Contig 009606:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G01Sequence505009606 (4)emb|CDP01093.1|2e-75unnamed protein product [Coffea canephora]757009606 (4)emb|CDP01093.1|3e-65unnamed protein product [Coffea canephora]
JMSF040N23Sequence706009606 (4)emb|CDP01093.1|5e-102unnamed protein product [Coffea canephora]873009606 (4)emb|CDP01093.1|2e-99unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF004G01- GCACCTCTACACCCAGGA
JMSF040N23- TGGGTGGCTTTCTTTCTGCACCTCTACACCCAGGA
                      ____________________________________________________________
consensus TGGGTGGCTTTCTTTCTGCACCTCTACACCCAGGA
 
. : . : . : . : . : . :
JMFF004G01- ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
JMSF040N23- ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
                      ____________________________________________________________
consensus ACCAGTGATGGAGGTGGGGAGTACAAGATCCTGGGATGAACTGTTGCCCGATGCACTTGG
 
. : . : . : . : . : . :
JMFF004G01- GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
JMSF040N23- GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
                      ____________________________________________________________
consensus GCTAATCTTCAAGAACCTGCCTCTCCAAGAATTGCTAACAGTAGTGCCCACGGTATGCAA
 
. : . : . : . : . : . :
JMFF004G01- ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
JMSF040N23- ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
rJMSF040N23+ CAAGAGATTGACATTGAGGAATG
                      ____________________________________________________________
consensus ATCGTGGGGCAAAGCCGTGATGGGGCCATACTGCTGGCAAGAGATTGACATTGAGGAATG
 
. : . : . : . : . : . :
JMFF004G01- GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
JMSF040N23- GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
rJMSF040N23+ GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
                      ____________________________________________________________
consensus GAGCAATCGCTCGGAGCCTGGGAGCGTGGAGAGAATGCTCCGAATGCTGATAGCGAGAAG
 
. : . : . : . : . : . :
JMFF004G01- CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
JMSF040N23- CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
rJMSF040N23+ CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
                      ____________________________________________________________
consensus CAATGGTTCCATTCACAAGCTCTGTGTCTCTGGCCTCCAAAACGAACCTGTTTTCTCCCT
 
. : . : . : . : . : . :
JMFF004G01- CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
JMSF040N23- CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
rJMSF040N23+ CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
rJMFF004G01+ TGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
                      ____________________________________________________________
consensus CATTGCAGAAAATGCTCGTTCCTTGAGGATATTGTGCCTGCCCCAGAGCAACATGAGTGA
 
. : . : . : . : . : . :
JMFF004G01- TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
JMSF040N23- TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
rJMSF040N23+ TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
rJMFF004G01+ TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
                      ____________________________________________________________
consensus TTCCATCGTGGAGAAGATTGCTGGGAGCCTCTCGATGATAACGTTCTTGGACTTGAGCTA
 
. : . : . : . : . : . :
JMFF004G01- TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
JMSF040N23- TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
rJMSF040N23+ TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
rJMFF004G01+ TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
                      ____________________________________________________________
consensus TTGTTACAAAATCAGTGCACGTTCCTTGGAGGCTATTGGAAAGAACTGTAAACTGCTGGA
 
. : . : . : . : . : . :
JMSF040N23- AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
rJMSF040N23+ AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
rJMFF004G01+ AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
                      ____________________________________________________________
consensus AGGGTTGCGAAGAAATATGCATCCTCTGATCATGGAGGAAAGGCTCTCACAGGACAACGA
 
. : . : . : . : . : . :
JMSF040N23- GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
rJMSF040N23+ GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
rJMFF004G01+ GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
                      ____________________________________________________________
consensus GGAGGCTCATGCCATAGCCACTACAATGCCCAACCTCAAGCGTCTCGAGACAGCTTACCT
 
. : . : . : . : . : . :
JMSF040N23- GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
rJMSF040N23+ GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
rJMFF004G01+ GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
                      ____________________________________________________________
consensus GCGGTACATTAACACAATAGGCGCTCTAGAGATCATCCACAGCTGCCCTCAGCTCGAGTA
 
. : . : . : . : . : . :
JMSF040N23- TCTGGACTTGA
rJMSF040N23+ TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
rJMFF004G01+ TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
                      ____________________________________________________________
consensus TCTGGACTTGAGGGGGTGCTGGCAAGTGAAGCTCGACGGGGAGTACCTGAAAGACAAGTT
 
. : . : . : . : . : . :
rJMSF040N23+ CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
rJMFF004G01+ CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
                      ____________________________________________________________
consensus CCCGAAGTTGAAAGTTTTGGGACCTTACGTTGTGGATCGATACGAGAGGAACAATGACTA
 
. : . : . : . : . : . :
rJMSF040N23+ TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
rJMFF004G01+ TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
                      ____________________________________________________________
consensus TGAAGATTGGTCGGATTTTTCAGACTCTTTGTATGATTATGAGAGCTCGGATGATGAGAA
 
. : . : . : . : . : . :
rJMSF040N23+ CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
rJMFF004G01+ CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
                      ____________________________________________________________
consensus CAGGTTCGGTGAGCTGGAATTCAGATTCTATCAGCAGTTCAACGAGGATGCTACCAATGG
 
. : . : . : . : . : . :
rJMSF040N23+ TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
rJMFF004G01+ TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
                      ____________________________________________________________
consensus TTGGCCTCCATCTCCTTAACCATAAACCATTATTGTCTTTTGGCACAAGAACTGTGTTTT
 
. : . : . : . : . : . :
rJMSF040N23+ GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
rJMFF004G01+ GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
                      ____________________________________________________________
consensus GCCATTCAATGTGCTTGTTGATGTATATGTTTTCCTCCTTTGTTATCTTTAGATATATGC
 
. : . : . : . : . : . :
rJMSF040N23+ TCCT
rJMFF004G01+ TCCTTGATAGAACTAAAACGTGTTGAGTGCAGCATCTATATATTTATATGATCAAGTAAG
                      ____________________________________________________________
consensus TCCTTGATAGAACTAAAACGTGTTGAGTGCAGCATCTATATATTTATATGATCAAGTAAG