeat-containing protein 26-like isoform X1 [Nicotiana tomentosi | 776 | 009662 (5) | ref|XP_009758209.1| | 5e-115 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF027G21+ GTCTCCCGATGGCAAAAGGATATTTACTGGCGTTACTGA
____________________________________________________________
consensus GTCTCCCGATGGCAAAAGGATATTTACTGGCGTTACTGA
. : . : . : . : . : . :
rJMSF027G21+ CAAAAGCATTAGCATGTGGGATCTTGATGGAAATGAGTTGGAATGTTGGAAAGGGCAAAG
____________________________________________________________
consensus CAAAAGCATTAGCATGTGGGATCTTGATGGAAATGAGTTGGAATGTTGGAAAGGGCAAAG
. : . : . : . : . : . :
rJMSF027G21+ GACTATTAGAACTTCTGATATTGGGATCACTACCGATGGGAAACAGATCGTTTCTGTTCA
____________________________________________________________
consensus GACTATTAGAACTTCTGATATTGGGATCACTACCGATGGGAAACAGATCGTTTCTGTTCA
. : . : . : . : . : . :
rJMSF027G21+ TAAAGAGAAAACAATACTGTTATTTGGATGGGAATCAAAAGCTGAGAAATCAATTAAGGA
rJMSF017D21+ GGGAATCAAAAGCTGAGAAATCAATTAAGGA
____________________________________________________________
consensus TAAAGAGAAAACAATACTGTTATTTGGATGGGAATCAAAAGCTGAGAAATCAATTAAGGA
. : . : . : . : . : . :
rJMSF027G21+ GGATCAAGTTATAACCTCA-TTTGTATTATCCAAGGACAGCAAGTACC-TTTTGGTTAGT
rJMSF017D21+ GGATCAAGTTATAACCTCATTTTGTATTATCCAAGGNCAGCAAGTACCTTTTTGGTTAGT
rJMFF008K19+ GT
____________________________________________________________
consensus GGATCAAGTTATAACCTCATTTTGTATTATCCAAGGACAGCAAGTACCTTTTTGGTTAGT
. : . : . : . : . : . :
rJMSF027G21+ CTGCTTAACCAAGAAATTCATCTTTGGAATATCGATGGAAGTGTGACATGCATAGCCAAA
rJMSF017D21+ CTGCTTAACCAAGAAATTCATCTTTGGAATATCGATGGAAGTGTGACATGCATAGCCAAA
rJMFF008K19+ CTGCTTAACCAAGAAATTCATCTTTGGAATATCGATGGAAGTGTGACATGCATAGCCAAA
rJMFF014P07+ ACCAAGAAATTCATCTTTGGAATATCGATGGAAGTGTGACATGCATAGCCAAA
____________________________________________________________
consensus CTGCTTAACCAAGAAATTCATCTTTGGAATATCGATGGAAGTGTGACATGCATAGCCAAA
. : . : . : . : . : . :
rJMSF027G21+ TTTAAAGGCCACAAACGCAATCGCTTTGTTGTAAGGTCATGTTTTGGTGGATTAGATGAA
rJMSF017D21+ TTTAAAGGCCACAAACGCAATCGCTTTGTTGTAAGGTCATGTTTTGGTGGATTAGATGAA
rJMFF008K19+ TTTAAAGGCCACAAACGCAATCGCTTTGTTGTAAGGTCATGTTTTGGTGGATTAGATGAA
rJMFF014P07+ TTTAAAGGCCACAAACGCAATCGCTTTGTTGTAAGGTCATGTTTTGGTGGATTAGATGAA
____________________________________________________________
consensus TTTAAAGGCCACAAACGCAATCGCTTTGTTGTAAGGTCATGTTTTGGTGGATTAGATGAA
. : . : . : . : . : . :
rJMSF027G21+ GCATTTATTGCAAGTGGAAGTGAGGACTCGCAGGTCTATATATGGCATAGAAGCTCGGGT
rJMSF017D21+ GCATTTATTGCAAGTGGAAGTGAGGACTCGCAGGTCTATATATGGCATAGAAGCTCGGGT
rJMFF008K19+ GCATTTATTGCAAGTGGAAGTGAGGACTCGCAGGTCTATATATGGCATAGAAGCTCGGGT
rJMFF014P07+ GCATTTATTGCAAGTGGAAGTGAGGACTCGCAGGTCTATATATGGCATAGAAGCTCGGGT
____________________________________________________________
consensus GCATTTATTGCAAGTGGAAGTGAGGACTCGCAGGTCTATATATGGCATAGAAGCTCGGGT
. : . : . : . : . : . :
rJMSF027G21+ GAACTTGTTGGGACATTGCATGGGCATTCCGGGACTGTCAACTGCGTGAGCTGGAATGGA
rJMSF017D21+ GAACTTGTTGGGACATTGCATGGGCATTCCGGGACTGTCAACTGCGTGAGCTGGAATGGA
rJMFF008K19+ GAACTTGTTGGGACATTGCATGGGCATTCCGGGACTGTCAACTGCGTGAGCTGGAATGGA
rJMFF014P07+ GAACTTGTTGGGACATTGCATGGGCATTCCGGGACTGTCAACTGCGTGAGCTGGAATGGA
____________________________________________________________
consensus GAACTTGTTGGGACATTGCATGGGCATTCCGGGACTGTCAACTGCGTGAGCTGGAATGGA
. : . : . : . : . : . :
rJMSF027G21+ GCAAACCCTCATATGCTGGCCTCTGCAAGTGATGATCGAACAATTCGGATATGGGGATTG
rJMSF017D21+ GCAAACCCTCATATGCTGGCCTCTGCAAGTGATGATCGAACAATTCGGATATGGGGATTG
rJMFF008K19+ GCAAACCCTCATATGCTGGCCTCTGCAAGTGATGATCGAACAATTCGGATATGGGGATTG
rJMFF014P07+ GCAAACCCTCATATGCTGGCCTCTGCAAGTGATGATCGAACAATTCGGATATGGGGATTG
____________________________________________________________
consensus GCAAACCCTCATATGCTGGCCTCTGCAAGTGATGATCGAACAATTCGGATATGGGGATTG
. : . : . : . : . : . :
rJMSF027G21+ AAGCAGGTAAACGTGCAGCAAAACTGTAC
rJMSF017D21+ AAGCAGGTAAACTTGAAGCAAAACAGTACGGTTTGTAATGGTGTCCACCATTGCAATGGT
rJMFF008K19+ AAGCAGGTAAACTTGAAGCAAAACAGTACGGTTTGTAATGGTGTCCACCATTGCAATGGT
rJMFF014P07+ AAGCAGGTAAACTTGAAGCAAAACAGTACGGTTTGTAATGGTGTCCACCATTGCAATGGT
____________________________________________________________
consensus AAGCAGGTAAACTTGAAGCAAAACAGTACGGTTTGTAATGGTGTCCACCATTGCAATGGT
. : . : . : . : . : . :
rJMSF017D21+ GGATCATGAAACTGTTGGGTGTTTTACCTAAGGCGGTTCGTTTTCTTCCATTGATGGTTG
rJMFF008K19+ GGATCATGAAACTG-GGGGTGTTTTACCTAAGGCGGTTCGTTTTCTTCCATTGATGGTTG
rJMFF014P07+ GGATCATGAAACTGTTGGGTGTTTTACCTAAGGCGGTTCGTTTTCTTCCATTGATGGTTG
____________________________________________________________
consensus GGATCATGAAACTGTTGGGTGTTTTACCTAAGGCGGTTCGTTTTCTTCCATTGATGGTTG
. : . : . : . : . : . :
rJMSF017D21+ CTTTCGTGTAAATCCTTTACAGGTAAACGTGCAGCAAAACTGTACCGTCAGGACGGTTAG
rJMFF008K19+ CTTTCGTGTAAATCCTTTACAGGTAAACGTGCAGCAAAACTGTACCGTCAGGACGGTTAG
rJMFF018L02+ CAGGTAAACGTGCAGCAAAACTGTACCGTCAGGACGGTTAG
rJMFF014P07+ CTTTCGTGTAAATCCTTTACAGGTAAACGTGCAGCAAAACTGTACCGTCAGGACGGTTAG
____________________________________________________________
consensus CTTTCGTGTAAATCCTTTACAGGTAAACGTGCAGCAAAACTGTACCGTCAGGACGGTTAG
. : . : . : . : . : . :
rJMSF017D21+ TAATGGTGTCCACCATTGCAATGGTGGATTGTGAAACTCGTCTTTTACCTAAAAGCGGTT
rJMFF008K19+ TAATGGTGTCCACCATTGCAATGGTGGATTGTGAAACTCGTCTTTTACCTAAAAGCGGTT
rJMFF018L02+ TAATGGTGTCCACCATTGCAATGGTGGATTGTGAAACTCGTCTTTTACCTAAAAGCGGTT
rJMFF014P07+ TAATGGTGTCCACCATTGCAATGGTGGATTGTGAAACTCGTCTTTTACCTAAAAGCGGTT
____________________________________________________________
consensus TAATGGTGTCCACCATTGCAATGGTGGATTGTGAAACTCGTCTTTTACCTAAAAGCGGTT
. : . : . : . : . : . :
rJMSF017D21+ TCTTCCATTGATGATTGCTTTCGTGTAAATTCTTTTACTGCCTACTTCTTTGTCAACCTG
rJMFF008K19+ TCTTCCATTGATGATTGCTTTCGTGTAAATTCTTTTACTGCCTACTTCTTTGTCAACCTG
rJMFF018L02+ TCTTCCATTGATGATTGCTTTCGTGTAAATTCTTTTACTGCCTACTTCTTTGTCAACCTG
rJMFF014P07+ TCTTCCATTGATGATTGCTTTCGTGTAAATTCTTTTACTGCCTACTTCTTTGTCAACCTG
____________________________________________________________
consensus TCTTCCATTGATGATTGCTTTCGTGTAAATTCTTTTACTGCCTACTTCTTTGTCAACCTG
. : . : . : . : . : . :
rJMSF017D21+ ACTTGTTATATCTAACAAGAATGTGGAGTGCAC
rJMFF008K19+ ACTTGTTATATCTAACAAGAATGTGGAGTGCACATTCACTTACAGTAAT
rJMFF018L02+ ACTTGTTATATCTAACAAGAATGTGGAGTGCACATTCACTTACAGTAAT
rJMFF014P07+ ACTTGTTATATCTAACAAGAATGTGGAGTGCACATTCACTTACAGTAATAAATCCAGACT
____________________________________________________________
consensus ACTTGTTATATCTAACAAGAATGTGGAGTGCACATTCACTTACAGTAATAAATCCAGACT