Contig 009620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006J14Sequence539013260 (3)750009620 (3)ref|XP_004239782.1|2e-65PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like
JMSF009M22Sequence208013260 (3)725009620 (3)ref|XP_004239782.1|2e-73PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like
JMSF039I07Sequence710013260 (3)ref|XP_009790164.1|179PREDICTED: uncharacterized protein LOC104237673 [Nicotiana sylvestris] ref|XP_00878009620 (3)ref|XP_004239782.1|4e-102PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like

Alignment

This contig is upended


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rJMSF039I07+               TTTCAGAGGACACTGTCATTGGTCAAGAAGACAGTTCAGTGGAGGCAGAGTTTCA
                      ____________________________________________________________
consensus                  TTTCAGAGGACACTGTCATTGGTCAAGAAGACAGTTCAGTGGAGGCAGAGTTTCA
 
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rJMSF039I07+          CTTTTCTATCACCACAAGAGCTACAGGCATGCTCTCATTTGGTCTTCTGGCATGGATATG
                      ____________________________________________________________
consensus             CTTTTCTATCACCACAAGAGCTACAGGCATGCTCTCATTTGGTCTTCTGGCATGGATATG
 
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rJMSF009M22+                                            GGGACTTGCTTGCTCCAACCTCAGAG
rJMSF039I07+          ATTTAAAGAAACGTCCTTGTCTTATCATTCGACTGGGACTTGCTTGCTCCAACCTCAGAG
rJMFF006J14+                                 ATCATTCGACTGGGACTTGCTTGCTCCANCCTCAGAG
                      ____________________________________________________________
consensus             ATTTAAAGAAACGTCCTTGTCTTATCATTCGACTGGGACTTGCTTGCTCCAACCTCAGAG
 
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rJMSF009M22+          GCAGTGAGAGAGACTTTTTTGCAAAAGTAATTGTTTCCCAGATAGAACATGGTGTTGTGA
rJMSF039I07+          GCAGTGAGAGAGACTTTTTTGCAAAAGTAATTGTTTCCCAGATAGAACATGGTGTTGTGA
rJMFF006J14+          GCAGTGAGAGAGACTTTTTTGCAAAA-------TTTCCCAGATAGAACATGGTGTTGTGA
                      ____________________________________________________________
consensus             GCAGTGAGAGAGACTTTTTTGCAAAAGTAATTGTTTCCCAGATAGAACATGGTGTTGTGA
 
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rJMSF009M22+          GCTTGATTGATGATGAGCATCCTCAGGTTGTGGTGTTAATGGACTGTGAAGGATTGTCGC
rJMSF039I07+          GCTTGATTGATGATGAGCATCCTCAGGTTGTGGTGTTAATGGACTGTGAAGGATTGTCGC
rJMFF006J14+          GCTTGATTGATGATGAGCATCCTCAGGTTGTGGTGTTAATGGACTGTGAAGGATTGTCGC
                      ____________________________________________________________
consensus             GCTTGATTGATGATGAGCATCCTCAGGTTGTGGTGTTAATGGACTGTGAAGGATTGTCGC
 
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rJMSF009M22+          CTTTTGGATTCCCTGTACAGATGATGAGATCTTGTGCTACACTTCTGCAAGACCATTACC
rJMSF039I07+          CTTTTGGATTCCCTGTACAGATGATGAGATCTTGTGCTACACTTCTGCAAGACCATTACC
rJMFF006J14+          CTTTTGGATTCCCTGTACAGATGATGAGATCTTGTGCTACACTTCTGCAAGACCATTACC
                      ____________________________________________________________
consensus             CTTTTGGATTCCCTGTACAGATGATGAGATCTTGTGCTACACTTCTGCAAGACCATTACC
 
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rJMSF009M22+          CAAACTGTCTTGGTTTGTTGATTGTTGTACGGATCCCTCATGTTGCTCAAGTGGTAATGC
rJMSF039I07+          CAAACTGTCTTGGTTTGTTGATTGTTGTACGGATCCCTCATGTTGCTCAAGTGGTAATGC
rJMFF006J14+          CAAACTGTCTTGGTTTGTTGATTGTTGTACGGATCCCTCATGTTGCTCAAGTGGTAATGC
                      ____________________________________________________________
consensus             CAAACTGTCTTGGTTTGTTGATTGTTGTACGGATCCCTCATGTTGCTCAAGTGGTAATGC
 
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rJMSF009M22+          AGACCTTATTCCAGGTTCTGAGACCATCCACGAGGCAGAAAGTAATGATCTTAGGAAGGA
rJMSF039I07+          AGACCTTATTCCAGGTTCTGAGACCATCCACGAGGCAGAAAGTAATGATCTTAGGAAGGA
rJMFF006J14+          AGACCTTATTCCAGGTTCTGAGACCATCCACGAGGCAGAAAGTAATGATCTTAGGAAGGA
                      ____________________________________________________________
consensus             AGACCTTATTCCAGGTTCTGAGACCATCCACGAGGCAGAAAGTAATGATCTTAGGAAGGA
 
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rJMSF009M22+          ACTATCAAGATTATCTCTCAAACAACCTGGATTCAGTCCCTTCCTTCCTTGGTGGGAATT
rJMSF039I07+          ACTATCAAGATTATCTCTCAAACAACCTGGATTCAGTCCCTTCCTTCCTTGGTGGGAATT
rJMFF006J14+          ACTATCAAGATTATCTCTCAAACAACCTGGATTCAGTCCCTTCCTTCCTTGGTGGGAATT
                      ____________________________________________________________
consensus             ACTATCAAGATTATCTCTCAAACAACCTGGATTCAGTCCCTTCCTTCCTTGGTGGGAATT
 
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rJMSF009M22+          GCTCATGCTCAAAATGTTCACCTCATAGCAATACAATCGAAGAAGAAGAAGAAATGCCTT
rJMSF039I07+          GCTCATGCTCAAAATGTTCACCTCATAGCAATACAATCGAAGAAGAAGAAGAAATGCCTT
rJMFF006J14+          GCTCATGCTCAAAATGTTCACCTCATAGCAATACAATCGAAGAAGAAGAAGAAATGCCTT
                      ____________________________________________________________
consensus             GCTCATGCTCAAAATGTTCACCTCATAGCAATACAATCGAAGAAGAAGAAGAAATGCCTT
 
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rJMSF009M22+          TGGCACTTTCCACCGCGCATCAAACAAATGACAACACCCCCGAAATTCATCATCATTCCC
rJMSF039I07+          TGGCACTTTCCACCCCGCATCAAACAAATGACAACACCCCCGAAATTCATCATCATTCCC
rJMFF006J14+          TGGCACTTTCCACCGCGCATCAAACAAATGACAACACCCCCGAAATTCATCATCATTCCC
                      ____________________________________________________________
consensus             TGGCACTTTCCACCGCGCATCAAACAAATGACAACACCCCCGAAATTCATCATCATTCCC
 
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rJMSF009M22+          TTTCAATTATAAATCCTACGAAGAAACCGTTGGTAAAGATTATTGTCACTGGAGTAGTTA
rJMSF039I07+          TTTCAATTATAAATCCTACGAAGAAACCGTTGGTAAAGATTATTGTCACTGGAGTAGTTA
rJMFF006J14+          TTTCAATTATAAATCCTACGAAGAAACCGTTGGTAAAGATTATTGTCACTGGAGTAGTTA
                      ____________________________________________________________
consensus             TTTCAATTATAAATCCTACGAAGAAACCGTTGGTAAAGATTATTGTCACTGGAGTAGTTA
 
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rJMSF009M22+          TGGTGTGGATCTTATTTGCCATCATTTTGGGAACTCACTATTCAAGATGGGTACCTCCTC
rJMSF039I07+          TGGTGTGGATCTTATTTGCCATCATTTTGGGAACTCACTATTCAAGATGGGTACCTCCTC
rJMFF006J14+          TGGTGTGGATCTTATTTGCCATCATTTTGGGAACTCACTATTCAAGATGGGTACCTCCTC
                      ____________________________________________________________
consensus             TGGTGTGGATCTTATTTGCCATCATTTTGGGAACTCACTATTCAAGATGGGTACCTCCTC
 
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rJMSF009M22+          TCTACCGGAGAAGCCATTCATAAGCATATTCTTTATTAGGTTTCAATATTCTTCTCTATG
rJMSF039I07+          TCTACCGGAGAAGCCATTCATAAGCATATTCTTTATTAGGTTTCAATATTCTTCTCTATG
rJMFF006J14+          TCTACCGGAGAAGCCATTCATAAGCATATTCTTTATTAGGTTTCAATATTCTTCTCTATG
                      ____________________________________________________________
consensus             TCTACCGGAGAAGCCATTCATAAGCATATTCTTTATTAGGTTTCAATATTCTTCTCTATG
 
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rJMSF009M22+          GGCAGCAGAATAGGTTTATATTGTCTTCGCTAACAGCT                      
rJMSF039I07+          GGCAGCAGAATAGGTTTATATTGTCTTCGCTAACAGCT                      
rJMFF006J14+          GGCAGCAGAATAGGTTTATATTGTCTTCGCTAACAGCTTCAAACTATTGCCAGCTAAATA
                      ____________________________________________________________
consensus             GGCAGCAGAATAGGTTTATATTGTCTTCGCTAACAGCTTCAAACTATTGCCAGCTAAATA