Contig 009648:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A15Sequence531009648 (2)ref|XP_004232478.1|5e-67PREDICTED: peptide methionine sulfoxide reductase A5 [Solanum lycopersicum] gb|728009648 (2)ref|XP_004232478.1|2e-113PREDICTED: peptide methionine sulfoxide reductase A5 [Solanum lycopersicum] gb|

Alignment

This contig is upended


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JMFF012A15-                                   ACGTGTGAAGAATAGCACAGGATCAATTCTCAGAAC
                      ____________________________________________________________
consensus                                     ACGTGTGAAGAATAGCACAGGATCAATTCTCAGAAC
 
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JMFF012A15-           TTATTTGTTTTCCGGCAAGTCCGCCTTCTCCGGCCGGTTTCCGTTCCGCTGTTCTATTCC
                      ____________________________________________________________
consensus             TTATTTGTTTTCCGGCAAGTCCGCCTTCTCCGGCCGGTTTCCGTTCCGCTGTTCTATTCC
 
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JMFF012A15-           CCAATGAAGGTCGCTGGAAGATTTGCATTTCTCTCCTCCGTTACAAGTAATTTCCTTTTC
                      ____________________________________________________________
consensus             CCAATGAAGGTCGCTGGAAGATTTGCATTTCTCTCCTCCGTTACAAGTAATTTCCTTTTC
 
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JMFF012A15-           CTAACTGTTTTATTGTTCACAAGTCCAACTGTAAGCATCAGGTTATCGGATCGGACCCTC
                      ____________________________________________________________
consensus             CTAACTGTTTTATTGTTCACAAGTCCAACTGTAAGCATCAGGTTATCGGATCGGACCCTC
 
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JMFF012A15-           GAGTCTCCGGCGGATCCGTTCAATCGCCCCTTGAAAACAGCGGTTTTTGCTCTGGGAAGC
rJMFF012A15+                                                              TGGGAAGC
                      ____________________________________________________________
consensus             GAGTCTCCGGCGGATCCGTTCAATCGCCCCTTGAAAACAGCGGTTTTTGCTCTGGGAAGC
 
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JMFF012A15-           TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
rJMFF012A15+          TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
                      ____________________________________________________________
consensus             TTTTGGAGGTCCGAGGCGGTGTTTGGTTGCTTAGACGGCGTCGTCAGAACTACCGCCGGC
 
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JMFF012A15-           TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
rJMFF012A15+          TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
                      ____________________________________________________________
consensus             TATGCCGGAGGGTCCAGGAGCAACCCCGAGTACCGCAACTTGGGCGACCACGCCGAGTGT
 
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JMFF012A15-           GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTANACAACTGCTGGAGGTCTTCTGG
rJMFF012A15+          GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTAGACAACTGCTGGAGGTCTTCTGG
                      ____________________________________________________________
consensus             GTGCAGATTGAGTACGATCCTGGATTGGTTAGTTTTAGACAACTGCTGGAGGTCTTCTGG
 
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JMFF012A15-           TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
rJMFF012A15+          TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
                      ____________________________________________________________
consensus             TCAAGCCACGATTCTAGGCAAGTCTTCGGGCAAGGCCCTGATGTGGGTAACCAGTACAGG
 
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JMFF012A15-           TCTATCATATTCACA                                             
rJMFF012A15+          TCTATCATATTCACAAATGCAACCGAGGAGGCCAGATTGGCTGGGGTCAGCAAAGAACGA
                      ____________________________________________________________
consensus             TCTATCATATTCACAAATGCAACCGAGGAGGCCAGATTGGCTGGGGTCAGCAAAGAACGA
 
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rJMFF012A15+          GAGCAATCAAGGTCCAGGAGCAGCATTGTCACTACTCAAATTCAACAGCTAGAAACATTT
                      ____________________________________________________________
consensus             GAGCAATCAAGGTCCAGGAGCAGCATTGTCACTACTCAAATTCAACAGCTAGAAACATTT
 
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rJMFF012A15+          TACCCTGCAGAGCCTGAACATCAGAAATTTGAGCTGAAACGGAATCCATTCCTTCTTCAG
                      ____________________________________________________________
consensus             TACCCTGCAGAGCCTGAACATCAGAAATTTGAGCTGAAACGGAATCCATTCCTTCTTCAG
 
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rJMFF012A15+          TTGATGGGGAACATGCCCGAGGAAGAGCTAGAGACATCAACAATGGCAGCAAAACTAAAT
                      ____________________________________________________________
consensus             TTGATGGGGAACATGCCCGAGGAAGAGCTAGAGACATCAACAATGGCAGCAAAACTAAAT
 
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rJMFF012A15+          GGCTATGCAGCAGAACTTTGCCCTCCAAGGATCCAAAAGCAGATTGATGCAAAGATTAAT
                      ____________________________________________________________
consensus             GGCTATGCAGCAGAACTTTGCCCTCCAAGGATCCAAAAGCAGATTGATGCAAAGATTAAT
 
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rJMFF012A15+          GATATCATCAAGAAAGGCTGGCCTGTTTTGAAAGACATATAGCCCCCAGACATTGACCAA
                      ____________________________________________________________
consensus             GATATCATCAAGAAAGGCTGGCCTGTTTTGAAAGACATATAGCCCCCAGACATTGACCAA
 
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rJMFF012A15+          GGTTTATACCATGTTGTGGGTGAAGGATAGATAATATGATTAAGCTTTGAATTCTTAAAA
                      ____________________________________________________________
consensus             GGTTTATACCATGTTGTGGGTGAAGGATAGATAATATGATTAAGCTTTGAATTCTTAAAA
 
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rJMFF012A15+          GGAAGGTGACCATGTTTTTGAAGTGATTATCACAATATCTTGAAAAACACATTATTCAGT
                      ____________________________________________________________
consensus             GGAAGGTGACCATGTTTTTGAAGTGATTATCACAATATCTTGAAAAACACATTATTCAGT