Contig 009606:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G01Sequence505009606 (4)emb|CDP01093.1|2e-75unnamed protein product [Coffea canephora]757009606 (4)emb|CDP01093.1|3e-65unnamed protein product [Coffea canephora]
JMSF040N23Sequence706009606 (4)emb|CDP01093.1|5e-102unnamed protein product [Coffea canephora]873009606 (4)emb|CDP01093.1|2e-99unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF004G01-                                                     GCACCTCTACACCCAGGA
JMSF040N23-                                    TGGGTGGCTTTCTTTCTGCACCTCTACACCCAGGA
                      ____________________________________________________________
consensus                                      TGGGTGGCTTTCTTTCTGCACCTCTACACCCAGGA
 
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JMFF004G01-           ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
JMSF040N23-           ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
                      ____________________________________________________________
consensus             ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
 
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JMFF004G01-           GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
JMSF040N23-           GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
                      ____________________________________________________________
consensus             GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
 
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JMFF004G01-           ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
JMSF040N23-           ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
rJMSF040N23+                                               CAAGAGATTGACATTGAGGAATG
                      ____________________________________________________________
consensus             ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
 
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JMFF004G01-           GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
JMSF040N23-           GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
rJMSF040N23+          GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
                      ____________________________________________________________
consensus             GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
 
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JMFF004G01-           CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
JMSF040N23-           CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
rJMSF040N23+          CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
                      ____________________________________________________________
consensus             CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
 
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JMFF004G01-           CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
JMSF040N23-           CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
rJMSF040N23+          CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
rJMFF004G01+                                 TGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
                      ____________________________________________________________
consensus             CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
 
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JMFF004G01-           TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
JMSF040N23-           TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
rJMSF040N23+          TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
rJMFF004G01+          TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
                      ____________________________________________________________
consensus             TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
 
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JMFF004G01-           TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
JMSF040N23-           TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
rJMSF040N23+          TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
rJMFF004G01+          TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
                      ____________________________________________________________
consensus             TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
 
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JMSF040N23-           AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
rJMSF040N23+          AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
rJMFF004G01+          AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
                      ____________________________________________________________
consensus             AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
 
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JMSF040N23-           GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
rJMSF040N23+          GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
rJMFF004G01+          GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
                      ____________________________________________________________
consensus             GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
 
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JMSF040N23-           GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
rJMSF040N23+          GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
rJMFF004G01+          GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
                      ____________________________________________________________
consensus             GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
 
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JMSF040N23-           TCTGGACTTGA                                                 
rJMSF040N23+          TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
rJMFF004G01+          TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
                      ____________________________________________________________
consensus             TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
 
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rJMSF040N23+          CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
rJMFF004G01+          CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
                      ____________________________________________________________
consensus             CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
 
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rJMSF040N23+          TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
rJMFF004G01+          TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
                      ____________________________________________________________
consensus             TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
 
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rJMSF040N23+          CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
rJMFF004G01+          CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
                      ____________________________________________________________
consensus             CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
 
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rJMSF040N23+          TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
rJMFF004G01+          TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
                      ____________________________________________________________
consensus             TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
 
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rJMSF040N23+          GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
rJMFF004G01+          GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
                      ____________________________________________________________
consensus             GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
 
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rJMSF040N23+          TCCT                                                        
rJMFF004G01+          TCCTTGATAGAACTAAAACGTGTTGAGTGCAGCATCTATATATTTATATGATCAAGTAAG
                      ____________________________________________________________
consensus             TCCTTGATAGAACTAAAACGTGTTGAGTGCAGCATCTATATATTTATATGATCAAGTAAG