Contig 009615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E18Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]748009615 (6)ref|XP_011084858.1|5e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFF025M08Sequence537009615 (6)ref|XP_004240888.1|2e-39PREDICTED: PRA1 family protein B3-like [Solanum lycopersicum]739009615 (6)ref|XP_011084858.1|6e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFF027H21Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]740009615 (6)ref|XP_011084858.1|6e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFN017C22Sequence623009615 (6)ref|XP_009785829.1|1e-52PREDICTED: PRA1 family protein B1 [Nicotiana sylvestris]
JMSF013K19Sequence376009615 (6)ref|XP_004240888.1|4e-29PREDICTED: PRA1 family protein B3-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF013K19- CAGTAAAAGAATCGCACTTGTTAACGTCTGAG
JMFF025M08- AGTAAAAGAATCGCACTTGTTAACGTCTGAG
                      ____________________________________________________________
consensus CAGTAAAAGAATCGCACTTGTTAACGTCTGAG
 
. : . : . : . : . : . :
JMSF013K19- TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
JMFF025M08- TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
                      ____________________________________________________________
consensus TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
 
. : . : . : . : . : . :
JMSF013K19- ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
JMFF025M08- ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
                      ____________________________________________________________
consensus ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
 
. : . : . : . : . : . :
JMSF013K19- CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
JMFF025M08- CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
                      ____________________________________________________________
consensus CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
 
. : . : . : . : . : . :
JMSF013K19- CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
JMFF025M08- CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
                      ____________________________________________________________
consensus CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
 
. : . : . : . : . : . :
JMSF013K19- CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
JMFF025M08- CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
JMFN017C22- CGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
rJMFF006E18+ TCGCGCGTGCGCAAGAACTTCTCATA
                      ____________________________________________________________
consensus CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
 
. : . : . : . : . : . :
JMSF013K19- CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTT
JMFF025M08- CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
JMFN017C22- CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF027H21+ AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF025M08+ AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF006E18+ CTTCCGCGTCAAACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
                      ____________________________________________________________
consensus CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
 
. : . : . : . : . : . :
JMFF025M08- ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
JMFN017C22- ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF027H21+ ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF025M08+ ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF006E18+ ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
                      ____________________________________________________________
consensus ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
 
. : . : . : . : . : . :
JMFF025M08- TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
JMFN017C22- TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF027H21+ TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF025M08+ TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF006E18+ TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
                      ____________________________________________________________
consensus TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
 
. : . : . : . : . : . :
JMFF025M08- TCGGGATCTTAGTTGTGTCTACCATTG
JMFN017C22- TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF027H21+ TCGGGATCTTAGTTGTGTCTACCATTGTTGTCGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF025M08+ TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF006E18+ TCGGGATCTTAGTTGTGTCTACCATTGTTGTCGTGTTCCTCACTAGCGTCGGATCGCTAC
                      ____________________________________________________________
consensus TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
 
. : . : . : . : . : . :
JMFN017C22- TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTNTTAGGATGC
rJMFF027H21+ TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
rJMFF025M08+ TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
rJMFF006E18+ TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
                      ____________________________________________________________
consensus TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
 
. : . : . : . : . : . :
JMFN017C22- CGGAGGACTTGTTCCTTGACGATCAGGA
rJMFF027H21+ CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
rJMFF025M08+ CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
rJMFF006E18+ CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
                      ____________________________________________________________
consensus CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
 
. : . : . : . : . : . :
rJMFF027H21+ GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
rJMFF025M08+ GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
rJMFF006E18+ GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
                      ____________________________________________________________
consensus GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
 
. : . : . : . : . : . :
rJMFF027H21+ CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
rJMFF025M08+ CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
rJMFF006E18+ CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
                      ____________________________________________________________
consensus CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
 
. : . : . : . : . : . :
rJMFF027H21+ TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
rJMFF025M08+ TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
rJMFF006E18+ TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
                      ____________________________________________________________
consensus TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
 
. : . : . : . : . : . :
rJMFF027H21+ GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
rJMFF025M08+ GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
rJMFF006E18+ GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
                      ____________________________________________________________
consensus GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
 
. : . : . : . : . : . :
rJMFF027H21+ ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
rJMFF025M08+ ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
rJMFF006E18+ ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
                      ____________________________________________________________
consensus ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
 
. : . : . : . : . : . :
rJMFF027H21+ AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAA
rJMFF025M08+ AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAA
rJMFF006E18+ AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAATATGAATC
                      ____________________________________________________________
consensus AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAATATGAATC