Contig 009594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E08Sequence709009594 (6)ref|XP_009617474.1|5e-69PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]
JMFF013E17Sequence549009594 (6)ref|XP_009617474.1|2e-44PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]745009594 (6)ref|XP_009617474.1|1e-70PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]
JMSF025F18Sequence707009594 (6)ref|XP_009617474.1|5e-59PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]
JMSF045K13Sequence768009594 (6)ref|XP_009617474.1|7e-70PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]783009594 (6)ref|XP_009617474.1|9e-78PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025F18- TCCGCGAAGTCTGAACACCTTCACCA
JMFF013E17- GTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
JMSF045K13- GGTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
                      ____________________________________________________________
consensus GGTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
 
. : . : . : . : . : . :
JMSF025F18- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCCTTCTGCTCCGGCAGAAAGAATGGCAG
JMFF013E17- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
JMSF045K13- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
rJMSF045K13+ GGCAGAAAGAATGGCAG
                      ____________________________________________________________
consensus AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
 
. : . : . : . : . : . :
JMSF025F18- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
JMFF013E17- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
JMSF045K13- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
rJMSF045K13+ CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
                      ____________________________________________________________
consensus CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
 
. : . : . : . : . : . :
JMSF025F18- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
JMFF013E17- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
JMSF045K13- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
rJMSF045K13+ CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
rJMFF013E17+ GGATATCAGTGGCATTNTAGTGCCATCNTCT
                      ____________________________________________________________
consensus CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
 
. : . : . : . : . : . :
JMSF025F18- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
JMFF013E17- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
JMSF045K13- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMSF045K13+ CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMFF013E17+ NTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMFF001E08+ CCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
                      ____________________________________________________________
consensus CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
 
. : . : . : . : . : . :
JMSF025F18- GATGCAGCGCCAGAAAGAGGGTGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
JMFF013E17- GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
JMSF045K13- GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMSF045K13+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMFF013E17+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMFF001E08+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
                      ____________________________________________________________
consensus GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
 
. : . : . : . : . : . :
JMSF025F18- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
JMFF013E17- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
JMSF045K13- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMSF045K13+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMFF013E17+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMFF001E08+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
                      ____________________________________________________________
consensus CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
 
. : . : . : . : . : . :
JMSF025F18- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
JMFF013E17- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
JMSF045K13- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMSF045K13+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMFF013E17+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMFF001E08+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
                      ____________________________________________________________
consensus TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
 
. : . : . : . : . : . :
JMSF025F18- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
JMFF013E17- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
JMSF045K13- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMSF045K13+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMFF013E17+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMFF001E08+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
                      ____________________________________________________________
consensus GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
 
. : . : . : . : . : . :
JMSF025F18- AGGGGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
JMFF013E17- AGGAGCAGGTTAATGAGT
JMSF045K13- AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMSF045K13+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMFF013E17+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMFF001E08+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
                      ____________________________________________________________
consensus AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
 
. : . : . : . : . : . :
JMSF025F18- TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
JMSF045K13- TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMSF045K13+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMFF013E17+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMFF001E08+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
                      ____________________________________________________________
consensus TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
 
. : . : . : . : . : . :
JMSF025F18- TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
JMSF045K13- TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMSF045K13+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMFF013E17+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMFF001E08+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
                      ____________________________________________________________
consensus TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
 
. : . : . : . : . : . :
JMSF025F18- GCAAGCTGGTGCCTTTCGT
JMSF045K13- GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCT
rJMSF045K13+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
rJMFF013E17+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
rJMFF001E08+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
                      ____________________________________________________________
consensus GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
 
. : . : . : . : . : . :
rJMSF045K13+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
rJMFF013E17+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
rJMFF001E08+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
                      ____________________________________________________________
consensus CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
 
. : . : . : . : . : . :
rJMSF045K13+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTAC
rJMFF013E17+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
rJMFF001E08+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
                      ____________________________________________________________
consensus TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
 
. : . : . : . : . : . :
rJMFF013E17+ CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATA
rJMFF001E08+ CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATATGAAAT
                      ____________________________________________________________
consensus CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATATGAAAT