| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006A19 | Sequence | 485 | 009614 (7) | ref|XP_011080141.1| | 3e-36 | PREDICTED: monothiol glutaredoxin-S10-like [Sesamum indicum] | 723 | 009614 (7) | ref|XP_002267052.1| | 4e-54 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] |
| JMFF028B06 | Sequence | 501 | 009614 (7) | ref|XP_002267052.1| | 1e-40 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] | 706 | 009614 (7) | ref|XP_002267052.1| | 3e-54 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] |
| JMFN019C06 | Sequence | 641 | 009614 (7) | ref|XP_002267052.1| | 2e-54 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] | |||||
| JMFN030M11 | Sequence | 611 | 009614 (7) | ref|XP_002267052.1| | 1e-54 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] | |||||
| JMSF011G18 | Sequence | 404 | 009614 (7) | ref|XP_002267052.1| | 7e-23 | PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera] | 805 | 017091 | ref|XP_009129513.1| | 188 | PREDICTED: uncharacterized protein LOC103854323 [Brassica rapa] |
This contig is upended
. : . : . : . : . : . :
rJMFF006A19- CTC
____________________________________________________________
consensus CTC
. : . : . : . : . : . :
rJMFF028B06- TTTGGTTTTTTGATTGGATTTCACAGAATACCGTAGTTTATACACTGGAATTGGGATAAA
JMFN019C06+ GATAAA
JMFN030M11+ CGTAGTTTATACACTGGAATTGGGATAAA
rJMFF006A19- TTTGGTTTTTTGATTGGATTTCACAGAATACCGTAGTTTATACACTGGAATTGGGATAAA
____________________________________________________________
consensus TTTGGTTTTTTGATTGGATTTCACAGAATACCGTAGTTTATACACTGGAATTGGGATAAA
. : . : . : . : . : . :
rJMFF028B06- AATGCAACAACCATTAAACAATCGACTTTCTTGCAAGTCTGCAATAGCTTCTGCATCTAA
JMFN019C06+ AATGCAACAACCATTAAACAATCGACTTTCTTGCAAGTCTGCAATAGCTTCTGCATCTAA
JMFN030M11+ AATGCAACAACCATTAAACAATCGACTTTCTTGCAAGTCTGCAATAGCTTCTGCATCTAA
rJMFF006A19- AATGCAACAACCATTAAACAATCGACTTTCTTGCAAGTCTGCAATAGCTTCTGCATCTAA
____________________________________________________________
consensus AATGCAACAACCATTAAACAATCGACTTTCTTGCAAGTCTGCAATAGCTTCTGCATCTAA
. : . : . : . : . : . :
rJMFF028B06- GAAAGCTTTATGCTTTTCTGGCATTAGCTTCTGATAGCAAATTCTCGAGTTCTCCTTTCT
JMFN019C06+ GAAAGCTTTATGCTTTTCTGGCATTAGCTTCTGATAGCAAATTCTCGAGTTCTCCTTTCT
JMFN030M11+ GAAAGCTTTATGCTTTTCTGGCATTAGCTTCTGATAGCAAATTCTCGAGTTCTCCTTTCT
rJMFF006A19- GAAAGCTTTATGCTTTTCTGGCATTAGCTTCTGATAGCAAATTCTCGAGTTCTCCTTTCT
____________________________________________________________
consensus GAAAGCTTTATGCTTTTCTGGCATTAGCTTCTGATAGCAAATTCTCGAGTTCTCCTTTCT
. : . : . : . : . : . :
JMFF028B06+ ACCACCGATATGTTTGCCCCCAATGAACACATTAG
rJMFF028B06- GATACAGCTCGATGGTATCTGAACAACCACCGATATGTTTGCCCCCAATGAACACATTAG
JMFN019C06+ GATACAGCTCGATGGTATCTGAACAACCACCGATATGTTTGCCCCCAATGAACACATTAG
JMFN030M11+ GATACAGCTCGATGGTATCTGAACAACCACCGATATGTTTGCCCCCAATGAACACATTAG
JMFF006A19+ CCCCCAATGAACACATTAG
rJMFF006A19- GATACAGCTCGATGGTATCTGAACAACCACCGATATGTTTGCCCCCAATGAACACATTAG
____________________________________________________________
consensus GATACAGCTCGATGGTATCTGAACAACCACCGATATGTTTGCCCCCAATGAACACATTAG
. : . : . : . : . : . :
JMFF028B06+ GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
rJMFF028B06- GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
JMFN019C06+ GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
JMFN030M11+ GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
JMSF011G18+ TGCGATCCTTGCTGAC
JMFF006A19+ GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
rJMFF006A19- GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
____________________________________________________________
consensus GAACAGTACGCTGTCCAGTGAGACCTTCCAGCACCTTCTGAATTTGCGATCCTTGCTGAC
. : . : . : . : . : . :
JMFF028B06+ CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
rJMFF028B06- CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
JMFN019C06+ CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
JMFN030M11+ CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
JMSF011G18+ CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
JMFF006A19+ CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
rJMFF006A19- CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
____________________________________________________________
consensus CCATTTGGTCCAATTCAACAACAAGTGGATCCAAGCCAAGCCTTCTGAACAAAGATTTCA
. : . : . : . : . : . :
JMFF028B06+ CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
rJMFF028B06- CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
JMFN019C06+ CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
JMFN030M11+ CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
JMSF011G18+ CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
JMFF006A19+ CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
rJMFF006A19- CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
____________________________________________________________
consensus CCTGACCCGAGTACGAGCACCAAGTTTTGGAGTAGACAACGACTGGGTTCTCGCTGACGG
. : . : . : . : . : . :
JMFF028B06+ TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
rJMFF028B06- TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
JMFN019C06+ TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
JMFN030M11+ TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
JMSF011G18+ TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
JMFF006A19+ TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
rJMFF006A19- TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
____________________________________________________________
consensus TCTTCTTCACGCTGTCCTCCAAGCCGGAGGAGCTGGACGAATCCGACATGGCGCGAATCA
. : . : . : . : . : . :
JMFF028B06+ GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
rJMFF028B06- GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
JMFN019C06+ GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
JMFN030M11+ GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
JMSF011G18+ GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
JMFF006A19+ GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
rJMFF006A19- GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
____________________________________________________________
consensus GGGTAGGCGCCCGTTTTCGGTGGACACATTTCGCGAGACTCGTTAAGCTTCTGCTGCGTA
. : . : . : . : . : . :
JMFF028B06+ ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
rJMFF028B06- ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
JMFN019C06+ ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
JMFN030M11+ ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
JMSF011G18+ ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
JMFF006A19+ ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
rJMFF006A19- ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
____________________________________________________________
consensus ATCTGATGTTTCGATTGTCGCGATTGCAAAGCGCAGATGGGTTACGGGAAGGCAAGAGAG
. : . : . : . : . : . :
JMFF028B06+ GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
rJMFF028B06- GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
JMFN019C06+ GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
JMFN030M11+ GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAG
JMSF011G18+ GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
JMFF006A19+ GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
rJMFF006A19- GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
____________________________________________________________
consensus GGCGAAGGGAAGACGTTAGTGATAAGGAAGCCATGCCTCTAGTCATAGCCATAGTTGTAG
. : . : . : . : . : . :
JMFF028B06+ TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGATTGGTTTTTCT
rJMFF028B06- TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGATTGGTTTTTCT
JMFN019C06+ TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGA
JMSF011G18+ TTGCAGGCGTACCCGCCATTGTTACC
JMFF006A19+ TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGATTGGTTTTTCT
rJMFF006A19- TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGATTGGNTTTTCTCGGTTCTCGACGAA
____________________________________________________________
consensus TTGCAGGCGTACCCGCCATTGTTACCTAACTCAGATTGGTTTTTCTCGGTTCTCGACGAA