Contig 009656:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013F08Sequence579005930 (14)ref|XP_007202636.1|1e-99hypothetical protein PRUPE_ppa012070mg [Prunus persica] gb|EMJ03835.1| hypotheti293009656 (3)
JMFF019J15Sequence523005930 (14)ref|XP_007202636.1|2e-87hypothetical protein PRUPE_ppa012070mg [Prunus persica] gb|EMJ03835.1| hypotheti283009656 (3)
JMSF009I17Sequence372005930 (14)ref|NP_001189724.1|9e-09calmodulin 2 [Arabidopsis thaliana] gb|AEC09933.1| calmodulin 2 [Arabidopsis tha311009656 (3)

Alignment

This contig is upended


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rJMSF009I17+                                TGNGGNATTTGTCNAGGNCCNGNTGGCCNAGGGNGNAC
                      ____________________________________________________________
consensus                                   TGNGGNATTTGTCNAGGNCCNGNTGGCCNAGGGNGNAC
 
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rJMSF009I17+          CTGNTCNATCCCGAANTTNATNTTTNGAATTTAAAAAAAAAAAAAATCAAAACCAAAAAA
rJMFF019J15+                                           AAAAAAAAAAAAATCAAAACCAAAAAA
rJMFF013F08+                                           AAAAAAAAAAAAATCAAAACCAAAAAA
                      ____________________________________________________________
consensus             CTGNTCNATCCCGAANTTNATNTTTNGAATTTAAAAAAAAAAAAAATCAAAACCAAAAAA
 
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rJMSF009I17+          ACAAAAAACAAAAAAATGAAAAAGGAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
rJMFF019J15+          ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
rJMFF013F08+          ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
                      ____________________________________________________________
consensus             ACAAAAAACAAAAAAATGAAAAAGAAACAGGGCATATAAGCTTGAGATTTCATTTCTTGT
 
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rJMSF009I17+          TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
rJMFF019J15+          TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
rJMFF013F08+          TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
                      ____________________________________________________________
consensus             TAGGATGCGTTCTTTGGTGCTATTAACTTTGTTTGGGTGTTTCTCTGTTTTCTCATTTGC
 
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rJMSF009I17+          ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
rJMFF019J15+          ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
rJMFF013F08+          ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
                      ____________________________________________________________
consensus             ATTGTTTGTAGTGCTACTCTTTGGTGATTTTGTTTGCTCTACCCCTTGTTTTTAGCATTC
 
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rJMSF009I17+          CGGGTTGTACTCACTTCTGGTACTT                                   
rJMFF019J15+          CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGACCCTATCAT             
rJMFF013F08+          CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGAACCTATCATTTATGCACTTCTG
                      ____________________________________________________________
consensus             CGGGTTGTACTCACTTCTGGTACTTTCTTCCCCTTTGACCCTATCATTTATGCACTTCTG