Contig 009658:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013K07Sequence583007825 (3)ref|XP_009764253.1|2e-13PREDICTED: probable receptor-like protein kinase At1g80640 [Nicotiana sylvestri658009658 (2)gb|ABU43071.1|7e-54wilt-resistance protein [Gossypium barbadense]
JMSF015G24Sequence262007825 (3)775009658 (2)gb|ABU43071.1|8e-79wilt-resistance protein [Gossypium barbadense]

Alignment

This contig is upended


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rJMSF015G24+                                                   TTCTGGATTCCAACTTCAA
                      ____________________________________________________________
consensus                                                      TTCTGGATTCCAACTTCAA
 
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rJMSF015G24+          TGCCAAGCTTCAGATTTTGGCCTCGCTGTGCCAGATGGGGCCCAAAACAAGAACGACGCC
                      ____________________________________________________________
consensus             TGCCAAGCTTCAGATTTTGGCCTCGCTGTGCCAGATGGGGCCCAAAACAAGAACGACGCC
 
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rJMSF015G24+          AAGCTCTCGGGAACCTTAGGATATGTAGCTCCAGAATACCTATTAGACGGAAAGTTAACT
                      ____________________________________________________________
consensus             AAGCTCTCGGGAACCTTAGGATATGTAGCTCCAGAATACCTATTAGACGGAAAGTTAACT
 
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rJMSF015G24+          GATAAAAGCGATGTTTATGCATTTGGAGTTGTACTTTTGGAGCTTCTACTAGGAAGAAGG
rJMFF013K07+            TAAAAGCGATGTTTATGCATTTGGAGTTGTACTTTTGGAGCTTCTACTAGGAAGAAGG
                      ____________________________________________________________
consensus             GATAAAAGCGATGTTTATGCATTTGGAGTTGTACTTTTGGAGCTTCTACTAGGAAGAAGG
 
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rJMSF015G24+          GCGATGGAGAAACTGGCACAAGGTCAGTGCCAATCCATTGTGTCATGGGCAATGCCGGAG
rJMFF013K07+          GCGATGGAGAAACTGGCACAAGGTCAGTGCCAATCCATTGTGTCATGGGCAATGCCGGAG
                      ____________________________________________________________
consensus             GCGATGGAGAAACTGGCACAAGGTCAGTGCCAATCCATTGTGTCATGGGCAATGCCGGAG
 
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rJMSF015G24+          CTCACAGATAGATCAAAGCTCCCGAACATCGTGGATTCAGTGATCAGAAATACAATGGAT
rJMFF013K07+          CTCACAGATAGATCAAAGCTCCCGAACATCGTGGATTCAGTGATCAGAAATACAATGGAT
                      ____________________________________________________________
consensus             CTCACAGATAGATCAAAGCTCCCGAACATCGTGGATTCAGTGATCAGAAATACAATGGAT
 
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rJMSF015G24+          TTAAAGCATTTATACCAGGTTGCAGCAGTAGCTGTGCTATGTGTCCAACCGGAGCCAAGT
rJMFF013K07+          TTAAAGCATTTATACCAGGTTGCAGCAGTAGCTGTGCTATGTGTCCAACCGGAGCCAAGT
                      ____________________________________________________________
consensus             TTAAAGCATTTATACCAGGTTGCAGCAGTAGCTGTGCTATGTGTCCAACCGGAGCCAAGT
 
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rJMSF015G24+          TATCGTCCATTGATAACAGATGTGCTGCATTCTCTTATCCCCCTCGTTCCAATTGAGTTG
rJMFF013K07+          TATCGTCCATTGATAACAGATGTGCTGCATTCTCTCATCCCCCTCGTTCCAATTGAGTTG
                      ____________________________________________________________
consensus             TATCGTCCATTGATAACAGATGTGCTGCATTCTCTTATCCCCCTCGTTCCAATTGAGTTG
 
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rJMSF015G24+          GGCGGGACGCTTAGAGCTTCTGCGACTGCACAAAACTCATGATTCTGGGAATGGAAGGAA
rJMFF013K07+          GGCGGGACGCTTAGAGCTTCTGCGACTGCACAAAACTCATGATTCTGGGAATGGAAGGAA
                      ____________________________________________________________
consensus             GGCGGGACGCTTAGAGCTTCTGCGACTGCACAAAACTCATGATTCTGGGAATGGAAGGAA
 
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rJMSF015G24+          GTCTGCATCTTAGGACACTGCTCACTTCAATCTGTTTCTTGGCACAATATTTTGGTGATA
rJMFF013K07+          GTCTGCATCTTAGGACACTGCTCACTTCAATCTGTTTCTTGGCACAATATTTTGGTGATA
                      ____________________________________________________________
consensus             GTCTGCATCTTAGGACACTGCTCACTTCAATCTGTTTCTTGGCACAATATTTTGGTGATA
 
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rJMSF015G24+          GTAAGCTGACAGAAGAAGAAGAATAAGAAGGTGAAGAAGGGACATTATTGGGCATTGCTA
rJMFF013K07+          GTAAGCTGACAGAAGAAGAAGAATAAGAAGGTGAAGAAGGGACATTATTGGGCATTGCTA
                      ____________________________________________________________
consensus             GTAAGCTGACAGAAGAAGAAGAATAAGAAGGTGAAGAAGGGACATTATTGGGCATTGCTA
 
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rJMSF015G24+          ATTGGAATGGAATATATTTTATTTGTGAGTGAGAGTATTATTCATTACCTTGTATATTGA
rJMFF013K07+          ATTGGAATGGAATATATTTTATTTGTGAGTGAGAGTATTATTCATTACCTTGTATATTGA
                      ____________________________________________________________
consensus             ATTGGAATGGAATATATTTTATTTGTGAGTGAGAGTATTATTCATTACCTTGTATATTGA
 
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rJMSF015G24+          TTGATTGAAGCCACACCCACCATGTGTAATTTAATTTGTTCTTTCTCACACTGGTGTACA
rJMFF013K07+          TTGATTGAAGCCACACCCACCATGTGTAATTTAATTTGTTCTTTCTCACACTGGTGTACA
                      ____________________________________________________________
consensus             TTGATTGAAGCCACACCCACCATGTGTAATTTAATTTGTTCTTTCTCACACTGGTGTACA
 
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rJMSF015G24+          TATCAAGTGCCCTCCCAGAAACACACTG                                
rJMFF013K07+          TATCAAGTGCCCTCCCAGAAACACACTGTATTTGCAGATTTCCCATNAAAATCAAAAAAA
                      ____________________________________________________________
consensus             TATCAAGTGCCCTCCCAGAAACACACTGTATTTGCAGATTTCCCATNAAAATCAAAAAAA