Contig 009637:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010I22Sequence564011554 (4)gb|KJB42837.1|3e-86hypothetical protein B456_007G169700 [Gossypium raimondii]759009637 (2)gb|KDP30825.1|5e-116hypothetical protein JCGZ_13768 [Jatropha curcas]
JMFN043F07Sequence621009637 (2)gb|KDP30825.1|1e-94hypothetical protein JCGZ_13768 [Jatropha curcas]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF010I22-                               TGTGGAGATGGAGAGAGGGAGAATTACAATTCATCCTTG
                      ____________________________________________________________
consensus                                  TGTGGAGATGGAGAGAGGGAGAATTACAATTCATCCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+                    TCATCTGCCATAAGTTCTTCAAGGGAGAATTCATCCTCTTCGATGATTTCC
rJMFF010I22-          GCTGGTGAGTCATCTGCCATAAGTTCTTCAAGGGAGAATTCATCCTCTTCGATGATTTCC
                      ____________________________________________________________
consensus             GCTGGTGAGTCATCTGCCATAAGTTCTTCAAGGGAGAATTCATCCTCTTCGATGATTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           CCATCGCTACCATCCCAAGGTTCTGTCTTTACAATGTTGGGGGTGCCTGCTAAAGCCAGA
rJMFF010I22-          CCATCGCTACCATCCCAAGGTTCTGTCTTTACAATGTTGGGGGTGCCTGCTAAAGCCAGA
                      ____________________________________________________________
consensus             CCATCGCTACCATCCCAAGGTTCTGTCTTTACAATGTTGGGGGTGCCTGCTAAAGCCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           CTTCCCTTACCTCCTATACTAGCTTCACGCACGAATTCTTTGATCTGATCATGCTGAAAT
rJMFF010I22-          CTTCCCTTACCTCCTATACTAGCTTCACGCACGAATTCTTTGATCTGATCATGCTGAAAT
                      ____________________________________________________________
consensus             CTTCCCTTACCTCCTATACTAGCTTCACGCACGAATTCTTTGATCTGATCATGCTGAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           GCGCTCTTAAGAGGTGCATAAGCTTTGCGGCTCAAGGCCACCAATGCGGGATATCCATAC
rJMFF010I22-          GCGCTCTTAAGAGGTGCATAAGCTTTGCGGCTCAAGGCCACCAATGCGGGATATCCATAC
                      ____________________________________________________________
consensus             GCGCTCTTAAGAGGTGCATAAGCTTTGCGGCTCAAGGCCACCAATGCGGGATATCCATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           CCGCCAACACCAACATGCTTCTCGAGATCTGGTTGCTTACCAGCAGCAGCCCAAACAAAG
rJMFF010I22-          CCGCCAACACCAACATGCTTCTCGAGATCTGGTTGCTTACCAGCAGCAGCCCAAACAAAG
                      ____________________________________________________________
consensus             CCGCCAACACCAACATGCTTCTCGAGATCTGGTTGCTTACCAGCAGCAGCCCAAACAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           CTGTATGGTTTCCCTTTGAACTTCTCTGCAACAGACAACAACAGCTCAAGGTACTTGTTC
rJMFF010I22-          CTGTATGGTTTCCCTTTGAACTTCTCTGCAACAGACAACAACAGCTCAAGGTACTTGTTC
                      ____________________________________________________________
consensus             CTGTATGGTTTCCCTTTGAACTTCTCTGCAACAGACAACAACAGCTCAAGGTACTTGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           CTTCCCTCGGCCTTGGAATCCAAAATGTCAGGGAGGAATGCCACGAAACAAAGGGCAGCG
rJMFF010I22-          CTTCCCTCGGCCTTGGAATCCAAAATGTCAGGGAGGAATGCCACGAAACAAAGGGCAGCG
                      ____________________________________________________________
consensus             CTTCCCTCGGCCTTGGAATCCAAAATGTCAGGGAGGAATGCCACGAAACAAAGGGCAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           GAACCACACTTTTCTTCCATGATTTCTGGTCCAGTCAATTCTGTCACTTCAGGTGGAGAA
rJMFF010I22-          GAACCACACTTTTCTTCCATGATTTCTGGTCCAGTCAATTCTGTCACTTCAGGTGGAGAA
                      ____________________________________________________________
consensus             GAACCACACTTTTCTTCCATGATTTCTGGTCCAGTCAATTCTGTCACTTCAGGTGGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           ACATTAGTTTCCAGCTGATCTAGAGCAAATGATTCAATTGCTGAGGCAGTCCTTGCACCA
rJMFF010I22-          ACATTAGTTTCCAGCTGATCTAGAGCAAATGATTCAATTGCTGAGGCAGTCCTTGCACCA
                      ____________________________________________________________
consensus             ACATTAGTTTCCAGCTGATCTAGAGCAAATGATTCAATTGCTGAGGCAGTCCTTGCACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN043F07+           TCATAAGAGGAAGGCTTGTCCTTGTCAGCCCCAAATACCAAAATTGTAGG          
rJMFF010I22-          TCATAAGAGGAAGGCTTGTCCTTGTCAGCCCCAAATACCAAAATTGTAGGAAATCCTTGA
                      ____________________________________________________________
consensus             TCATAAGAGGAAGGCTTGTCCTTGTCAGCCCCAAATACCAAAATTGTAGGAAATCCTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF010I22-          ACATTGAACCTGCTCATCAGAGACTGCTCTGCATCACAGTCTACATGACCCAACTTCACC
                      ____________________________________________________________
consensus             ACATTGAACCTGCTCATCAGAGACTGCTCTGCATCACAGTCTACATGACCCAACTTCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF010I22-          TTTCCTTTGAGCTTATTCGCAGCTTTTTTCCACTCCGGAGCAAGCTTCTTGCAGTGTCCA
                      ____________________________________________________________
consensus             TTTCCTTTGAGCTTATTCGCAGCTTTTTTCCACTCCGGAGCAAGCTTCTTGCAGTGTCCA