Contig 009616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006G17Sequence526004465 (2)ref|XP_009610824.1|5e-66PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Nicotiana tomento717009616 (2)ref|XP_009789700.1|1e-120PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Nicotiana sylvest
JMSF005E24Sequence374004465 (2)ref|NP_001239810.1|6e-36uncharacterized protein LOC100789793 [Glycine max] gb|ACU23139.1| unknown [Glyci254009616 (2)gb|ABD28518.2|8e-33Quinonprotein alcohol dehydrogenase-like [Medicago truncatula]

Alignment

This contig is upended


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rJMFF006G17+             GGGATATGCGTCAAAGAGGAGCAGTACAGACATTTCCTGACAAATATCAAATAACTG
                      ____________________________________________________________
consensus                GGGATATGCGTCAAAGAGGAGCAGTACAGACATTTCCTGACAAATATCAAATAACTG
 
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rJMFF006G17+          CAGTCAGTTTCTCTGATGCATCTGATAAGATATATACTGGTGGCATCGACAATGATGTGA
                      ____________________________________________________________
consensus             CAGTCAGTTTCTCTGATGCATCTGATAAGATATATACTGGTGGCATCGACAATGATGTGA
 
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rJMFF006G17+          AGGTGTGGGATCTTCGTAGGTCTGAGGTTACAATGACACTTCAAGGCCATCAAGACACGA
                      ____________________________________________________________
consensus             AGGTGTGGGATCTTCGTAGGTCTGAGGTTACAATGACACTTCAAGGCCATCAAGACACGA
 
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rJMFF006G17+          TTACGGGTATGTCATTGAGTCCAGATGGCTCTTATCTTCTAACCAACTCCATGGACTGCA
                      ____________________________________________________________
consensus             TTACGGGTATGTCATTGAGTCCAGATGGCTCTTATCTTCTAACCAACTCCATGGACTGCA
 
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rJMFF006G17+          GTCTTCGCATATGGGACATGCGCCCATATGCTCCACAAAATCGGTGTGTCAAGATTTTGG
                      ____________________________________________________________
consensus             GTCTTCGCATATGGGACATGCGCCCATATGCTCCACAAAATCGGTGTGTCAAGATTTTGG
 
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rJMSF005E24+                                                         TCACCAGATGGAA
rJMFF006G17+          AAGGGCACCAGCACAATTTTGAAAAGAACTTACTTAAATGTAGTTGGTCACCAGATGTAA
                      ____________________________________________________________
consensus             AAGGGCACCAGCACAATTTTGAAAAGAACTTACTTAAATGTAGTTGGTCACCAGATGTAA
 
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rJMSF005E24+          GCAAAGTANCTGCTGGCAGCTCTGACCGTATGGTNTACGTTTGGGACACAACNTCCAGGC
rJMFF006G17+          GCAAAGTAACTGCTGGCAGCTCTGACCGTATGGTTTACGTTTGGGACACAACTTCCAGGC
                      ____________________________________________________________
consensus             GCAAAGTAACTGCTGGCAGCTCTGACCGTATGGTTTACGTTTGGGACACAACTTCCAGGC
 
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rJMSF005E24+          GCATTTCGTATAAACTTCCTGGCCACACTGGATCTGTGAANGAGTGTGTCTTTCATCCCA
rJMFF006G17+          GCATTTTGTATAAACTTCCTGGCCACACTGGATCTGTGAATGAGTGTGTCTTTCATCCCA
                      ____________________________________________________________
consensus             GCATTTTGTATAAACTTCCTGGCCACACTGGATCTGTGAATGAGTGTGTCTTTCATCCCA
 
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rJMSF005E24+          CCGAACCTATCATTGGTTCGTGTAGTAGTGATAAACAGATCTATCTTGGTGAAATTTAAG
rJMFF006G17+          CCGAACCTATCATTGGTTCGTGTAGTAGTGATAAACAGATCTATCTTGGTGAAATTTAAG
                      ____________________________________________________________
consensus             CCGAACCTATCATTGGTTCGTGTAGTAGTGATAAACAGATCTATCTTGGTGAAATTTAAG
 
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rJMSF005E24+          TAATCAGATGACTTGTAGTAAAACTCGGGAGTTGAGNTGTGTTTTGNCTGTCAGCTAT  
rJMFF006G17+          TAATCAGATGACTTGTAGTAAAACTCTGGAGTTGAGATGTGTTTTGGCTGTCAGCTATTG
                      ____________________________________________________________
consensus             TAATCAGATGACTTGTAGTAAAACTCTGGAGTTGAGATGTGTTTTGGCTGTCAGCTATTG
 
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rJMFF006G17+          TCTAGATTGTAGTTCCTTCCCTAGTTGGATTTTACATTTGTACGAGAACATGAAGACTCA
                      ____________________________________________________________
consensus             TCTAGATTGTAGTTCCTTCCCTAGTTGGATTTTACATTTGTACGAGAACATGAAGACTCA
 
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rJMFF006G17+          TAAAAGTTTGTTCTCCTGTCCTGTGATTGTAGAAAAAGGATAGTCAACGGATGGAGAGAT
                      ____________________________________________________________
consensus             TAAAAGTTTGTTCTCCTGTCCTGTGATTGTAGAAAAAGGATAGTCAACGGATGGAGAGAT