Contig 009635:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H06Sequence492003100 (2)ref|XP_009589535.1|4e-51PREDICTED: centlein-like [Nicotiana tomentosiformis]763009635 (2)ref|XP_010320190.1|3e-57PREDICTED: uncharacterized protein LOC101266817 isoform X1 [Solanum lycopersicu
JMFF035A19Sequence532003100 (2)ref|XP_009589535.1|8e-61PREDICTED: centlein-like [Nicotiana tomentosiformis]759009635 (2)ref|XP_010320190.1|2e-56PREDICTED: uncharacterized protein LOC101266817 isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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rJMFF035A19+                         GNCCGAGATACGCGTGCGCGAGTTAGAGGAGGAGGTGCAGAAAAT
rJMFF010H06+                           CCGAGATACGCGTGCGCGAGTTAGAGGAGGAGGTGCAGAAAAT
                      ____________________________________________________________
consensus                            GNCCGAGATACGCGTGCGCGAGTTAGAGGAGGAGGTGCAGAAAAT
 
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rJMFF035A19+          GGAGGAGGAATTTCGGTTCTACAAGTACGAGGCCCAACAGGTTGATACATCTGGAGAGGA
rJMFF010H06+          GGAGGAGGAATTTCGGTTCTACAAGTACGAGGCCCAACAGGTTGATACATCTGGAGAGGA
                      ____________________________________________________________
consensus             GGAGGAGGAATTTCGGTTCTACAAGTACGAGGCCCAACAGGTTGATACATCTGGAGAGGA
 
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rJMFF035A19+          TGCATCTACAGGACAAGTTTTGCTAGAGTCTTTGTTGGCAAGCATAATGAGCAAAGATGA
rJMFF010H06+          TGCATCTACAGGACAAGTTTTGCTAGAGTCTTTGTTGGCAAGCATAATGAGCAAAGATGA
                      ____________________________________________________________
consensus             TGCATCTACAGGACAAGTTTTGCTAGAGTCTTTGTTGGCAAGCATAATGAGCAAAGATGA
 
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rJMFF035A19+          ACTTCAATCAAAAGCACATGGTTTTCTAGAGGCAAATAGCAATGTCGAAGTTTGCCAAGT
rJMFF010H06+          ACTTCAATCAAAAGCACATGGTTTTCTAGAGGCAAATAGCAATGTCGAAGTTTGCCAAGT
                      ____________________________________________________________
consensus             ACTTCAATCAAAAGCACATGGTTTTCTAGAGGCAAATAGCAATGTCGAAGTTTGCCAAGT
 
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rJMFF035A19+          ATTGCTAAAGATGTGGAATAGATAGAGACCATCGGAACACAAGTTTCTTGCATTGGCAGC
rJMFF010H06+          ATTGCTAAAGATGTGGAATAGATAGAGACCATCGGAACACAAGTTTCTTGCATTGGCAGC
                      ____________________________________________________________
consensus             ATTGCTAAAGATGTGGAATAGATAGAGACCATCGGAACACAAGTTTCTTGCATTGGCAGC
 
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rJMFF035A19+          TGAAGTAAAAACATTGCAGAAAGATAAGGAACACTTATTGATTAACCTTCACAGAGCTGA
rJMFF010H06+          TGAAGTAAAAACATTGCAGAAAGATAAGGAACACTTATTGATTAACCTTCACAGAGCTGA
                      ____________________________________________________________
consensus             TGAAGTAAAAACATTGCAGAAAGATAAGGAACACTTATTGATTAACCTTCACAGAGCTGA
 
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rJMFF035A19+          AGAGGAGGTGAAAGTATTGTTTGAAGAAAACAATATGTTGGATGAGGAGAACAAGAGGAT
rJMFF010H06+          AGAGGAGGTGAAAGTATTGTTTGAAGAAAACAATATGTTGGATGAGGAGAACAAGAGGAT
                      ____________________________________________________________
consensus             AGAGGAGGTGAAAGTATTGTTTGAAGAAAACAATATGTTGGATGAGGAGAACAAGAGGAT
 
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rJMFF035A19+          ATTGGAGCTATATCACAGAGATAAGCATAGTTCTAGTTCTGGCGGAAAGAACTCAGGCTG
rJMFF010H06+          ATTGGAGCTATATCACAGAGATAAGCATAGTTCTAGTTCTGGCGGAAAGAACTCAGGCTG
                      ____________________________________________________________
consensus             ATTGGAGCTATATCACAGAGATAAGCATAGTTCTAGTTCTGGCGGAAAGAACTCAGGCTG
 
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rJMFF035A19+          TACTTCCACAAAGGGAAACAAAAGAAAATTGTGTTCCAAGACCAACAGCTCCTCCATTGA
rJMFF010H06+          TACTTCCACAAAGGGAAACAAAAGAAAATTGTGTTCCAAGACCAACAGCTCCTCCATTGA
                      ____________________________________________________________
consensus             TACTTCCACAAAGGGAAACAAAAGAAAATTGTGTTCCAAGACCAACAGCTCCTCCATTGA
 
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rJMFF035A19+          GAGAAAGATTGACTTCAGTAATGTTGATTCGTCGAGGCTGCCATTATCACCGCTAAGGGA
rJMFF010H06+          GAGAAAGATTGACTTCAGTAATGTTGATTCGTCGAGGCTGCCATTATCACCGCTAAGGGA
                      ____________________________________________________________
consensus             GAGAAAGATTGACTTCAGTAATGTTGATTCGTCGAGGCTGCCATTATCACCGCTAAGGGA
 
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rJMFF035A19+          GAATTCACCCGAATGTAGAGCTTACAAGAAGTAGCAGGATTTTGGTGAACATCATGTTCA
rJMFF010H06+          GAATTCACCCGAATGTAGAGCTTACAAGAAGTAGCAGGATTTTGGTGAACATCATGTTCA
                      ____________________________________________________________
consensus             GAATTCACCCGAATGTAGAGCTTACAAGAAGTAGCAGGATTTTGGTGAACATCATGTTCA
 
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rJMFF035A19+          ACCATTTTGCTAATCTTTGTGTATCCAGATTATGTTCCTGTTCATCATAACTGTAAGTAA
rJMFF010H06+          ACCATTTTGCTAATCTTTGTGTATCCAGATTATGTTCCTGTTCATCATAACTGTAAGTAA
                      ____________________________________________________________
consensus             ACCATTTTGCTAATCTTTGTGTATCCAGATTATGTTCCTGTTCATCATAACTGTAAGTAA
 
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rJMFF035A19+          CTGATAGTCTGATACTAGTTTCAGAACTCATTTAAGCTGTCAGGTTCACTCATT      
rJMFF010H06+          CTGATAGTCTGATACTAGTTTCAGAACTCATTTAAGCTGTCAGGTTCACTCATTGATTTA
                      ____________________________________________________________
consensus             CTGATAGTCTGATACTAGTTTCAGAACTCATTTAAGCTGTCAGGTTCACTCATTGATTTA