| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007M17 | Sequence | 639 | 010713 (3) | ref|XP_006349748.1| | 8e-86 | PREDICTED: glutathione reductase, chloroplastic-like [Solanum tuberosum] | 804 | 009624 (4) | emb|CAA53993.1| | 1e-36 | glutathione reductase [Nicotiana tabacum] |
| JMFF010D09 | Sequence | 351 | 009624 (4) | emb|CAA53993.1| | 1e-16 | glutathione reductase [Nicotiana tabacum] | |||||
| JMSF003A10 | Sequence | 236 | 010713 (3) | 773 | 009624 (4) | emb|CAA53993.1| | 7e-72 | glutathione reductase [Nicotiana tabacum] | |||
| JMSF024E21 | Sequence | 647 | 010713 (3) | ref|XP_006349748.1| | 1e-86 | PREDICTED: glutathione reductase, chloroplastic-like [Solanum tuberosum] | 727 | 009624 (4) | emb|CAA53993.1| | 9e-53 | glutathione reductase [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF003A10+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
rJMSF003A10+ GCAGTATTTTCTCAACCCCCTATCGGGCAAGTTGGTCTGACTGAAGAACAGGCCATAAAT
rJMSF024E21+ CAGGCCATAAAT
____________________________________________________________
consensus GCAGTATTTTCTCAACCCCCTATCGGGCAAGTTGGTCTGACTGAAGAACAGGCCATAAAT
. : . : . : . : . : . :
rJMSF003A10+ GCATATGGTGATGTAGACATTTTCACATC-AAACTTTAGGCCCTTAAAGGCTACACTCTC
rJMSF024E21+ GCATATGGTGATGTAGACATTTTCACATCNAAACTTTAGGCCCTTAAAGGCTACACTCTC
____________________________________________________________
consensus GCATATGGTGATGTAGACATTTTCACATCNAAACTTTAGGCCCTTAAAGGCTACACTCTC
. : . : . : . : . : . :
rJMSF003A10+ TGGCCTTACAGATAGAGTTTTCATGAAACTTATTGTCTGTGCAAAGACAAACAAAGTTCT
rJMSF024E21+ TGGCCTTACAGATAGAGTTTTCATGAAACTTATTGTCTGTGCAAAGACAAACAAAGTTCT
rJMFF007M17+ CTGTGCAAAGACAAACAAAGTTTT
____________________________________________________________
consensus TGGCCTTACAGATAGAGTTTTCATGAAACTTATTGTCTGTGCAAAGACAAACAAAGTTCT
. : . : . : . : . : . :
rJMSF003A10+ AGGCTTGCACATCTGTGGAGAAGATGCACCGGAAATGACACAGGGGTTTGCAGTTGCTGT
rJMSF024E21+ AGGCTTGCACATCTGTGGAGAAGATGCACCGGAAATGACACAGGGGTTTGCAGTTGCTGT
rJMFF007M17+ AGGCTTGCACATCTGTGGAGAAGATGCACCGGAAATGACACAGGGGTTTGCAGTTGCTGT
____________________________________________________________
consensus AGGCTTGCACATCTGTGGAGAAGATGCACCGGAAATGACACAGGGGTTTGCAGTTGCTGT
. : . : . : . : . : . :
rJMFF010D09+ GCTTAACAAAAGCAGATTTTGATGCCACAGTTGGTATCCACCCAACAGCAGC
rJMSF003A10+ GAAAGCTGGCTTAACAAAAGCAGATTTTGATGCCACAGTTGGTATCCACCCAACAGCAGC
rJMSF024E21+ GAAAGCTGGCTTAACAAAAGCAGATTTTGATGCCACAGTTGGTATCCACCCAACAGCAGC
rJMFF007M17+ GAAAGCTGGCTTAACAAAAGCAGATTTTGATGCCACAGTTGGTATCCACCCAACAGCAGC
____________________________________________________________
consensus GAAAGCTGGCTTAACAAAAGCAGATTTTGATGCCACAGTTGGTATCCACCCAACAGCAGC
. : . : . : . : . : . :
rJMFF010D09+ AGAGGAGTTTGTCACCATGAGGACACCTACAAGAAAGATTCGGAGCAATCCATNTGAGGG
rJMSF003A10+ AGAGGAGTTTGTCACCATGAGGACACCTACAAGAAAGATTCGGAGCAATCCATCTGAGGG
rJMSF024E21+ AGAGGAGTTTGTCACCATGAGGACACCTACAAGAAAGATTCGGAGCAATCCATCTGAGGG
rJMFF007M17+ AGAGGAGTTTGTCACCATGAGGACACCTACAAGAAAGATTCGGAGCAATCCATCTGAGGG
____________________________________________________________
consensus AGAGGAGTTTGTCACCATGAGGACACCTACAAGAAAGATTCGGAGCAATCCATCTGAGGG
. : . : . : . : . : . :
rJMFF010D09+ AACAGCAGAGTCCGATANTAAATCTGCTGGTGGAGTTTGACATTGTGCAATGAAGATCAA
rJMSF003A10+ AACAGCAGAGTCCGATACTAAATCTGCTGCTGGAGTTTGACATTGTGCAATGAAGATCAA
rJMSF024E21+ AACAGCAGAGTCCGATACTAAATCTGCTGCTGGAGTTTGACATTGTGCAATGAAGATCAA
rJMFF007M17+ AACAGCAGAGTCCGATACTAAATCTGCTGCTGGAGTTTGACATTGTGCAATGAAGATCAA
____________________________________________________________
consensus AACAGCAGAGTCCGATACTAAATCTGCTGCTGGAGTTTGACATTGTGCAATGAAGATCAA
. : . : . : . : . : . :
rJMFF010D09+ TCTGATGCATAAGCAACACACAGATGAAATTTGGTGAGGGCTGTTGGTTACCCTCTNTAC
rJMSF003A10+ TCTGATGCATAAGCAACACACAGATGAAATTTGGTGAGGGCTGTTGGTTACCCTCTCTAC
rJMSF024E21+ TCTGATGCATAAGCAACACACAGATGAAATTTGGTGAGGGCTGTTGGTTACCCTCTCTAC
rJMFF007M17+ TCTGATGCATAAGCAACACACAGATGAAATTTGGTGAGGGCTGTTGGTTACCCTCTCTAN
____________________________________________________________
consensus TCTGATGCATAAGCAACACACAGATGAAATTTGGTGAGGGCTGTTGGTTACCCTCTCTAC
. : . : . : . : . : . :
rJMFF010D09+ AATGTGCTTCAATACGGAAAAAAGAAGGGAAAATGGTTGTTTTGCTTGGTTTTCTCCTCG
rJMSF003A10+ AATGTGCTTCAATACGGAAAAAAGAAGGGAAAATGGTTGTTTTGCTTGGTTTTCTCCTCG
rJMSF024E21+ AATGTGCTTCAATACGGAAAAAAGAAGGGAAAATGGTTGTTTTGCTTGGTTTTCTCCTCG
rJMFF007M17+ AATGTGCTTCAATACGGAAAAAAGAAGGGAAAATGGTTGTTTTGCTTGGTTTTCTCCTCG
____________________________________________________________
consensus AATGTGCTTCAATACGGAAAAAAGAAGGGAAAATGGTTGTTTTGCTTGGTTTTCTCCTCG
. : . : . : . : . : . :
rJMFF010D09+ GTATTTTTTCAGTTTTTGTGCTAGCTTGATTTGATTTGTAGCATGTGCATAGTGGAGAT
rJMSF003A10+ GTATTTTTTCAGTTTTTGTGCTAGCTTGATTTGATTTGTAGCATGTGCATAGTGGAGATT
rJMSF024E21+ GTATTTTTTCAGTTTTTGTGCTAGCTTGATTTGATTTGTAGCATGTGCATAGTGGAGATT
rJMFF007M17+ GTATTTTTTCAGTTTTTGTGCTAGCTTGATTTGATTTGTAGCATGTGCATAGTGGAGATT
____________________________________________________________
consensus GTATTTTTTCAGTTTTTGTGCTAGCTTGATTTGATTTGTAGCATGTGCATAGTGGAGATT
. : . : . : . : . : . :
rJMSF003A10+ GAAGCCTGCATGAACATATTAATCAGAGGAAGGATATGGACAATATCACATTCGTCTACC
rJMSF024E21+ GAAGCCTGCATGAACATATTAATCAGAGGAAGGATATGGACAATATCACATTCGTCTACC
rJMFF007M17+ GAAGCCTGCATGAACATATTAATCAGAGGAAGGATATGGACAATATCACATTCGTCTACC
____________________________________________________________
consensus GAAGCCTGCATGAACATATTAATCAGAGGAAGGATATGGACAATATCACATTCGTCTACC
. : . : . : . : . : . :
rJMSF003A10+ ACAAAGTCGGCAGGCATGGAACCTAAAAATTAGAAGGGGGAATTCACGCACACAAGACGG
rJMSF024E21+ ACAAATTCGGCAGGCATGGAACCTAAAAATTAGAAGGGGGAATTCACGCACACAAGATGG
rJMFF007M17+ ACAAAGTCGGCAGGCATGGAACCTAAAAATTAGAAGGGGTAATTCACGCACACAAGATGG
____________________________________________________________
consensus ACAAAGTCGGCAGGCATGGAACCTAAAAATTAGAAGGGGGAATTCACGCACACAAGATGG
. : . : . : . : . : . :
rJMSF003A10+ CCTATTAGAGGAAATAAGAGAGCCCATCCATGATCCATGTGGAATGT
rJMSF024E21+ CCTATTAGAGGAAATAAGAGAGCCCATCCATGATCCATGTGGAATGT
rJMFF007M17+ CCTATTAGAGGAAATAAGAGAGCCCATCCATGATCCATGTGGAATGTTAAGTTTGTGTAG
____________________________________________________________
consensus CCTATTAGAGGAAATAAGAGAGCCCATCCATGATCCATGTGGAATGTTAAGTTTGTGTAG
. : . : . : . : . : . :
rJMFF007M17+ ACTTCAATAAAATGTGCATTTTTACAGACTGCTATTTGCGTGGTCGGCTTCGATTCCCAT
____________________________________________________________
consensus ACTTCAATAAAATGTGCATTTTTACAGACTGCTATTTGCGTGGTCGGCTTCGATTCCCAT
. : . : . : . : . : . :
rJMFF007M17+ ACTAATTTAACATGGGGTTTGCTATTTTCATTTTGGCCCTTCGATCTCTAGTTTGTCGAG
____________________________________________________________
consensus ACTAATTTAACATGGGGTTTGCTATTTTCATTTTGGCCCTTCGATCTCTAGTTTGTCGAG
. : . : . : . : . : . :
rJMFF007M17+ CTCCTGCTTCACTCACAAGTCACACCTTTTTGCAATGCTTTAAGTATAAAGTTCAAAAAA
____________________________________________________________
consensus CTCCTGCTTCACTCACAAGTCACACCTTTTTGCAATGCTTTAAGTATAAAGTTCAAAAAA