Contig 009607:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L02Sequence795009607 (2)ref|XP_009794799.1|5e-98PREDICTED: MICOS complex subunit MIC60 isoform X1 [Nicotiana sylvestris]
JMFF027O11Sequence602000153 (2)ref|XP_006363950.1|8e-38PREDICTED: formation of crista junctions protein 1-like isoform X1 [Solanum tub697009607 (2)ref|XP_009794799.1|4e-88PREDICTED: MICOS complex subunit MIC60 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF004L02+                                                       TGAAGCAAATCTTCA
                      ____________________________________________________________
consensus                                                          TGAAGCAAATCTTCA
 
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rJMFF027O11+                               TTTCTATGCACGCTCCGAAGAAGCTAGGCAGACTCATTC
rJMFF004L02+          TATAAATGCCTTGTGTATGGCTTTCTATGCACGCTCCGAAGAAGCTAGGCAGACTCATTC
                      ____________________________________________________________
consensus             TATAAATGCCTTGTGTATGGCTTTCTATGCACGCTCCGAAGAAGCTAGGCAGACTCATTC
 
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rJMFF027O11+          TGTTCACAAGCTTGCTTTGGGAGCACTTGCATTGGAGGATTCCCTGTCCAAAGGGCTACC
rJMFF004L02+          TGTTCACAAGCTTGCTTTGGGAGCACTTGCATTGGAGGATTCCCTGTCCAAAGGGCTACC
                      ____________________________________________________________
consensus             TGTTCACAAGCTTGCTTTGGGAGCACTTGCATTGGAGGATTCCCTGTCCAAAGGGCTACC
 
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rJMFF027O11+          AATTCAGAATGAAATAGAAGCTCTGCATCCTTATCTTAAAGGGATTGATAAAGACTCTCT
rJMFF004L02+          AATTCAGAATGAAATAGAAGCTCTGCATCCTTATCTTAAAGGGATTGATAAAGACTCTCT
                      ____________________________________________________________
consensus             AATTCAGAATGAAATAGAAGCTCTGCATCCTTATCTTAAAGGGATTGATAAAGACTCTCT
 
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rJMFF027O11+          TCTAGAGTTAGTCCTTTCTTCTCTTCCTGAAGAAACACAGAAGTATGGTAGTGATACTTT
rJMFF004L02+          TCTAGAGTTAGTCCTTTCTTCTCTTCCTGAAGAAACACAGAAGTATGGTAGTGATACTTT
                      ____________________________________________________________
consensus             TCTAGAGTTAGTCCTTTCTTCTCTTCCTGAAGAAACACAGAAGTATGGTAGTGATACTTT
 
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rJMFF027O11+          ATTGCAACTGAATCACAAGTTTGATGCCTTGAAAGGATCTCTACGACACTTCAGTCTGAT
rJMFF004L02+          ATTGCAACTGAATCACAAGTTTGATGCCTTGAAAGGATCTCTACGACACTTCAGTCTGAT
                      ____________________________________________________________
consensus             ATTGCAACTGAATCACAAGTTTGATGCCTTGAAAGGATCTCTACGACACTTCAGTCTGAT
 
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rJMFF027O11+          TCCCCCGGGGGGAGGTGGGATTTTGACACATTCTTTGGCTTTGGTTGCATCTTGGTTAAA
rJMFF004L02+          TCCCCCGGGGGGAGGTGGGATTTTGACACATTCTTTGGCTTTGGTTGCATCTTGGTTAAA
                      ____________________________________________________________
consensus             TCCCCCGGGGGGAGGTGGGATTTTGACACATTCTTTGGCTTTGGTTGCATCTTGGTTAAA
 
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rJMFF027O11+          GGTTAGACAGGTTGACAAATCCGGTGATGGTATTGAATCTCTCATTAATAGAGTAGAGAT
rJMFF004L02+          GGTTAGACAGGTTGACAAATCCGGTGATGGTATTGAATCTCTCATTAATAGAGTAGAGAT
                      ____________________________________________________________
consensus             GGTTAGACAGGTTGACAAATCCGGTGATGGTATTGAATCTCTCATTAATAGAGTAGAGAT
 
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rJMFF027O11+          CTTGTTAGCCGAGGATAAACTAATTGAAGCTGCAGATGAACTCGAGAAGGGCGTCAAGGG
rJMFF004L02+          CTTGTTAGCCGAGGATAAACTAATTGAAGCTGCAGATGAACTCGAGAAGGGCGTCAAGGG
                      ____________________________________________________________
consensus             CTTGTTAGCCGAGGATAAACTAATTGAAGCTGCAGATGAACTCGAGAAGGGCGTCAAGGG
 
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rJMFF027O11+          CACTCAAGCCGCCGAAGTGGTTGATGAATGGATCAGGCGTGCTAGAAACAGAGCTATCAC
rJMFF004L02+          CACTCAAGCCGCCGAAGTGGTTGATGAATGGATCAGGCGTGCTAGAAACAGAGCTATCAC
                      ____________________________________________________________
consensus             CACTCAAGCCGCCGAAGTGGTTGATGAATGGATCAGGCGTGCTAGAAACAGAGCTATCAC
 
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rJMFF027O11+          CGATCAAGCTCTAACCCTATTGCAAGCTTATGCCACTACCATCAGTCTAACCTGAACTTC
rJMFF004L02+          CGATCAAGCTCTAACCCTATTGCAAGCTTATGCCACTACCATCAGTCTAACCTGAACTTC
                      ____________________________________________________________
consensus             CGATCAAGCTCTAACCCTATTGCAAGCTTATGCCACTACCATCAGTCTAACCTGAACTTC
 
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rJMFF027O11+          ATAACCCACTATTCTCTCTATTCACATTTTGGCTCATAACATTTAGTTTTCCCTTCTATA
rJMFF004L02+          ATAACCCACTATTCTCTCTATTCACATTTTGGCTCATAACATTTAGTTTTCCCTTCTATA
                      ____________________________________________________________
consensus             ATAACCCACTATTCTCTCTATTCACATTTTGGCTCATAACATTTAGTTTTCCCTTCTATA
 
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rJMFF027O11+          TTTTGCCTTGACAAAGCTCGGCCTTCAATAAGTAACATATGTGAATTTCGCAGTACAC  
rJMFF004L02+          TTTTGCCTTGACAAAGCTCGGCCTTCAATAAGTAACATATGTGAATTTCGCAGTACACTG
                      ____________________________________________________________
consensus             TTTTGCCTTGACAAAGCTCGGCCTTCAATAAGTAACATATGTGAATTTCGCAGTACACTG
 
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rJMFF004L02+          AATTAAATAAAACCGTAGTTGAAACATAACAAATTTTTGTATGACAGATTCATATAGAGG
                      ____________________________________________________________
consensus             AATTAAATAAAACCGTAGTTGAAACATAACAAATTTTTGTATGACAGATTCATATAGAGG