| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009H12 | Sequence | 551 | 013220 (4) | ref|XP_006344289.1| | 6e-45 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum tuberosum] | 708 | 009661 (3) | ref|XP_004236995.1| | 1e-53 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
| JMFF014J18 | Sequence | 554 | 013220 (4) | ref|XP_006344289.1| | 2e-45 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum tuberosum] | 818 | 009661 (3) | ref|XP_004236995.1| | 4e-78 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
| JMFF032I17 | Sequence | 573 | 013220 (4) | ref|XP_004236995.1| | 7e-49 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] | 803 | 009661 (3) | ref|XP_004236995.1| | 2e-74 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF032I17+ GGCTCCAAAAGGA
____________________________________________________________
consensus GGCTCCAAAAGGA
. : . : . : . : . : . :
rJMFF032I17+ AGATGANGATTTCAAGGATCGTTCTCGATGATGCTGGTAAGCCAGTGACTGTTGAAGAGG
rJMFF014J18+ TCTCGATGATGCTGGTAAGCCAGTGACTGTTGAAGAGG
____________________________________________________________
consensus AGATGANGATTTCAAGGATCGTTCTCGATGATGCTGGTAAGCCAGTGACTGTTGAAGAGG
. : . : . : . : . : . :
rJMFF032I17+ TACTGACAATACACATCAAGCNTGGTTGGAAGAAAGGCACAAAGATCACTTTCCCTGAGA
rJMFF014J18+ TACTGACAATACACATCAAGCCTGNTTGGAAGAAAGGCACAAAGATCACTTTCCTTGAGA
____________________________________________________________
consensus TACTGACAATACACATCAAGCCTGGTTGGAAGAAAGGCACAAAGATCACTTTCCTTGAGA
. : . : . : . : . : . :
rJMFF032I17+ AAGGGGACTATGAAGCAGGTGCTGCCCCTGGAGATCTTATTTTCGTTGTTGATGAGAAAC
rJMFF009H12+ CCCCTGGAGATCTTATTTTCGTTGTTGATGAGAAAC
rJMFF014J18+ AAGGGGACTATGAAGCAGGTGCTGCCCCTGGAGATCTTATTTTCGTTGTTGATGAGAAAC
____________________________________________________________
consensus AAGGGGACTATGAAGCAGGTGCTGCCCCTGGAGATCTTATTTTCGTTGTTGATGAGAAAC
. : . : . : . : . : . :
rJMFF032I17+ CCCACGGACTGTTCAAGAGGGATGGGAACGACCTCGTTATCCATCACAAGATTTCCTTAC
rJMFF009H12+ CCCACGGACTGTTCAAGAGGGATGGGAACGACCTCGTTATCCATCACAAGATTTCCTTAC
rJMFF014J18+ CCCACGGACTGTTCAAGAGGGATGGGAACGACCTCGTTATCCATCACAAGATTTCCTTAC
____________________________________________________________
consensus CCCACGGACTGTTCAAGAGGGATGGGAACGACCTCGTTATCCATCACAAGATTTCCTTAC
. : . : . : . : . : . :
rJMFF032I17+ TGGATGCTCTCACAGGGAAGACAATCAAATTGACGAGCTTGGATGGAAGAGATGTGACGG
rJMFF009H12+ TGGATGCTCTCNCAGGGAAGACAATCAAATTGACGAGCTTGGATGGAAGAGATGTGACGG
rJMFF014J18+ TGGATGCTCTCNCAGGGAAGACAATCAAATTGACGAGCTTGGATGGAAGAGATGTGACGG
____________________________________________________________
consensus TGGATGCTCTCACAGGGAAGACAATCAAATTGACGAGCTTGGATGGAAGAGATGTGACGG
. : . : . : . : . : . :
rJMFF032I17+ TAGAGATTTCAGAGATTGTGAAGCCAGGACAGGAGAAAGTAATCCCGGATGAAGGGATGC
rJMFF009H12+ TAGAGATTTCAGAGATTGTGAAGCCAGGACAGGAGAAAGTAATCCCGGATGAAGGGATGC
rJMFF014J18+ TAGAGATTTCAGAGATTGTGAAGCCAGGACAGGAGAAAGTAATCCCGGATGAAGGGATGC
____________________________________________________________
consensus TAGAGATTTCAGAGATTGTGAAGCCAGGACAGGAGAAAGTAATCCCGGATGAAGGGATGC
. : . : . : . : . : . :
rJMFF032I17+ CAATATCCAAGGAGCCCGGTAAGAAAGGGAATTTGAGGATCAAGTTCGACATGAAATTCC
rJMFF009H12+ CAATATCCAAGGAGCCCGGTAAGAAAGGGAATTTGAGGATCAAGTTCGACATAAAATTCC
rJMFF014J18+ CAATATCCAAGGAGCCCGGTAAGAAAGGGAATTTGAGGATCAAGTTCGACATAAAATTCC
____________________________________________________________
consensus CAATATCCAAGGAGCCCGGTAAGAAAGGGAATTTGAGGATCAAGTTCGACATAAAATTCC
. : . : . : . : . : . :
rJMFF032I17+ CTTCGAGGTTGAGTGCAGATCAGAAGTGTGATCTGAGGAGAGTTCTGGGCAGGCATGCTC
rJMFF009H12+ CTTCGAGGTTGAGTGCAGATCAGAAGTGTGATCTGAGGAGAGTTCTGGGCAGGCATGCTC
rJMFF014J18+ CTTCGAGGTTGAGTGCAGATCAGAAGTGTGATCTGAGGAGAGTTCTGGGCAGGCATGCTC
____________________________________________________________
consensus CTTCGAGGTTGAGTGCAGATCAGAAGTGTGATCTGAGGAGAGTTCTGGGCAGGCATGCTC
. : . : . : . : . : . :
rJMFF032I17+ AATAGTGAAAGGGTAAGGTAAGGTATATTTGTTAACTGTGGCTAACAAAGTTAGGGAAAG
rJMFF009H12+ AATAGTGAAAGGGTAAGGTAAGGTATATTTGTTAACTGTGGCTAACAAAGTTAGGGAAAG
rJMFF014J18+ AATAGTGAAAGGGTAAGGTAAGGTATATTTGTTAACTGTGGCTAACAAAGTTAGGGAAAG
____________________________________________________________
consensus AATAGTGAAAGGGTAAGGTAAGGTATATTTGTTAACTGTGGCTAACAAAGTTAGGGAAAG
. : . : . : . : . : . :
rJMFF032I17+ TGAAATACAAGGCAGGAATGTAAATATATCTGATATGTGGGAAGGAGAGAGAAATGTGCA
rJMFF009H12+ TGAAATACAAGGCAGGAATGTAAATATATCTGATATGTGGGAAGGAGAGAGAAATGTGCA
rJMFF014J18+ TGAAATACAAGGCAGGAATGTAAATATATCTGATATGTGGGAAGGAGAGAGAAATGTGCA
____________________________________________________________
consensus TGAAATACAAGGCAGGAATGTAAATATATCTGATATGTGGGAAGGAGAGAGAAATGTGCA
. : . : . : . : . : . :
rJMFF032I17+ TACAAGATATATATTATATGTAGTAGGGAAGAAGAAGATAGTTTGAAGAATTCCTCGAGG
rJMFF009H12+ TACAAGATATATATTATATGTAGTAGGGAAGAAGAAGATAGTTTGAAGAATTCCTCGAGG
rJMFF014J18+ TACAAGATATATATTATATGTAGTAGGGAAGAAGAAGATAGTTTGAAGAATTCCTNGAGG
____________________________________________________________
consensus TACAAGATATATATTATATGTAGTAGGGAAGAAGAAGATAGTTTGAAGAATTCCTCGAGG
. : . : . : . : . : . :
rJMFF032I17+ CACTTACTATTATTTAGCTGCCACCAGACACCCACCGGTTAATTATTCGTGTTGGTTGTG
rJMFF009H12+ CACTTACTATTATTTAGCTGCCACCAGACACCCACCGGTTAATTATTCGTGTTGGTTGTG
rJMFF014J18+ CACTTACTATTATTTAGCTGCCACCAGACACCCACCGGTTAATTATTCGTGTTGGTTGTG
____________________________________________________________
consensus CACTTACTATTATTTAGCTGCCACCAGACACCCACCGGTTAATTATTCGTGTTGGTTGTG
. : . : . : . : . : . :
rJMFF032I17+ GAATATGTTTGTATTGTAATAATGTTTTTCTTGGATATGGATATGCCTATATAGTCAATC
rJMFF009H12+ GAATATGTTTGTATTGTAATAATGTTTTTCTTGGATATGGATATGCCTATATAGTCAATC
rJMFF014J18+ GAATATGTTTGTATTGTAATAATGTTTTTCTTGGATATGGATATGCCTATATAGTCAATC
____________________________________________________________
consensus GAATATGTTTGTATTGTAATAATGTTTTTCTTGGATATGGATATGCCTATATAGTCAATC
. : . : . : . : . : . :
rJMFF032I17+ AATTTCAGAG
rJMFF009H12+ AATTTCAGAGTGAGAATTTTCAATTACTAAGAAAATTCTTCATCTATAAATG
rJMFF014J18+ AATTTCAGAGTGAGAATTTTCAATTACTAAGAAAATTCTTCATCTATAAATGCATAGATA
____________________________________________________________
consensus AATTTCAGAGTGAGAATTTTCAATTACTAAGAAAATTCTTCATCTATAAATGCATAGATA