| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001E08 | Sequence | 709 | 009594 (6) | ref|XP_009617474.1| | 5e-69 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] | |||||
| JMFF013E17 | Sequence | 549 | 009594 (6) | ref|XP_009617474.1| | 2e-44 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] | 745 | 009594 (6) | ref|XP_009617474.1| | 1e-70 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] |
| JMSF025F18 | Sequence | 707 | 009594 (6) | ref|XP_009617474.1| | 5e-59 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] | |||||
| JMSF045K13 | Sequence | 768 | 009594 (6) | ref|XP_009617474.1| | 7e-70 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] | 783 | 009594 (6) | ref|XP_009617474.1| | 9e-78 | PREDICTED: transcription factor ILR3-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF025F18- TCCGCGAAGTCTGAACACCTTCACCA
JMFF013E17- GTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
JMSF045K13- GGTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
____________________________________________________________
consensus GGTCGATTAATAATTTTCTTTTCTTGTCCGCGAAGTCTGAACACCTTCACCA
. : . : . : . : . : . :
JMSF025F18- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCCTTCTGCTCCGGCAGAAAGAATGGCAG
JMFF013E17- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
JMSF045K13- AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
rJMSF045K13+ GGCAGAAAGAATGGCAG
____________________________________________________________
consensus AAATTCCCGGCGGGCTACTCTCGGCGGCGCTCCTTTCTGCTCCGGCAGAAAGAATGGCAG
. : . : . : . : . : . :
JMSF025F18- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
JMFF013E17- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
JMSF045K13- CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
rJMSF045K13+ CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
____________________________________________________________
consensus CTCCGGAGGTGGATGGCTCCAACTGGCTCCTGGATCTTGGGTTCGAAGACATTCCCTTAC
. : . : . : . : . : . :
JMSF025F18- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
JMFF013E17- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
JMSF045K13- CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
rJMSF045K13+ CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
rJMFF013E17+ GGATATCAGTGGCATTNTAGTGCCATCNTCT
____________________________________________________________
consensus CTGGCGGGAAATTCCCTCCTCTTGAGCCGGGATATCAGTGGCATTCTAGTGCCATCCTCT
. : . : . : . : . : . :
JMSF025F18- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
JMFF013E17- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
JMSF045K13- CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMSF045K13+ CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMFF013E17+ NTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
rJMFF001E08+ CCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
____________________________________________________________
consensus CTCCAGCCCCTCCCAGCATTCGACAAGATGAGTCATATGTAAAATTTGATGTTTCAAACG
. : . : . : . : . : . :
JMSF025F18- GATGCAGCGCCAGAAAGAGGGTGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
JMFF013E17- GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
JMSF045K13- GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMSF045K13+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMFF013E17+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
rJMFF001E08+ GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
____________________________________________________________
consensus GATGCAGCGCCAGAAAGAGGATGAAATCTGGGGCTTGCAGTGGAGCTGCTGATTCTAAAG
. : . : . : . : . : . :
JMSF025F18- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
JMFF013E17- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
JMSF045K13- CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMSF045K13+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMFF013E17+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
rJMFF001E08+ CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
____________________________________________________________
consensus CACAGAGGGAGAAAATGCGAAGATATAGGCTGAATGACCGGTTCCAAGAATTGAGTTGTG
. : . : . : . : . : . :
JMSF025F18- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
JMFF013E17- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
JMSF045K13- TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMSF045K13+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMFF013E17+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
rJMFF001E08+ TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
____________________________________________________________
consensus TGATGGACCCTGGAAAGCCACCCAAAATGGATAAATCGGCCATATTGAGCGATGCTGTTA
. : . : . : . : . : . :
JMSF025F18- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
JMFF013E17- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
JMSF045K13- GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMSF045K13+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMFF013E17+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
rJMFF001E08+ GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
____________________________________________________________
consensus GAATGGTACTTCAGCTAAGGGATGAAGCTCAGAAGCTGAAAGAATCGTTTGAGGATTTAC
. : . : . : . : . : . :
JMSF025F18- AGGGGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
JMFF013E17- AGGAGCAGGTTAATGAGT
JMSF045K13- AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMSF045K13+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMFF013E17+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
rJMFF001E08+ AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
____________________________________________________________
consensus AGGAGCAGGTTAATGAGTTAAAGGCCGAGAAAAATGAACTTAAGGACGAGAAGCAAAAGC
. : . : . : . : . : . :
JMSF025F18- TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
JMSF045K13- TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMSF045K13+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMFF013E17+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
rJMFF001E08+ TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
____________________________________________________________
consensus TAAAAGAAGAGAAGGACAAACTCGAGCTGCAACTGAAAGCTCTCAACTCTCGTCCTGGGT
. : . : . : . : . : . :
JMSF025F18- TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
JMSF045K13- TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMSF045K13+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMFF013E17+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
rJMFF001E08+ TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
____________________________________________________________
consensus TTTTACCTCACCCGCCTGCAACTGCTGTTCCATTCCCCACGCCTCATCATCTTGTAGGCG
. : . : . : . : . : . :
JMSF025F18- GCAAGCTGGTGCCTTTCGT
JMSF045K13- GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCT
rJMSF045K13+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
rJMFF013E17+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
rJMFF001E08+ GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
____________________________________________________________
consensus GCAAGCTGGTGCCTTTCGTTGGCTACCCTGGAATCCCGATGTGGCAGTTTGCAGCTCCTG
. : . : . : . : . : . :
rJMSF045K13+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
rJMFF013E17+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
rJMFF001E08+ CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
____________________________________________________________
consensus CTGTTATTGACACACCAGAAGACCATTCTCTTCCCCCAGTTGCTTAAGTTTTATTCTGTT
. : . : . : . : . : . :
rJMSF045K13+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTAC
rJMFF013E17+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
rJMFF001E08+ TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
____________________________________________________________
consensus TCTTGTTTTTCGAATTTTGTGTTTCTTTTAGGTACAAGGAAACTGGCACTTCTTGTGAAC
. : . : . : . : . : . :
rJMFF013E17+ CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATA
rJMFF001E08+ CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATATGAAAT
____________________________________________________________
consensus CTAGTTACATAGAGTATCTAGTTATAACTTGATTCTCAAGTTTTGATCAAAATATGAAAT