Contig 009647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M07Sequence510006585 (10)emb|CDP15943.1|3e-71unnamed protein product [Coffea canephora]639009647 (8)gb|KDO63393.1|2e-60hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMFF014H17Sequence583006585 (10)emb|CDP15943.1|2e-80unnamed protein product [Coffea canephora]709009647 (8)gb|KDO63393.1|4e-69hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF020B17Sequence596006585 (10)emb|CDP15943.1|9e-80unnamed protein product [Coffea canephora]762009647 (8)gb|KDO63393.1|2e-84hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF021D11Sequence596006585 (10)emb|CDP15943.1|9e-80unnamed protein product [Coffea canephora]777009647 (8)gb|KDO63393.1|6e-91hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF030A20Sequence663006585 (10)emb|CDP15943.1|1e-83unnamed protein product [Coffea canephora]696009647 (8)gb|KDO63393.1|3e-73hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF031M12Sequence646006585 (10)emb|CDP15943.1|1e-79unnamed protein product [Coffea canephora]762009647 (8)gb|KDO63393.1|6e-87hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF044C04Sequence596006585 (10)emb|CDP15943.1|2e-81unnamed protein product [Coffea canephora]709009647 (8)gb|KDO63393.1|1e-75hypothetical protein CISIN_1g014927mg [Citrus sinensis]
JMSF048J19Sequence660006585 (10)emb|CDP15943.1|5e-83unnamed protein product [Coffea canephora]776009647 (8)gb|KDO63393.1|6e-91hypothetical protein CISIN_1g014927mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF048J19+ CGGGGCATAGCCTCGGAGCAAGT
rJMSF021D11+ CACGGGGCATAGCCTCGGAGCAAGT
                      ____________________________________________________________
consensus CACGGGGCATAGCCTCGGAGCAAGT
 
. : . : . : . : . : . :
rJMSF048J19+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF031M12+ TTAGCCATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF044C04+ CACCGACATTCCGGTGACG
rJMSF030A20+ GGTGACG
rJMSF021D11+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF020B17+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
                      ____________________________________________________________
consensus TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
 
. : . : . : . : . : . :
rJMSF048J19+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF031M12+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF044C04+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAANCTGTTTGATAAACTGATGACTGAA
rJMSF030A20+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF021D11+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF020B17+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMFF014H17+ TCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
                      ____________________________________________________________
consensus GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
 
. : . : . : . : . : . :
rJMSF048J19+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF031M12+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF044C04+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF030A20+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF021D11+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF020B17+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMFF014H17+ AAGACAAACCTTAAAAACCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMFF011M07+ CACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
                      ____________________________________________________________
consensus AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
 
. : . : . : . : . : . :
rJMSF048J19+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF031M12+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF044C04+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF030A20+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF021D11+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF020B17+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMFF014H17+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMFF011M07+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
                      ____________________________________________________________
consensus GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
 
. : . : . : . : . : . :
rJMSF048J19+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF031M12+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF044C04+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF030A20+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF021D11+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF020B17+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMFF014H17+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMFF011M07+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
                      ____________________________________________________________
consensus ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
 
. : . : . : . : . : . :
rJMSF048J19+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF031M12+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF044C04+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF030A20+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF021D11+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF020B17+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMFF014H17+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMFF011M07+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
                      ____________________________________________________________
consensus GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
 
. : . : . : . : . : . :
rJMSF048J19+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF031M12+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF044C04+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF030A20+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF021D11+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF020B17+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMFF014H17+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMFF011M07+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
                      ____________________________________________________________
consensus GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
 
. : . : . : . : . : . :
rJMSF048J19+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF031M12+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF044C04+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF030A20+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF021D11+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF020B17+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMFF014H17+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMFF011M07+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
                      ____________________________________________________________
consensus TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
 
. : . : . : . : . : . :
rJMSF048J19+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF031M12+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF044C04+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF030A20+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF021D11+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF020B17+ CCTAATGACGAGGACCTACCCGTCCCTGAACACTAAGGCCAGACAATCTTAACAGGTTAA
rJMFF014H17+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMFF011M07+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
                      ____________________________________________________________
consensus CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
 
. : . : . : . : . : . :
rJMSF048J19+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF031M12+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF044C04+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF030A20+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF021D11+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF020B17+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMFF014H17+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMFF011M07+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
                      ____________________________________________________________
consensus GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
 
. : . : . : . : . : . :
rJMSF048J19+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF031M12+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF044C04+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGCCTGACTTTTTTACGT
rJMSF030A20+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF021D11+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF020B17+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMFF014H17+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMFF011M07+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
                      ____________________________________________________________
consensus GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
 
. : . : . : . : . : . :
rJMSF048J19+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF031M12+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF044C04+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF030A20+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF021D11+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF020B17+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMFF014H17+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMFF011M07+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
                      ____________________________________________________________
consensus TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
 
. : . : . : . : . : . :
rJMSF048J19+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF031M12+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF044C04+ TTTATTTGCTGTCTTTTGTATTATAATGGG
rJMSF030A20+ TTTATTTGCTGTCTTTTGTATTATAATGG
rJMSF021D11+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF020B17+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMFF014H17+ TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAAAAAAAA
rJMFF011M07+ TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAATAAAAAATT
                      ____________________________________________________________
consensus TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAATAAAAAATT