Contig 009598:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M03Sequence746009598 (6)ref|XP_002284677.1|173PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635
JMFN011L04Sequence617009598 (6)ref|XP_002284677.1|152PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635
JMSF033J08Sequence689009598 (6)ref|XP_002284677.1|108PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635679009598 (6)ref|XP_002284677.1|173PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635
JMSF033K08Sequence615009598 (6)ref|XP_002284677.1|87.4PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635679009598 (6)ref|XP_002284677.1|173PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] ref|XP_01065635

Alignment

This contig is upended


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JMSF033K08-                                                         GAGTGGCTCCTCTC
JMSF033J08-                                                         GAGTGGCTCCTCTC
                      ____________________________________________________________
consensus                                                           GAGTGGCTCCTCTC
 
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JMSF033K08-           CACTATTCCACTTCACATCTCCCATAGATATGATGTTTATTAACCTCTGATCCCCCATTG
JMSF033J08-           CACTATTCCACTTCACATCTCCCATAGATATGATGTTTATTAACCTCTGATCCCCCATTG
                      ____________________________________________________________
consensus             CACTATTCCACTTCACATCTCCCATAGATATGATGTTTATTAACCTCTGATCCCCCATTG
 
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JMSF033K08-           TCGCATGATTCACAGAACCCTGTCATCAATTTCATCATACATATATATATGCACACAAAT
JMSF033J08-           TCGCATGATTCACAGAACCCTGTCATCAATTTCATCATACATATATATATGCACACAAAT
JMFN011L04-                   TTCACAGAACCCTGTCATCAATTTCATCATACATATATATATGCACACAAAT
                      ____________________________________________________________
consensus             TCGCATGATTCACAGAACCCTGTCATCAATTTCATCATACATATATATATGCACACAAAT
 
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JMSF033K08-           GGGTGTTTATCATTCTTGATTCCTTTCCCACTTTTCCCTCTCCCAATGCAATAATAAAGT
JMSF033J08-           GGGTGTTTATCATTCTTGATTCCTTTCCCACTTTTCCCTCTCCCAATGCAATAATAAAGT
JMFN011L04-           GGGTGTTTATCATTCTTGATTCCTTTCCCACTTTTCCCTCTCCCAATGCAATAATAAAGT
                      ____________________________________________________________
consensus             GGGTGTTTATCATTCTTGATTCCTTTCCCACTTTTCCCTCTCCCAATGCAATAATAAAGT
 
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JMSF033K08-           TGGGCCTTTCCTTTCACTCCACACTGCATCTTCTTCTTCTTCTTCTTCCTCAAAGTGTGT
JMSF033J08-           TGGGCCTTTCCTTTCACTCCACACTGCATCTTCTTCTTCTTCTTCTTCCTCAAAGTGTGT
JMFN011L04-           TGGGCCTTTCCTTTCACTCCACACTGCATCTTCTTCTTCTTCTTCTTCCTCAAAGTGTGT
rJMFF001M03+                                                         CCTCAAAGTGTGT
                      ____________________________________________________________
consensus             TGGGCCTTTCCTTTCACTCCACACTGCATCTTCTTCTTCTTCTTCTTCCTCAAAGTGTGT
 
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JMSF033K08-           GTGTTATCTTCTTGAATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
JMSF033J08-           GTGTTATCTTCTTGAATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
JMFN011L04-           GTGTTATCTTCTTGAATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
rJMSF033J08+                        AATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
rJMSF033K08+                        AATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
rJMFF001M03+          GTGTTATCTTCTTGAATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
                      ____________________________________________________________
consensus             GTGTTATCTTCTTGAATGAATTATTGAATACTGCTGCATTATTGTATTGGTAGTGTTTTT
 
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JMSF033K08-           GAATGGGGAAGTTGAGGTTTGGGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
JMSF033J08-           GAATGGGGAAGTTGAGGTTTGGGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
JMFN011L04-           GAATGGGGAAGTTGAGGTTT-GGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
rJMSF033J08+          GAATGGGGAAGTTGAGGTTT-GGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
rJMSF033K08+          GAATGGGGAAGTTGAGGTTT-GGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
rJMFF001M03+          GAATGGGGAAGTTGAGGTTT-GGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
                      ____________________________________________________________
consensus             GAATGGGGAAGTTGAGGTTT-GGTAGGGTGTTTGATAGTCTGTGTCTTAGTTCTGGGTCT
 
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JMSF033K08-           TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
JMSF033J08-           TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
JMFN011L04-           TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
rJMSF033J08+          TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
rJMSF033K08+          TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
rJMFF001M03+          TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
                      ____________________________________________________________
consensus             TCTTGTTTCTGCGGCATCAACAGCTTTGGGAGTGGTCAAGATGGTGATCACTTTGAGAAA
 
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JMSF033K08-           AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCANCAGGCTGTTAGG
JMSF033J08-           AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCAGCAGGCTGTTAGG
JMFN011L04-           AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGAGCATCAGCAGGCTGTTAGG
rJMSF033J08+          AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCAGCAGGCTGTTAGG
rJMSF033K08+          AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCAGCAGGCTGTTAGG
rJMFF001M03+          AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCAGCAGGCTGTTAGG
                      ____________________________________________________________
consensus             AGGCCACTCATGTTGGGTGACCACCCAAAAGATGGGCATGGGCATCAGCAGGCTGTTAGG
 
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JMSF033K08-           TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAANATGGTG
JMSF033J08-           TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAANATGGTG
JMFN011L04-           TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAAGATGGTG
rJMSF033J08+          TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAAGATGGTG
rJMSF033K08+          TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAAGATGGTG
rJMFF001M03+          TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAAGATGGTG
                      ____________________________________________________________
consensus             TTGAAGGATGTCATTTCTGGACCTCCCACCTTGGCCTTTCAACTCAAGCCTAAGATGGTG
 
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JMSF033K08-           GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGANAAACACATCTCC
JMSF033J08-           GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
JMFN011L04-           GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
rJMSF033J08+          GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
rJMSF033K08+          GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
rJMFF001M03+          GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
                      ____________________________________________________________
consensus             GTTCTAAGGGTCTCCATGCATTGCTATGGTTGTGCCAAGAAAGTGGAGAAACACATCTCC
 
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JMSF033K08-           A                                                           
JMSF033J08-           NAGATGGAAGGAGTGACTTCCTATC-AGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
JMFN011L04-           AAGATGGAAGGAGTGACTTCCTATCAAGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
rJMSF033J08+          AAGATGGAAGGAGTGACTTCCTATCAAGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
rJMSF033K08+          AAGATGGAAGGAGTGACTTCCTATCAAGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
rJMFF001M03+          AAGATGGAAGGAGTGACTTCCTATCAAGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
                      ____________________________________________________________
consensus             AAGATGGAAGGAGTGACTTCCTATCAAGTGGACTTGGAAACCAAAATGGTGGTTGTTGTG
 
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JMSF033J08-           GGAGACATTGTTCCTT                                            
JMFN011L04-           GGAGACATTGTTCCTTTTGAAGTGTT                                  
rJMSF033J08+          GGAGACATTGTTCCTTTTGAAGTGTTGGAGAGTGTTTCCAAAGTCAAAAATGCAGAGCTT
rJMSF033K08+          GGAGACATTGTTCCTTTTGAAGTGTTGGAGAGTGTTTCCAAAGTCAAAAATGCAGAGCTT
rJMFF001M03+          GGAGACATTGTTCCTTTTGAAGTGTTGGAGAGTGTTTCCAAAGTCAAAAATGCAGAGCTT
                      ____________________________________________________________
consensus             GGAGACATTGTTCCTTTTGAAGTGTTGGAGAGTGTTTCCAAAGTCAAAAATGCAGAGCTT
 
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rJMSF033J08+          TGGACTATCACTACTCAAGAAAATATGAAAGTTATTATATGAACTGAAGTTATGATATAT
rJMSF033K08+          TGGACTATCACTACTCAAGAAAATATGAAAGTTATTATATGAACTGAAGTTATGATATAT
rJMFF001M03+          TGGACTATCACTACTCAAGAAAATATGAAAGTTATTATATGAACTGAAGTTATGATATAT
                      ____________________________________________________________
consensus             TGGACTATCACTACTCAAGAAAATATGAAAGTTATTATATGAACTGAAGTTATGATATAT
 
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rJMSF033J08+          CAACATAATCAAGTGATAAGAGAGGACATCGGCTATCTAGGATATTAAGAATACGGGTGT
rJMSF033K08+          CAACATAATCAAGTGATAAGAGAGGACATCGGCTATCTAGGATATTAAGAATACGGGTGT
rJMFF001M03+          CAACATAATCAAGTGATAAGAGAGGACATCGGCTATCTAGGATATTAAGAATACGGGTGT
                      ____________________________________________________________
consensus             CAACATAATCAAGTGATAAGAGAGGACATCGGCTATCTAGGATATTAAGAATACGGGTGT
 
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rJMSF033J08+          TATGGGATATATTTTAATATATATGGAAACCAATTAAGAATAGGGCATACCTACATAGAT
rJMSF033K08+          TATGGGATATATTTTAATATATATGGAAACCAATTAAGAATAGGGCATACCTACATAGAT
rJMFF001M03+          TATGGGATATATTTTAATATATATGGAAACCAATTAAGAATAGGGCATACCTACATAGAT
                      ____________________________________________________________
consensus             TATGGGATATATTTTAATATATATGGAAACCAATTAAGAATAGGGCATACCTACATAGAT
 
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rJMSF033J08+          GATTTTTGTGCTATATCTATGAAATTTAGTATT                           
rJMSF033K08+          GATTTTTGTGCTATATCTATGAAATTTAGTATT                           
rJMFF001M03+          GATTTTTGTGCTATATCTATGAAATTTAGTATTTGTAAATCCCAGTGATCGATTATATCA
                      ____________________________________________________________
consensus             GATTTTTGTGCTATATCTATGAAATTTAGTATTTGTAAATCCCAGTGATCGATTATATCA