| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006O12 | Sequence | 298 | 009591 (4) | gb|KGN58257.1| | 4e-43 | hypothetical protein Csa_3G599980 [Cucumis sativus] | 363 | 022445 | ref|XP_009797664.1| | 49.3 | PREDICTED: uncharacterized protein LOC104244060 [Nicotiana sylvestris] |
| JMSF020G09 | Sequence | 682 | 009591 (4) | ref|XP_009609909.1| | 3e-121 | PREDICTED: uncharacterized protein LOC104103691 isoform X2 [Nicotiana tomentosi | |||||
| JMSF040H23 | Sequence | 665 | 009591 (4) | ref|XP_009609909.1| | 6e-119 | PREDICTED: uncharacterized protein LOC104103691 isoform X2 [Nicotiana tomentosi | 123 | 018298 | |||
| JMSF053E21 | Sequence | 653 | 009591 (4) | ref|XP_009609909.1| | 2e-91 | PREDICTED: uncharacterized protein LOC104103691 isoform X2 [Nicotiana tomentosi | 166 | 017291 | |||
This contig is upended
. : . : . : . : . : . :
JMSF040H23+ TGTTTTTTTCAAAAGCCAACCCCA
JMSF020G09+ CAATGCATCTAACCTTGTTTTTTTCAAAAGCCAACCCCA
____________________________________________________________
consensus CAATGCATCTAACCTTGTTTTTTTCAAAAGCCAACCCCA
. : . : . : . : . : . :
JMSF040H23+ CAAGCGTGCAATCAGCATGTCTACTTTTTCCATGAAAAAGTAATCAGTTGTCCTGTCAAT
JMSF020G09+ CAAGCGTGCAATCAGCATGTCTACTTTTTCCATGAAAAAGTAATCAGTTGTCCTGTCAAT
____________________________________________________________
consensus CAAGCGTGCAATCAGCATGTCTACTTTTTCCATGAAAAAGTAATCAGTTGTCCTGTCAAT
. : . : . : . : . : . :
JMSF040H23+ ACCAATTCCTCGTCGGAAGATTACATACTTATCAGCAAATTCAGGCAGATTTTCCGTAGG
JMSF020G09+ ACCAATTCCTCGTCGGAAGATTACATACTTATCAGCAAATTCAGGCAGATTTTCCGTAGG
JMSF053E21+ CTTATCAGCAAATTCAGGCAGATTTTCCGTAGG
____________________________________________________________
consensus ACCAATTCCTCGTCGGAAGATTACATACTTATCAGCAAATTCAGGCAGATTTTCCGTAGG
. : . : . : . : . : . :
JMSF040H23+ ATGCTCTGCAAAGTACTTCTTCAAAATTTTTTTGTTAAGCTTAGATTCATCAACTGTGAT
JMSF020G09+ ATGCTCTGCAAAGTACTTCTTCAAAATTTTTTTGTTAAGCTTAGATTCATCAACTGTGAT
JMSF053E21+ ATGCTCTGCAAAGTACTTCTTCAAAATTTTTTTGTTAAGCTTAGATTCATCAACTGTGAT
____________________________________________________________
consensus ATGCTCTGCAAAGTACTTCTTCAAAATTTTTTTGTTAAGCTTAGATTCATCAACTGTGAT
. : . : . : . : . : . :
JMSF040H23+ GGGAAGATTTAGAAGATACTGCCCAGACTGTGCAACCTCAATCTCCTCATCAGTTGCTAT
JMSF020G09+ GGGAAGATTTAGAAGATACTGCCCAGACTGTGCAACCTCAATCTCCTCATCAGTTGCTAT
JMSF053E21+ GGGAAGATTTAGAAGATACTGCCCAGACTGTGCAACCTCAATCTCCTCATCAGTTGCTAT
____________________________________________________________
consensus GGGAAGATTTAGAAGATACTGCCCAGACTGTGCAACCTCAATCTCCTCATCAGTTGCTAT
. : . : . : . : . : . :
JMSF040H23+ TTTAAAGTTGCTTTTATCCATTATCTGAAATAAGTAAGTCAAGAAATTCTGTTCAAGAAT
JMSF020G09+ TTTAAAGTTGCTTTTATCCATTATCTGAAATAAGTAAGTCAAGAAATTCTGTTCAAGAAT
JMSF053E21+ TTTAAAGTTGCTTTTATCCATTATCTGAAATAAGTAAGTCAAGAAATTCTGTTCAAGAAT
____________________________________________________________
consensus TTTAAAGTTGCTTTTATCCATTATCTGAAATAAGTAAGTCAAGAAATTCTGTTCAAGAAT
. : . : . : . : . : . :
JMSF040H23+ GTCAACTTCATCTGAACTCAAGTTCTGCTGTTCCAGTTTTTGCGCGCCATACACAGGATC
JMSF006O12+ CTGTTCCAGGTTTTGCGCGCCATACACAGGATC
JMSF020G09+ GTCAACTTCATCTGAACTCAAGTTCTGCTGTTCCAGTTTTTGCGCGCCATACACAGGATC
JMSF053E21+ GTCAACTTCATCTGAACTCAAGTTCTGCTGTTCCAGTTTTTGCGCGCCATACACAGGATC
____________________________________________________________
consensus GTCAACTTCATCTGAACTCAAGTTCTGCTGTTCCAGTTTTTGCGCGCCATACACAGGATC
. : . : . : . : . : . :
JMSF040H23+ AAATAAGGAGTAGAGTTGCATGAGATCCTCAAACTGCAAGAGATACCAGGCACGAATTGT
JMSF006O12+ AAATAAGGAGTAGAGTTGCATGAGATCCTCAAACTGCAAGAGATACCAGGCACGAATTGT
JMSF020G09+ AAATAAGGAGTAGAGTTGCATGAGATCCTCAAACTGCAAGAGATACCAGGCACGAATTGT
JMSF053E21+ AAATAAGGAGTAGAGTTGCATGAGATCCTCAAACTGCAAGAGATACCAGGCACGAATTGT
____________________________________________________________
consensus AAATAAGGAGTAGAGTTGCATGAGATCCTCAAACTGCAAGAGATACCAGGCACGAATTGT
. : . : . : . : . : . :
JMSF040H23+ GTACTCAACCCTTTTGCAGAGCTTCAAAAATTCAGCACGGTCAGAAGAATGTTCAATGAG
JMSF006O12+ GTACTCAACCCTTTTGCAGAGCTTCAAAAATTCAGCACGGTCAGAAGAATGTTCAATGAG
JMSF020G09+ GTACTCAACCCTTTTGCAGAGCTTCAAAAATTCAGCACGGTCAGAAGAATGTTCAATGAG
JMSF053E21+ GTACTCAACCCTTTTGCAGAGCTTCAAAAATTCAGCACGGTCAGAAGAATGTTCAATGAG
____________________________________________________________
consensus GTACTCAACCCTTTTGCAGAGCTTCAAAAATTCAGCACGGTCAGAAGAATGTTCAATGAG
. : . : . : . : . : . :
JMSF040H23+ ATCGGCAAGAGTCATGATAAGCTTAGGCTTGAGGATTGGAATTACAGACTCGCGCTCCAA
JMSF006O12+ ATCGGCAAGAGTCATGATAAGCTTAGGCTTGAGGATTGGAATTACAGACTCGCGCTCCAA
JMSF020G09+ ATCGGCAAGAGTCATGATAAGCTTAGGCTTGAGGATTGGAATTACAGACTCGCGCTCCAA
JMSF053E21+ ATCGGCAAGAGTCATGATAAGCTTAGGCTTGAGGATTGGAATTACAGACTCGCGCTCCAA
____________________________________________________________
consensus ATCGGCAAGAGTCATGATAAGCTTAGGCTTGAGGATTGGAATTACAGACTCGCGCTCCAA
. : . : . : . : . : . :
JMSF040H23+ TCGGATCACATCTTTGCCATTCTTGTTCTCCGTCATAGCCATTGGTTTCGACTGTTTTTT
JMSF006O12+ TCGGATCACATCTTTGCCATTCTTGTTCTCCGTCATAGCCATTGGTTTCGACTGTTTTTT
JMSF020G09+ TCGGATCACATCTTTGCCATTCTTGTTCTCCGTCATAGCCATTGGTTTCGACTGTTTTTT
JMSF053E21+ TCGGATCACATCTTTGCCATTCTTGTTCTCCGTCATAGCCATTGGTTTCGACTGTTTTTT
____________________________________________________________
consensus TCGGATCACATCTTTGCCATTCTTGTTCTCCGTCATAGCCATTGGTTTCGACTGTTTTTT
. : . : . : . : . : . :
JMSF040H23+ AAGTGAAGCCGGCCGACAAAACCTGGGGAGCCACAACGAC
JMSF006O12+ AAGTGAAGCCGGCCGACAAAACCT
JMSF020G09+ AAGTGAAGCCGGCCGACAAAACCTGGGGAGCCACAACGAC
JMSF053E21+ AAGTGAAGCCGGCCGACAAAACCTGGGGAGCCACAACGACACGGCAGAAAGAATACGAGA
____________________________________________________________
consensus AAGTGAAGCCGGCCGACAAAACCTGGGGAGCCACAACGACACGGCAGAAAGAATACGAGA
. : . : . : . : . : . :
JMSF053E21+ TGTGGGTGTAGAGCCTGGAGCCCGGAGGTAGAGGCCTGAACACCACGCGCGCGACTCGTA
____________________________________________________________
consensus TGTGGGTGTAGAGCCTGGAGCCCGGAGGTAGAGGCCTGAACACCACGCGCGCGACTCGTA