clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011M07 | Sequence | 510 | 006585 (10) | emb|CDP15943.1| | 3e-71 | unnamed protein product [Coffea canephora] | 639 | 009647 (8) | gb|KDO63393.1| | 2e-60 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMFF014H17 | Sequence | 583 | 006585 (10) | emb|CDP15943.1| | 2e-80 | unnamed protein product [Coffea canephora] | 709 | 009647 (8) | gb|KDO63393.1| | 4e-69 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF020B17 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 9e-80 | unnamed protein product [Coffea canephora] | 762 | 009647 (8) | gb|KDO63393.1| | 2e-84 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF021D11 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 9e-80 | unnamed protein product [Coffea canephora] | 777 | 009647 (8) | gb|KDO63393.1| | 6e-91 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF030A20 | Sequence | 663 | 006585 (10) | emb|CDP15943.1| | 1e-83 | unnamed protein product [Coffea canephora] | 696 | 009647 (8) | gb|KDO63393.1| | 3e-73 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF031M12 | Sequence | 646 | 006585 (10) | emb|CDP15943.1| | 1e-79 | unnamed protein product [Coffea canephora] | 762 | 009647 (8) | gb|KDO63393.1| | 6e-87 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF044C04 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 2e-81 | unnamed protein product [Coffea canephora] | 709 | 009647 (8) | gb|KDO63393.1| | 1e-75 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF048J19 | Sequence | 660 | 006585 (10) | emb|CDP15943.1| | 5e-83 | unnamed protein product [Coffea canephora] | 776 | 009647 (8) | gb|KDO63393.1| | 6e-91 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF048J19+ CGGGGCATAGCCTCGGAGCAAGT
rJMSF021D11+ CACGGGGCATAGCCTCGGAGCAAGT
____________________________________________________________
consensus CACGGGGCATAGCCTCGGAGCAAGT
. : . : . : . : . : . :
rJMSF048J19+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF031M12+ TTAGCCATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF044C04+ CACCGACATTCCGGTGACG
rJMSF030A20+ GGTGACG
rJMSF021D11+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
rJMSF020B17+ TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
____________________________________________________________
consensus TTAGCAATCCTAGCAGCTTTCGATCTATGCGAAAACGGCGTCACCGACATTCCGGTGACG
. : . : . : . : . : . :
rJMSF048J19+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF031M12+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF044C04+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAANCTGTTTGATAAACTGATGACTGAA
rJMSF030A20+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF021D11+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMSF020B17+ GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
rJMFF014H17+ TCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
____________________________________________________________
consensus GCCATCGTCTTCGGCAGCCCTCAAATCGGCAACAAACTGTTTGATAAACTGATGACTGAA
. : . : . : . : . : . :
rJMSF048J19+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF031M12+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF044C04+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF030A20+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF021D11+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMSF020B17+ AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMFF014H17+ AAGACAAACCTTAAAAACCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
rJMFF011M07+ CACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
____________________________________________________________
consensus AAGACAAACCTTAAAATCCTACACATCCGCAACAAGATCGATATGATCCCGGAGTACCCA
. : . : . : . : . : . :
rJMSF048J19+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF031M12+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF044C04+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF030A20+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF021D11+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMSF020B17+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMFF014H17+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
rJMFF011M07+ GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
____________________________________________________________
consensus GGAGCCCTGTTGGGATACGTGAAGTCAGGGCTGGAATTCGTGATCGACCACCGGAAGTCG
. : . : . : . : . : . :
rJMSF048J19+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF031M12+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF044C04+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF030A20+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF021D11+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMSF020B17+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMFF014H17+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
rJMFF011M07+ ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
____________________________________________________________
consensus ACGAGCCTGAAGAACTCGATGAACCCTAGCGACTGGCATAACTTGCAGGCGATGTTGCAC
. : . : . : . : . : . :
rJMSF048J19+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF031M12+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF044C04+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF030A20+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF021D11+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMSF020B17+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMFF014H17+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
rJMFF011M07+ GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
____________________________________________________________
consensus GTGGTGGCTGGGTGGAATGGGGAAGATGGGGAGTTTGAGTTGAAGGTGAAGAGGTGTGTG
. : . : . : . : . : . :
rJMSF048J19+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF031M12+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF044C04+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF030A20+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF021D11+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMSF020B17+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMFF014H17+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
rJMFF011M07+ GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
____________________________________________________________
consensus GCCCTTGTGAACAAGTCTTGTGAGTTCTTGAAGGAAGAGCTTTTCATTCCGGGGTCATGG
. : . : . : . : . : . :
rJMSF048J19+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF031M12+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF044C04+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF030A20+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF021D11+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMSF020B17+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMFF014H17+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
rJMFF011M07+ TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
____________________________________________________________
consensus TGGATTGAGAAGAATAAAAGTATGGTTCTTGATGAGAATGGAGAGTGGGTTTTGGGATCA
. : . : . : . : . : . :
rJMSF048J19+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF031M12+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF044C04+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF030A20+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF021D11+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMSF020B17+ CCTAATGACGAGGACCTACCCGTCCCTGAACACTAAGGCCAGACAATCTTAACAGGTTAA
rJMFF014H17+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
rJMFF011M07+ CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
____________________________________________________________
consensus CCTAATGACGAGGACCTACCCGTCCCTGAATACTAAGGCCAGACAATCTTAACAGGTTAA
. : . : . : . : . : . :
rJMSF048J19+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF031M12+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF044C04+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF030A20+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF021D11+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMSF020B17+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMFF014H17+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
rJMFF011M07+ GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
____________________________________________________________
consensus GGATCAGTCTCGAAGACAGTTCGGCCAAGCAACCTTAACGGGTTAAGGATCAGTCTCGAA
. : . : . : . : . : . :
rJMSF048J19+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF031M12+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF044C04+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGCCTGACTTTTTTACGT
rJMSF030A20+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF021D11+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMSF020B17+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMFF014H17+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
rJMFF011M07+ GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
____________________________________________________________
consensus GACAGTTCTTATAACTAAGAATCTTGTAATTATTAAGTTAATTGTCTGACTTTTTTACGT
. : . : . : . : . : . :
rJMSF048J19+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF031M12+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF044C04+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF030A20+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF021D11+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMSF020B17+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMFF014H17+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
rJMFF011M07+ TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
____________________________________________________________
consensus TGTCTCTTCATTTATACTTTTAATGTGTGTTCTTTGAGTGTTGTTCTTGAAGTTTGTGTA
. : . : . : . : . : . :
rJMSF048J19+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF031M12+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF044C04+ TTTATTTGCTGTCTTTTGTATTATAATGGG
rJMSF030A20+ TTTATTTGCTGTCTTTTGTATTATAATGG
rJMSF021D11+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMSF020B17+ TTTATTTGCTGTCTTTTGTATTATAATGGGTG
rJMFF014H17+ TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAAAAAAAA
rJMFF011M07+ TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAATAAAAAATT
____________________________________________________________
consensus TTTATTTGCTGTCTTTTGTATTATAATGGGTGTGTAATTGTTGTGTCTCAATAAAAAATT