Contig 009601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003D07Sequence562003053 (6)ref|XP_004236872.1|135PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]342009601 (3)
JMSF016H10Sequence614003053 (6)ref|XP_004236872.1|140PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]287009601 (3)
JMSF041L24Sequence688021149ref|XP_004236872.1|79.3PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum]187009601 (3)

Alignment

This contig is upended


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rJMSF016H10+                                                   CGNGGAAGNGAAGAAGGCG
                      ____________________________________________________________
consensus                                                      CGNGGAAGNGAAGAAGGCG
 
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rJMSF016H10+          GTTNTCNNGGNTTAACCTTNTGTTTACNTGAATNTNGTANGTCNGCCNNAATTNTTTTTG
                      ____________________________________________________________
consensus             GTTNTCNNGGNTTAACCTTNTGTTTACNTGAATNTNGTANGTCNGCCNNAATTNTTTTTG
 
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rJMSF016H10+          CTTTTNTCCGATCCGGGGNTATAGGNCTNGNCGNTGTCTCTTTTTTTTTTTTTCTTTCTG
rJMSF041L24+                                                      TTTTTTTTTTTTTCTG
rJMFF003D07+                                                  TTTTTTTTTTTTTTTTTCTG
                      ____________________________________________________________
consensus             CTTTTNTCCGATCCGGGGNTATAGGNCTNGNCGNTGTCTCTTTTTTTTTTTTTTTTTCTG
 
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rJMSF016H10+          GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
rJMSF041L24+          GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
rJMFF003D07+          GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
                      ____________________________________________________________
consensus             GGTCTCGACGGTGTCTTTGTGTTTGCTTCTTTGCAATCTTCCACAGCTCAGTCTGTATGG
 
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rJMSF016H10+          ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
rJMSF041L24+          ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTAT      
rJMFF003D07+          ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
                      ____________________________________________________________
consensus             ACTTATGGTCTCCTGGTGTCCTCAACCTTTTGGTTCAATGTCTTTGTTTGTTATTAGAAT
 
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rJMSF016H10+          TATCAAGTGGAAGTATATGCACTGAATT                                
rJMFF003D07+          TATCAAGTGGAAGTATATGCACTGAATTTATACCATGTCAAAACAAGTTCTGCTTAGCTA
                      ____________________________________________________________
consensus             TATCAAGTGGAAGTATATGCACTGAATTTATACCATGTCAAAACAAGTTCTGCTTAGCTA
 
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rJMFF003D07+          CAGCCAATTGTTATTGTCAGTGGTCCAAGGACCTTGCATTTGCATTGATGCATTCAGTTA
                      ____________________________________________________________
consensus             CAGCCAATTGTTATTGTCAGTGGTCCAAGGACCTTGCATTTGCATTGATGCATTCAGTTA