| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015H03 | Sequence | 610 | 009631 (17) | emb|CDP04424.1| | 1e-110 | unnamed protein product [Coffea canephora] | |||||
| JMFF003I13 | Sequence | 612 | 005910 (2) | ref|XP_009776125.1| | 5e-54 | PREDICTED: aspartic proteinase-like [Nicotiana sylvestris] | 778 | 009631 (17) | ref|XP_009629448.1| | 5e-120 | PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis] |
| JMFF007O19 | Sequence | 545 | 009631 (17) | emb|CDP04424.1| | 1e-64 | unnamed protein product [Coffea canephora] | 714 | 009631 (17) | ref|XP_009792514.1| | 6e-106 | PREDICTED: aspartic proteinase-like, partial [Nicotiana sylvestris] |
| JMFF009C19 | Sequence | 682 | 009631 (17) | ref|XP_009792514.1| | 6e-101 | PREDICTED: aspartic proteinase-like, partial [Nicotiana sylvestris] | |||||
| JMFF009E15 | Sequence | 543 | 005910 (2) | ref|XP_006348142.1| | 1e-05 | PREDICTED: aspartic proteinase-like [Solanum tuberosum] | 694 | 009631 (17) | ref|XP_009792514.1| | 3e-104 | PREDICTED: aspartic proteinase-like, partial [Nicotiana sylvestris] |
| JMFF009L17 | Sequence | 549 | 009631 (17) | emb|CDP04424.1| | 1e-74 | unnamed protein product [Coffea canephora] | 794 | 009631 (17) | ref|XP_009792514.1| | 6e-103 | PREDICTED: aspartic proteinase-like, partial [Nicotiana sylvestris] |
| JMFF013G18 | Sequence | 492 | 009631 (17) | ref|XP_009776125.1| | 8e-65 | PREDICTED: aspartic proteinase-like [Nicotiana sylvestris] | 759 | 009631 (17) | ref|XP_009629448.1| | 4e-123 | PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis] |
| JMFF022F10 | Sequence | 543 | 009631 (17) | emb|CDP04424.1| | 9e-73 | unnamed protein product [Coffea canephora] | 761 | 009631 (17) | ref|XP_009629448.1| | 6e-113 | PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis] |
| JMFF024D02 | Sequence | 474 | 009631 (17) | ref|XP_009776125.1| | 9e-65 | PREDICTED: aspartic proteinase-like [Nicotiana sylvestris] | 731 | 009631 (17) | ref|XP_009629448.1| | 2e-114 | PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis] |
| JMFF030G18 | Sequence | 482 | 009631 (17) | ref|XP_009776125.1| | 1e-64 | PREDICTED: aspartic proteinase-like [Nicotiana sylvestris] | 666 | 009631 (17) | ref|XP_009629448.1| | 7e-99 | PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis] |
| JMFN014H02 | Sequence | 390 | 009631 (17) | dbj|BAC16370.1| | 2e-39 | aspartic proteinase 4 [Glycine max] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF013G18- ATATTCTCTAAAAATTCCCTATCCACCCTT
JMFF007O19- CTCTAAAAATTCCCTATCCACCCTT
JMFF022F10- CTCTAAAAATTCCCTATCCACCCTT
JMFF030G18- CTCTAAAAATTCCCTATCCACCCTT
JMFF024D02- CTATCCACCCTT
JMFF009L17- CTCTAAAAATTCCCTATCCACCCTT
____________________________________________________________
consensus ATATTCTCTAAAAATTCCCTATCCACCCTT
. : . : . : . : . : . :
JMFF013G18- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAGAATGGGAGTGAAAGCTTTGGTGGT
JMFF007O19- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
JMFF022F10- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
JMFF030G18- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
JMFF024D02- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
JMFF009L17- GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
____________________________________________________________
consensus GATCTCTTGCAGAGTCTTGCTTGTCTAATTGGTCAAAATGGGAGTGAAAGCTTTGGTGGT
. : . : . : . : . : . :
JMFF013G18- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
JMFF007O19- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
JMFF022F10- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
JMFF030G18- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
JMFF024D02- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
JMFF009L17- CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
____________________________________________________________
consensus CACTCTGTTTCTTTCATCCCTTGTGTTTCCGCTGGCATTCTCCAAATCAAATGATGGGTT
. : . : . : . : . : . :
JMFF013G18- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
JMFF007O19- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
JMFF022F10- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
JMFF030G18- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
JMFF024D02- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
JMFF009L17- TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
____________________________________________________________
consensus TGTGAGAATTGGGTTGAAGAAGATGAAAATTGATAAGAACAACCGAATTGCTGCGCGGCT
. : . : . : . : . : . :
JMFF013G18- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
JMFF007O19- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
JMFF022F10- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
JMFF030G18- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
JMFF024D02- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
JMFF009L17- TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
____________________________________________________________
consensus TGAAGCCAAGGCGGGAGACTCACTTAGGGCGTCTGTAAGAAAGTATTATAACCTCCATGG
. : . : . : . : . : . :
JMFF013G18- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
JMFF007O19- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
JMFF022F10- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
JMFF030G18- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
JMFF024D02- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
JMFF009L17- TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
____________________________________________________________
consensus TAGAAATGGGGATTTACAGGATACTGATATTGTTGGGCTAAAGAATTACATGGATGCTCA
. : . : . : . : . : . :
JMFF013G18- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
JMFF007O19- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
JMFF022F10- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
JMFF030G18- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
JMFF024D02- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
JMFF009L17- ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
____________________________________________________________
consensus ATACTTTGGGGAGATTGGTGTTGGAACTCCTCCCCAGAAGTTTACTGTTATCTTTGACAC
. : . : . : . : . : . :
JMFF013G18- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
JMFF007O19- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
JMFF022F10- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
JMFF030G18- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
JMFF024D02- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
JMFF009L17- TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
____________________________________________________________
consensus TGGAAGCTCTAACTTATGGGTGCCTTCATCAAAGTGCTATTTCTCGGTTCCGTGTTTTTT
. : . : . : . : . : . :
JMFF013G18- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACGAGAA
JMFF007O19- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACNAGAANAATGGGAAGTCTGCTGA
JMFF022F10- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACGGGAAGAATGGGAAGTCTGCTGA
JMFF030G18- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTAC
JMFF024D02- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACGAGAA
JMFF009L17- CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACGAGAAGAATGGGAAGTCTGCTGA
rJMCP015H03- ACTTACGAGAAGAATGGGAAGTCTGCTGA
____________________________________________________________
consensus CCATTCCAAGTACACCTCTAGCCAATCCAGTACTTACGAGAAGAATGGGAAGTCTGCTGA
. : . : . : . : . : . :
JMFF007O19- AATTCATTACGGGACTGGATCAATATCTGGTTTCT
JMFF022F10- AATTCATTACGGGACTGGATCAATATCTGGNTTCT
JMFF009L17- AATTCATTACGGGACTGGATCAATATCTGGTTTCT
rJMCP015H03- AATTCATTACGGGACTGGATCAATATCTGGTTTCTTCAGCCAAGATAGCGTTCAAGTTGG
____________________________________________________________
consensus AATTCATTACGGGACTGGATCAATATCTGGTTTCTTCAGCCAAGATAGCGTTCAAGTTGG
. : . : . : . : . : . :
rJMCP015H03- TGATCTTGTTGTAAAAAGTCAGGCATTTATCGAGGCAACAAGTGAGCCGGGTGTGACTTT
____________________________________________________________
consensus TGATCTTGTTGTAAAAAGTCAGGCATTTATCGAGGCAACAAGTGAGCCGGGTGTGACTTT
. : . : . : . : . : . :
rJMCP015H03- TTTGGTTGCCAAGTTTGATGGCATATTGGGTCTTGGATTCCAGGAGATCTCGGTTGGAGA
____________________________________________________________
consensus TTTGGTTGCCAAGTTTGATGGCATATTGGGTCTTGGATTCCAGGAGATCTCGGTTGGAGA
. : . : . : . : . : . :
rJMCP015H03- TGCXXXXXXXXXXXXXXXXXXCATGGTAAACCAAGGTTTAGTTCAGGACCCTATCTTCTC
____________________________________________________________
consensus TGCNNNNNNNNNNNNNNNNNNCATGGTAAACCAAGGTTTAGTTCAGGACCCTATCTTCTC
. : . : . : . : . : . :
rJMCP015H03- ATTTTGGCTTAACCGAAACCCACAAGAGCAAGAAGGGGGAGAACTTGTGTTCGGTGGGGT
____________________________________________________________
consensus ATTTTGGCTTAACCGAAACCCACAAGAGCAAGAAGGGGGAGAACTTGTGTTCGGTGGGGT
. : . : . : . : . : . :
rJMCP015H03- TGACCCGAAACACTACAAAGGGGAACACACCTATGTTCCAGTGACACAGAAAGGTTATTG
____________________________________________________________
consensus TGACCCGAAACACTACAAAGGGGAACACACCTATGTTCCAGTGACACAGAAAGGTTATTG
. : . : . : . : . : . :
rJMCP015H03- GCAGTTTGATATGGGTGAAGTCCTAATTGAGGGTAAACCAACTGGGTTCTGCAGTGGTGG
____________________________________________________________
consensus GCAGTTTGATATGGGTGAAGTCCTAATTGAGGGTAAACCAACTGGGTTCTGCAGTGGTGG
. : . : . : . : . : . :
rJMCP015H03- ATGTTCTGCAATCGCAGATTCTGGAACTTCTCTGATAGCTGGTCCATCGAGTATTATTAC
rJMFF013G18+ CTGGTCCATCGAGTATTATTAC
____________________________________________________________
consensus ATGTTCTGCAATCGCAGATTCTGGAACTTCTCTGATAGCTGGTCCATCGAGTATTATTAC
. : . : . : . : . : . :
rJMCP015H03- CATGATCAATCACGCCATTGGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
rJMFF013G18+ CATGATCAATCACGCCATTGGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
rJMFF022F10+ ATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
rJMFF024D02+ GGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
rJMFF009L17+ CATGATCAATCACGCCATTGGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAGCCCGTGG
rJMFF003I13+ CATGATCAATCACGCCATTGGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
____________________________________________________________
consensus CATGATCAATCACGCCATTGGAGCTGATGGAGTAGTTAGCAAGGAATGCAAAG-CCGTGG
. : . : . : . : . : . :
rJMCP015H03- TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGG
rJMFF013G18+ TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGTCACGTCCAAAGAAGA
rJMFF022F10+ TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
rJMFF024D02+ TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
rJMFF009L17+ TTGAAAACTATGGAC--AGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
rJMFF003I13+ TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
rJMFF009E15+ ACAAAGAATGATTGATTTGCTNGTAATGGAGGCACGTCCAAAGAAGA
rJMFF030G18+ CCAAAGAAGA
rJMFF007O19+ AACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
rJMFF009C19+ ATGGAGGCACGTCCAAAGAAGA
____________________________________________________________
consensus TTGAAAACTATGGACAAAGAATGATTGATTTGCTTGTAATGGAGGCACGTCCAAAGAAGA
. : . : . : . : . : . :
rJMFF013G18+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF022F10+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF024D02+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF009L17+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF003I13+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF009E15+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF030G18+ TATGCTCGCAAATTGGGTTATGCACNTTCAATGGAANCCGTGGTGTTAGCATGGGAATCG
rJMFF007O19+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
rJMFF009C19+ TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
____________________________________________________________
consensus TATGCTCGCAAATTGGGTTATGCACCTTCAATGGAAACCGTGGTGTTAGCATGGGAATCG
. : . : . : . : . : . :
rJMFF013G18+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF022F10+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF024D02+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF009L17+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF003I13+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF009E15+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF030G18+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF007O19+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
rJMFF009C19+ AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
____________________________________________________________
consensus AGAGCGTTGTAGATGAGAAAAATGGGGTATCAGCCGATCTACATGATGCTATGTGCTCGG
. : . : . : . : . : . :
rJMFF013G18+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF022F10+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF024D02+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF009L17+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF003I13+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF009E15+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF030G18+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF007O19+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
rJMFF009C19+ CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
____________________________________________________________
consensus CTTGTGAAATGACGGTTGTTTGGATGCAGAATCAACTTAGCGAGAATCAGACTCAAGAAA
. : . : . : . : . : . :
rJMFF013G18+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF022F10+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF024D02+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF009L17+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF003I13+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF009E15+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF030G18+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF007O19+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
rJMFF009C19+ ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
____________________________________________________________
consensus ACATTTTGTCTTATGTGAATGAGCTTTGCAACCGGCTACCGAGCCCCATGGGAGAATCAG
. : . : . : . : . : . :
rJMFF013G18+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF022F10+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF024D02+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF009L17+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF003I13+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF009E15+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
JMFN014H02- CTTCTCAATTGGTGGAAAAG
rJMFF030G18+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF007O19+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
rJMFF009C19+ GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
____________________________________________________________
consensus GCGTCGACTGTGGAAAGCTTTCCACCATGCCTTCTGTTTCCTTCTCAATTGGTGGAAAAG
. : . : . : . : . : . :
rJMFF013G18+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF022F10+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF024D02+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF009L17+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF003I13+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF009E15+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
JMFN014H02- TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF030G18+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF007O19+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
rJMFF009C19+ TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
____________________________________________________________
consensus TGTTCGACCTCTCCCCTAATGAGTACATACTGAAGGTGGGCGAGGGAAGCGCAGCACAGT
. : . : . : . : . : . :
rJMFF013G18+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF022F10+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF024D02+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF009L17+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF003I13+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF009E15+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
JMFN014H02- GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF030G18+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF007O19+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
rJMFF009C19+ GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
____________________________________________________________
consensus GCATTAGTGGCTTCACGGCTTTGGATGTCCCTCCTCCTCGCGGACCTCTCTGGATATTGG
. : . : . : . : . : . :
rJMFF013G18+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF022F10+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF024D02+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF009L17+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF003I13+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF009E15+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
JMFN014H02- GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF030G18+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF007O19+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
rJMFF009C19+ GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
____________________________________________________________
consensus GAGATGTTTTCATGGGCAGATACCACACTGTGTTTGATTATGGCAAGATGAGGGTTGGAT
. : . : . : . : . : . :
rJMFF013G18+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
rJMFF022F10+ TTGCTGAAGCAG
rJMFF024D02+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
rJMFF009L17+ TTGCTGAAGCAG
rJMFF003I13+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
rJMFF009E15+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
JMFN014H02- TTGCTGAAGCAG
rJMFF030G18+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
rJMFF007O19+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
rJMFF009C19+ TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
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consensus TTGCTGAAGCAGCTTAATGCCCCCTATTATCCCTTTATTCATTTTCTTGCTGCCATTATC
. : . : . : . : . : . :
rJMFF013G18+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
rJMFF024D02+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTTCTTGCGAATCTGGGCATATAT
rJMFF003I13+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
rJMFF009E15+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
rJMFF030G18+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
rJMFF007O19+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
rJMFF009C19+ TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
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consensus TAATATGTATGAGTGGTTTAATTTAAGTAGATAGATGTACTTGCGAATCTGGGCATATAT
. : . : . : . : . : . :
rJMFF013G18+ AGACGTACATT
rJMFF024D02+ AGACGTACATTTGTAAACTATGATTATACTA
rJMFF003I13+ AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGTCCTATAAAA
rJMFF009E15+ AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGT
rJMFF030G18+ AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGTCCTATAAAA
rJMFF007O19+ AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGTCCTATAAAATAC
rJMFF009C19+ AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGTCCTATAAAATACT
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consensus AGACGTACATTTGTAAACTATGATTATACTATGGTGTTTGGTTTGGTCCTATAAAATACT