Contig 009625:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007O17Sequence578018404ref|XP_011100417.1|84.3PREDICTED: uncharacterized protein LOC105178604 [Sesamum indicum]746009625 (3)ref|XP_006379953.1|2e-07hypothetical protein POPTR_0008s18360g [Populus trichocarpa] gb|ERP57750.1| hypo
JMSF001A18Sequence221009150 (3)748009625 (3)gb|KDP45229.1|1e-10hypothetical protein JCGZ_15094 [Jatropha curcas]
JMSF017D03Sequence307009150 (3)749009625 (3)ref|XP_006379953.1|5e-09hypothetical protein POPTR_0008s18360g [Populus trichocarpa] gb|ERP57750.1| hypo

Alignment

This contig is upended


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rJMSF001A18+              ATGGGCAAGGATTGAGGCAATATTTGTTTCTCGTTCCAAACAAGCAAATGAACAAA
rJMSF017D03+                GGGCAAGGATTGAGGCAATATTTG-TTCTCGTTCCAAACAAGCAAATGAACAAA
rJMFF007O17+                                            TCGTTCCAAACAAGCAAATGAACAAA
                      ____________________________________________________________
consensus                 ATGGGCAAGGATTGAGGCAATATTTGTTTCTCGTTCCAAACAAGCAAATGAACAAA
 
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rJMSF001A18+          GTCATGATCCAATCAAAGAGGGAGCCCTGACAATGTGTAGCTTCCACTGGAGTCGTCGTG
rJMSF017D03+          GTCATGATCCAATCAAAGAGGGAGCCCTGACAATGTGTAGCTTCCACGGGAGTCGTCGTG
rJMFF007O17+          GTCATGATCCAATCAAAGAGGGAGCCCTGACAATGTGTAGCTTCCACTGGAGTCGTCGTG
                      ____________________________________________________________
consensus             GTCATGATCCAATCAAAGAGGGAGCCCTGACAATGTGTAGCTTCCACTGGAGTCGTCGTG
 
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rJMSF001A18+          GCTGGGCAATCATCAGCAAATGCTCCAGTAATTTAATGGCCAAAGCGTTGGGCAACGTTA
rJMSF017D03+          GCTGGGCAATCATCAGCAAATGCTCCAGTAATTTAATGGCCAAAGCGTTGGGCAACGTTA
rJMFF007O17+          GCTGGGCAATCATCAGCAAATGCTCCAGTAATTTAATGGCCAAAGCGTTGGGCAACGTTA
                      ____________________________________________________________
consensus             GCTGGGCAATCATCAGCAAATGCTCCAGTAATTTAATGGCCAAAGCGTTGGGCAACGTTA
 
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rJMSF001A18+          TGCTCAACTGCTTGAATAAGTGCAAACCTGAAGAGTGGAAAAAGAATGGCCTTGTGGAGT
rJMSF017D03+          TGCTCAACTGCTTGAATAAGTGCAAACCTGAAGAGTGGAAAAAGAATGGCCTTGTGGAGT
rJMFF007O17+          TGCTCAACTGCTTGAATAAGTGCAAACCTGAAGAGTGGAAAAAGAATGGCCTTGTGGAGT
                      ____________________________________________________________
consensus             TGCTCAACTGCTTGAATAAGTGCAAACCTGAAGAGTGGAAAAAGAATGGCCTTGTGGAGT
 
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rJMSF001A18+          CTTTGAATGCTTGTATATCAAAGAGTTGTGAGACCTTACATTTCCTGCCAACATTTCCAG
rJMSF017D03+          CTTTGAATGCTTGTATATCAAAGAGTTGTGAGACCTTACATTTCCTGCCAACATTTCCAG
rJMFF007O17+          CTTTGAATGCTTGTATATCAAAGAGTTGTGAGACCTTACATTTCCTGCCAACATTTCCAG
                      ____________________________________________________________
consensus             CTTTGAATGCTTGTATATCAAAGAGTTGTGAGACCTTACATTTCCTGCCAACATTTCCAG
 
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rJMSF001A18+          AGATACCCAAAATGAGAGTTTGCTCCCAAAGTTCCTGTGGTCGTCCAATGAGGAAATCCG
rJMSF017D03+          AGATACCCAAAATGAGAGTTTGCTCCCAAAGTTCCTGTGGTCGTCCAATGAGGAAATCCG
rJMFF007O17+          AGATACCCAAAATGAGAGTTTGCTCCCAAAGTTCCTGTGGTCGTCCAATGAGGAAATCCG
                      ____________________________________________________________
consensus             AGATACCCAAAATGAGAGTTTGCTCCCAAAGTTCCTGTGGTCGTCCAATGAGGAAATCCG
 
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rJMSF001A18+          TCACCTTCCATTGCTTGGGTTATAACAAAACACAGAGTACTAATCCAACGGCAGAGAGCT
rJMSF017D03+          TCACCTTCCATTGCTTGGGTTATAACAAAACACAGAGTACTAATCCAACGGCAGAGAGCT
rJMFF007O17+          TCACCTTCCATTGCTTGGGTTATAACAAAACACAGAGTACTAATCCAACGGCAGAGAGCT
                      ____________________________________________________________
consensus             TCACCTTCCATTGCTTGGGTTATAACAAAACACAGAGTACTAATCCAACGGCAGAGAGCT
 
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rJMSF001A18+          GAGGTGGTCCACTGATCCATAAAAGGGGAGGGGTGATTCTTCAGGTACCATTAACCCCAA
rJMSF017D03+          GAGGTGGTCCACTGATCCATAAAAGGGGAGGGGTGATTCTTCAGGTACCATTAACCCCAA
rJMFF007O17+          GAGGTGGTCCACTGATCCATAAAAGGGGAGGGGTGATTCTTCAGGTACCATTAACCCCAA
                      ____________________________________________________________
consensus             GAGGTGGTCCACTGATCCATAAAAGGGGAGGGGTGATTCTTCAGGTACCATTAACCCCAA
 
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rJMSF001A18+          ATTTCCACCCTTCAATTCTCTTGTAGAATCTCAATCTTGAATGCCCCTGTTTGTAATCTG
rJMSF017D03+          ATTTCCACCCTTCAATTCTCTTGTAGAATCTCAATCTTGAATGCCCCTGTTTGTAATCTG
rJMFF007O17+          ATTTCCACCCTTCAATTCTCTTGTAGAATCTCAATCTTGAATGCCCCTGTTTGTAATCTG
                      ____________________________________________________________
consensus             ATTTCCACCCTTCAATTCTCTTGTAGAATCTCAATCTTGAATGCCCCTGTTTGTAATCTG
 
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rJMSF001A18+          AGACTCCCAAATCTTCAACACTATTTCTTCATTTGTTTTATAATTAGTGTGTGAATTTCC
rJMSF017D03+          AGACTCCCAAATCTTCAACACTATTTCTTCATTTGTTTTATAATTAGTGTGTGAATTTCC
rJMFF007O17+          AGACTCCCAAATCTTCAACACTATTTCTTCATTTGTTTTATAATTAGTGTGTGAATTTCC
                      ____________________________________________________________
consensus             AGACTCCCAAATCTTCAACACTATTTCTTCATTTGTTTTATAATTAGTGTGTGAATTTCC
 
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rJMSF001A18+          TCCAGTGGTGTTTTGTTTTGGATGCCACATGATTATCATAACTTATGTGTATTTATTTCT
rJMSF017D03+          TCCAGTGGTGTTTTGTTTTGGATGCCACATGATTATCATAACTTATGTGTATTTATTTCT
rJMFF007O17+          TCCAGTGGTGTTTTGTTTTGGATGCCACATGATTATCATAACTTATGTGTATTTATTTCT
                      ____________________________________________________________
consensus             TCCAGTGGTGTTTTGTTTTGGATGCCACATGATTATCATAACTTATGTGTATTTATTTCT
 
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rJMSF001A18+          CAATTTCATATGATGATATTCCTCATCATAAACACCATATGTATAAATAGTGTTTTGGTG
rJMSF017D03+          CAATTTCATATGATGATATTCCTCATCATAAACACCATATGTATAAATAGTGTTTTGGTG
rJMFF007O17+          CAATTTCATATGATGATATTCCTCATCATAAACACCATATGTATAAATAGTGTTTTGGTG
                      ____________________________________________________________
consensus             CAATTTCATATGATGATATTCCTCATCATAAACACCATATGTATAAATAGTGTTTTGGTG
 
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rJMSF001A18+          ATGGAGCATGCCATCTGTTACTATAAGTTGTG                            
rJMSF017D03+          ATGGAGCATGCCATCTGTTACTATAAGTTGTG                            
rJMFF007O17+          ATGGAGCATGCCATCTGTTACTATAAGTTGTGGTTTTTGAACTTGCTGGGATTCAATAAT
                      ____________________________________________________________
consensus             ATGGAGCATGCCATCTGTTACTATAAGTTGTGGTTTTTGAACTTGCTGGGATTCAATAAT