Contig 009609:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005C10Sequence498009609 (3)ref|XP_004245151.1|8e-64PREDICTED: lachrymatory-factor synthase [Solanum lycopersicum]627009609 (3)ref|XP_004245151.1|2e-64PREDICTED: lachrymatory-factor synthase [Solanum lycopersicum]
JMFN008I15Sequence596009609 (3)ref|XP_004245151.1|1e-64PREDICTED: lachrymatory-factor synthase [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN008I15+                                                       AGTAAAATTTATTCAA
rJMFF005C10-                                           ATTATATTTGGAGTAAAATTTATTCAA
                      ____________________________________________________________
consensus                                              ATTATATTTGGAGTAAAATTTATTCAA
 
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JMFN008I15+           CCGGCCATTTCTCCTTACATAATACATGACAAAATTAAACAATATGAAAAATTTAGAAAA
rJMFF005C10-          CCGGCCATTTCTCCTTACATAATACATGACAAAATTAAACAATATGAAAAATTTAGAAAA
                      ____________________________________________________________
consensus             CCGGCCATTTCTCCTTACATAATACATGACAAAATTAAACAATATGAAAAATTTAGAAAA
 
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JMFN008I15+           GTAGAATAATATTCTAAGAAATTGCTAAGAAGTCCTCCATCTTCTTAGCCATGCTCTGCA
JMFF005C10+                                                    TTCTTAGCCATGCTCTGCA
rJMFF005C10-          GTAGAATAATATTCTAAGAAATTGCTAAGAAGTCCTCCATCTTCTTAGCCATGCTCTGCA
                      ____________________________________________________________
consensus             GTAGAATAATATTCTAAGAAATTGCTAAGAAGTCCTCCATCTTCTTAGCCATGCTCTGCA
 
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JMFN008I15+           GCCCAAGATCATAAATCTTCACCAGATCCTCCAATCTCCAACCCTCCACCGGATCAACGG
JMFF005C10+           GCCCAAGATCATAAATCTTCACCAGATCCTCCAATCTCCAACCCTCCACCGGATCAACGG
rJMFF005C10-          GCCCAAGATCATAAATCTTCACCAGATCCTCCAATCTCCAACCCTCCACCGGATCAACGG
                      ____________________________________________________________
consensus             GCCCAAGATCATAAATCTTCACCAGATCCTCCAATCTCCAACCCTCCACCGGATCAACGG
 
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JMFN008I15+           TAAATCCCCATTCAATCTCGCAGCCTTCGCCGCCACCGGCTGGAACGATCTTCACCGTCG
JMFF005C10+           TAAATCCCCATTCAATCTCGCAGCCTTCGCCGCCACCGGCTGGAACGATCTTCACCGTCG
rJMFF005C10-          TAAATCCCCATTCAATCTCGCAGCCTTCGCCGCCACCGGCTGGAACGATCTTCACCGTCG
                      ____________________________________________________________
consensus             TAAATCCCCATTCAATCTCGCAGCCTTCGCCGCCACCGGCTGGAACGATCTTCACCGTCG
 
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JMFN008I15+           AAACATAGTTCTTGAACCCTATGCTGCCATCCAACATCTCGTAGCTCAAAGTCCTCGCAG
JMFF005C10+           AAACATAGTTCTTGAACCCTATGCTGCCATCCAACATCTCGTAGCTCAAAGTCCTCGCAG
rJMFF005C10-          AAACATAGTTCTTGAACCCTATGCTGCCATCCAACATCTCGTAGCTCAAAGTCCTCGCAG
                      ____________________________________________________________
consensus             AAACATAGTTCTTGAACCCTATGCTGCCATCCAACATCTCGTAGCTCAAAGTCCTCGCAG
 
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JMFN008I15+           CTGGATCCATGGCTATCAACCTTTCCTTGCTCCAGTTTGTCTTCACCGCCGCGGGGTTCT
JMFF005C10+           CTGGATCCATGGCTATCAACCTTTCCTTGCTCCAGTTTGTCTTCACCGCCGCGGGGTTCT
rJMFF005C10-          CTGGATCCATGGCTATCAACCTTTCCTTGCTCCAGTTTGTCTTCACCGCCGCGGGGTTCT
                      ____________________________________________________________
consensus             CTGGATCCATGGCTATCAACCTTTCCTTGCTCCAGTTTGTCTTCACCGCCGCGGGGTTCT
 
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JMFN008I15+           CTTCAGTCTTGCCGGAAAGGGAGAATCCGGCGCAGTAGCGGATGCAGCCAAGTTGGGCGT
JMFF005C10+           CTTCAGTCTTGCCGGAAAGGGAGAATCCGGCGCAGTAGCGGATGCAGCCAAGTTGGGCGT
rJMFF005C10-          CTTCAGTCTTGCCGGAAAGGGAGAATCCGGCGCAGTAGCGGATGCAGCCAAGTTGGGCGT
                      ____________________________________________________________
consensus             CTTCAGTCTTGCCGGAAAGGGAGAATCCGGCGCAGTAGCGGATGCAGCCAAGTTGGGCGT
 
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JMFN008I15+           TGTTGCCGTGAATCCCATGGCAAGTGGAGAGGCCAGGGAACCATTTTCCTAGGCCAAAGA
JMFF005C10+           TGTTGCCGTGAATCCCATGGCAAGTGGAGAGGCCAGGGAACCATTTTCCTAGGCCAAAGA
rJMFF005C10-          TGTTGCCGTGAATCCCATGGCAAGTGGAGAGGCCAGGGAACCATTTTCCTAGGCCAAAGA
                      ____________________________________________________________
consensus             TGTTGCCGTGAATCCCATGGCAAGTGGAGAGGCCAGGGAACCATTTTCCTAGGCCAAAGA
 
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JMFN008I15+           AGTCTTGGAAGAGTGGCCAAATCTCATCTGCGGTCGCCTTTTGTAGCCTTGCTGAAACCT
JMFF005C10+           AGTCTTGGAAGAGTGGCCAAATCTCATCTGCGGTCGCCTTTTGTAGCCTTGCTGAAACCT
rJMFF005C10-          AGTCTTGGAAGAGTGGCCAAATCTCATCTGCGGTCGCCTTTTGTAGCCTTGCTGAAACCT
                      ____________________________________________________________
consensus             AGTCTTGGAAGAGTGGCCAAATCTCATCTGCGGTCGCCTTTTGTAGCCTTGCTGAAACCT
 
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JMFN008I15+           TGGCTTCCCACTTCTGCTGTTCCATCTTCAATTTTCGCTG                    
JMFF005C10+           TGGCTTCCCACTTCTGCTGTTCCATCTTCAATTTTCGCTGTGAAATGTGAATGG      
rJMFF005C10-          TGGCTTCCCACTTCTGCTGTTCCATCTTCAATTTTCGCTGTGAAATGTGAATGGGAGTGT
                      ____________________________________________________________
consensus             TGGCTTCCCACTTCTGCTGTTCCATCTTCAATTTTCGCTGTGAAATGTGAATGGGAGTGT