Contig 009615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E18Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]748009615 (6)ref|XP_011084858.1|5e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFF025M08Sequence537009615 (6)ref|XP_004240888.1|2e-39PREDICTED: PRA1 family protein B3-like [Solanum lycopersicum]739009615 (6)ref|XP_011084858.1|6e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFF027H21Sequence643008734 (2)gb|KHG20192.1|9e-7460S ribosomal L24 [Gossypium arboreum]740009615 (6)ref|XP_011084858.1|6e-30PREDICTED: PRA1 family protein B3 [Sesamum indicum]
JMFN017C22Sequence623009615 (6)ref|XP_009785829.1|1e-52PREDICTED: PRA1 family protein B1 [Nicotiana sylvestris]
JMSF013K19Sequence376009615 (6)ref|XP_004240888.1|4e-29PREDICTED: PRA1 family protein B3-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF013K19-                                       CAGTAAAAGAATCGCACTTGTTAACGTCTGAG
JMFF025M08-                                        AGTAAAAGAATCGCACTTGTTAACGTCTGAG
                      ____________________________________________________________
consensus                                         CAGTAAAAGAATCGCACTTGTTAACGTCTGAG
 
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JMSF013K19-           TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
JMFF025M08-           TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
                      ____________________________________________________________
consensus             TCGGCCGTCTCTCTCTTCTCTCCACCCTCGATTACACAAGGAGAGAGAGAGATTCAGAGA
 
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JMSF013K19-           ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
JMFF025M08-           ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
                      ____________________________________________________________
consensus             ACACACAAAGATGGCTTCACCCGCGACGATTCCGATCTCGGCTCCTCAATCCGCCGCCGG
 
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JMSF013K19-           CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
JMFF025M08-           CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
                      ____________________________________________________________
consensus             CCAAGCTCAGACGGCAATCTCCACTCCAGCTTTCCGGGCGTTCATCTCCCGGATTTCCTC
 
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JMSF013K19-           CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
JMFF025M08-           CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
                      ____________________________________________________________
consensus             CTCCATCAGGCAAGGCTTGTCTCTGCGACGCCCGTGGTCGGAGCTTCTGGATCGGACCTC
 
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JMSF013K19-           CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
JMFF025M08-           CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
JMFN017C22-                  CGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
rJMFF006E18+                                            TCGCGCGTGCGCAAGAACTTCTCATA
                      ____________________________________________________________
consensus             CTTTTCCCGGCCGGACACTCTCTCCGAGGCCGCCTCGCGCGTGCGCAAGAACTTCTCATA
 
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JMSF013K19-           CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTT               
JMFF025M08-           CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
JMFN017C22-           CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF027H21+                     AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF025M08+                     AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
rJMFF006E18+          CTTCCGCGTCAAACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
                      ____________________________________________________________
consensus             CTTCCGCGTC-AACTACGTTACTTTACTCGCCGCCGTACTCGCTTTCTCGCTCCTCTCTC
 
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JMFF025M08-           ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
JMFN017C22-           ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF027H21+          ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF025M08+          ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
rJMFF006E18+          ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
                      ____________________________________________________________
consensus             ACCCGCTGTCTCTCCTCGTTCTCCTGGCCCTCCTCGCCGCCTGGTTCTTCCTCTACCTCT
 
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JMFF025M08-           TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
JMFN017C22-           TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF027H21+          TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF025M08+          TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
rJMFF006E18+          TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
                      ____________________________________________________________
consensus             TCCGCCCGTCGGATCAGCCGGTCGTCATCTTCGGCCGCACCTTCTCCGACCGTGAAACGC
 
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JMFF025M08-           TCGGGATCTTAGTTGTGTCTACCATTG                                 
JMFN017C22-           TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF027H21+          TCGGGATCTTAGTTGTGTCTACCATTGTTGTCGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF025M08+          TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
rJMFF006E18+          TCGGGATCTTAGTTGTGTCTACCATTGTTGTCGTGTTCCTCACTAGCGTCGGATCGCTAC
                      ____________________________________________________________
consensus             TCGGGATCTTAGTTGTGTCTACCATTGTTGTTGTGTTCCTCACTAGCGTCGGATCGCTAC
 
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JMFN017C22-           TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTNTTAGGATGC
rJMFF027H21+          TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
rJMFF025M08+          TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
rJMFF006E18+          TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
                      ____________________________________________________________
consensus             TCATCTCCGCTCTCCTTGTCGGATTAGCTCTCGTGTGTACTCATGGAGCTTTTAGGATGC
 
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JMFN017C22-           CGGAGGACTTGTTCCTTGACGATCAGGA                                
rJMFF027H21+          CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
rJMFF025M08+          CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
rJMFF006E18+          CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
                      ____________________________________________________________
consensus             CGGAGGACTTGTTCCTTGACGATCAGGAGCCAGCCAACGCCGGATTCCTCTCCTTTCTCG
 
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rJMFF027H21+          GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
rJMFF025M08+          GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
rJMFF006E18+          GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
                      ____________________________________________________________
consensus             GCGGTGCGGCCTCCACCGCAGCCGCTGCCGCTGCCCCAGCCGTCGCAACTCGCGTGTAAT
 
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rJMFF027H21+          CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
rJMFF025M08+          CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
rJMFF006E18+          CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
                      ____________________________________________________________
consensus             CAGATCGCATCTGATTAGATCTCATTCAAGTGGAGAAACTCAAAGGAGGTTCGTTAAGGC
 
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rJMFF027H21+          TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
rJMFF025M08+          TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
rJMFF006E18+          TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
                      ____________________________________________________________
consensus             TTCTACACATACGTGGTTAATTTGGTTACCTACTCAGATTGAACTGTGATATTAAAATGA
 
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rJMFF027H21+          GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
rJMFF025M08+          GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
rJMFF006E18+          GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
                      ____________________________________________________________
consensus             GAAATAGCCACTGATTTTGCAGAAATTCGTTAGATACTCTGTATCTAGTTTGAATCTGTT
 
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rJMFF027H21+          ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
rJMFF025M08+          ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
rJMFF006E18+          ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
                      ____________________________________________________________
consensus             ATCTCCTAGTTTAGATCTATATACATTTGCTATCTTTGATTTCCTGTGTCTGTATCATTA
 
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rJMFF027H21+          AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAA        
rJMFF025M08+          AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAA        
rJMFF006E18+          AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAATATGAATC
                      ____________________________________________________________
consensus             AATCATTGATTTTCCTGATGGAGTTTGCAATCTGTTAATTGTTACATTTCAATATGAATC