Contig 009596:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+                                                      CTTCATGGTGGGGTTT
                      ____________________________________________________________
consensus                                                         CTTCATGGTGGGGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          GCTCCGCTCACCTCACGTGGATCTCAGCAATACCGAGCCCTTACAGTCCCTGAGCTAACT
                      ____________________________________________________________
consensus             GCTCCGCTCACCTCACGTGGATCTCAGCAATACCGAGCCCTTACAGTCCCTGAGCTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          CAACAAATGTGGGATTCCAAGAACATGATGTGCGCTGCTGATCCACGGCATGGGCGCTAT
rJMFF001I08+             CAAATGTGGGATTCCAAGAACATGATGTGCGCTGCTGATCCACGGCATGGGCGCTAT
                      ____________________________________________________________
consensus             CAACAAATGTGGGATTCCAAGAACATGATGTGCGCTGCTGATCCACGGCATGGGCGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          CTCACAGCTTCAGCCATGTTCAGGGGCAAAATGAGCACCAAGGAAGTGGATGAACAGATG
rJMFF001I08+          CTCACAGCTTCAGCCATGTTCAGGGGCAAAATGAGCACCAAGGAAGTGGATGAACAGATG
                      ____________________________________________________________
consensus             CTCACAGCTTCAGCCATGTTCAGGGGCAAAATGAGCACCAAGGAAGTGGATGAACAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          ATCAACGTGCAAAACAAGAATTCGTCCTACTTTGTGGAGTGGATTCCAAACAACGTGAAG
rJMFF001I08+          ATCAACGTGCAAAACAAGAATTCGTCCTACTTTGTGGAGTGGATTCCAAACAACGTGAAG
                      ____________________________________________________________
consensus             ATCAACGTGCAAAACAAGAATTCGTCCTACTTTGTGGAGTGGATTCCAAACAACGTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          TCAAGCGTGTGCGATATCCCACCTAGGGGGCTGTCAATGTCATCCACCTTCGTCGGGAAC
rJMFF001I08+          TCAAGCGTGTGCGATATCCCACCTAGGGGGCTGTCAATGTCATCCACCTTCGTCGGGAAC
                      ____________________________________________________________
consensus             TCAAGCGTGTGCGATATCCCACCTAGGGGGCTGTCAATGTCATCCACCTTCGTCGGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          TCCACACCCATTCAGGAGATGTTCAGGAGAGTGAGCGAGCAGTTCACTGCCATGTTCAGG
rJMFF001I08+          TCCACACCCATTCAGGAGATGTTCAGGAGAGTGAGCGAGCAGTTCACTGCCATGTTCAGG
                      ____________________________________________________________
consensus             TCCACACCCATTCAGGAGATGTTCAGGAGAGTGAGCGAGCAGTTCACTGCCATGTTCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          CGAAAGGCTTTCTTGCATTGGTACACCGGAGAAGGAATGGACGAGATGGAGTTCACAGAA
rJMFF001I08+          CGAAAGGCTTTCTTGCATTGGTACACCGGAGAAGGAATGGACGAGATGGAGTTCACAGAA
                      ____________________________________________________________
consensus             CGAAAGGCTTTCTTGCATTGGTACACCGGAGAAGGAATGGACGAGATGGAGTTCACAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          GCTGAGAGCAACATGAACGACCTGGTTTCCGAGTACCAGCAGTACCAGGATGCCACTGCT
rJMFF001I08+          GCTGAGAGCAACATGAACGACCTGGTTTCCGAGTACCAGCAGTACCAGGATGCCACTGCT
                      ____________________________________________________________
consensus             GCTGAGAGCAACATGAACGACCTGGTTTCCGAGTACCAGCAGTACCAGGATGCCACTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF028K20+          GATGATGAAGGCGAGTACGAGGAAGAAGA                               
rJMFF001I08+          GATGATGAAGGCGAGTACGAGGAAGAAGAAGAGGGGGTATTGGAGCATGATGACTAGAAG
                      ____________________________________________________________
consensus             GATGATGAAGGCGAGTACGAGGAAGAAGAAGAGGGGGTATTGGAGCATGATGACTAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I08+          GACAAGTTATGCCATTTCATATAGCTATTTGGTGTGTCTTGAATCTTGATCTGAGCCTGA
                      ____________________________________________________________
consensus             GACAAGTTATGCCATTTCATATAGCTATTTGGTGTGTCTTGAATCTTGATCTGAGCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I08+          AGACTCTGTTCGTTTGTGTATGTTACAGTTGTTTGGTTCGGGGTGTGAGTAAGAAGTTGT
                      ____________________________________________________________
consensus             AGACTCTGTTCGTTTGTGTATGTTACAGTTGTTTGGTTCGGGGTGTGAGTAAGAAGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF001I08+          TCATGTAATTCACTTTGAGATTGAGATGCAATAAATTAGGTGTCCATGCCAACCCGGCAA
                      ____________________________________________________________
consensus             TCATGTAATTCACTTTGAGATTGAGATGCAATAAATTAGGTGTCCATGCCAACCCGGCAA