| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001O12 | Sequence | 489 | 009590 (9) | ref|XP_006360895.1| | 8e-27 | PREDICTED: probable protein phosphatase 2C 60-like isoform X1 [Solanum tuberosu | 788 | 009590 (9) | gb|KJB47692.1| | 1e-127 | hypothetical protein B456_008G037200 [Gossypium raimondii] |
| JMFS095A05 | Sequence | 627 | 009590 (9) | ref|XP_009781837.1| | 9e-90 | PREDICTED: probable protein phosphatase 2C 46 [Nicotiana sylvestris] | |||||
| JMSF001J12 | Sequence | 636 | 009590 (9) | ref|XP_008457720.1| | 3e-96 | PREDICTED: probable protein phosphatase 2C 60 [Cucumis melo] ref|XP_008457721.1| | |||||
| JMSF001K12 | Sequence | 367 | 009590 (9) | 741 | 009590 (9) | gb|KJB47692.1| | 8e-121 | hypothetical protein B456_008G037200 [Gossypium raimondii] | |||
| JMSF026F12 | Sequence | 680 | 009590 (9) | ref|XP_011088628.1| | 1e-67 | PREDICTED: probable protein phosphatase 2C 60 [Sesamum indicum] ref|XP_011088629 | 746 | 009590 (9) | gb|KJB47692.1| | 4e-122 | hypothetical protein B456_008G037200 [Gossypium raimondii] |
| JMSF053C21 | Sequence | 664 | 009590 (9) | ref|XP_006360895.1| | 2e-25 | PREDICTED: probable protein phosphatase 2C 60-like isoform X1 [Solanum tuberosu | 916 | 021623 | gb|KJB47692.1| | 3e-152 | hypothetical protein B456_008G037200 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMSF001J12- TTNATGTTTTAGAAGAAGCTACATGTCTGCGAG
rJMSF001K12- TTTAGAAGAAGCTACATGTCTGCGAG
rJMSF026F12- GTCTGCGAG
____________________________________________________________
consensus TTNATGTTTTAGAAGAAGCTACATGTCTGCGAG
. : . : . : . : . : . :
rJMSF001J12- TGGCTGGTACGAAAATAGTACAACAAACAAAGAAAGAATTATATATAATTAAATTTAGCA
rJMSF001K12- TGGCTGGTACGAAAATAGTACAACAAACAAAGAAAGAATTATATATAATTAAATTTAGCA
rJMSF026F12- TGGCTGGTACGAAAATAGTACAACAAACAAAGAAAGAATTATATATAATTAAATTTAGCA
____________________________________________________________
consensus TGGCTGGTACGAAAATAGTACAACAAACAAAGAAAGAATTATATATAATTAAATTTAGCA
. : . : . : . : . : . :
rJMSF001J12- GGCAGCGCCAAATTAAAGGAGCATTACATTGCTGCGGTGGCGCATGGAGCAAGAGTGTTA
rJMSF001K12- GGCAGCGCCAAATTAAAGGAGCATTACATTGCTGCGGTGGCGCATGGAGCAAGAGTGTTA
rJMSF026F12- GGCAGCGCCAAATTAAAGGAGCATTACATTGCTGCGGTGGCGCATGGAGCAAGAGTGTTA
____________________________________________________________
consensus GGCAGCGCCAAATTAAAGGAGCATTACATTGCTGCGGTGGCGCATGGAGCAAGAGTGTTA
. : . : . : . : . : . :
rJMSF001J12- TGGCGCAGATTCAAAGTGCCTCCCTTGACAGACAGGCTAGCAACCTTGACAGGACCAAGA
rJMSF001K12- TGGCGCAGATTCAAAGTGCCTCCCTTGACAGACAGGCTAGCAACCTTGACAGGACCAAGA
rJMSF026F12- TGGCGCAGATTCAAAGTGCCTCCCTTGACAGACAGGCTAGCAACCTTGACAGGACCAAGA
____________________________________________________________
consensus TGGCGCAGATTCAAAGTGCCTCCCTTGACAGACAGGCTAGCAACCTTGACAGGACCAAGA
. : . : . : . : . : . :
rJMSF001J12- TTGGAGTTGAGGTATACAACCACCACTGTGATGTCATCGTGGAAATGGCGACGAACACCC
rJMSF001K12- TTGGAGTTGAGGTATACAACCACCACTGTGATGTCATCGTGGAAATGGCGACGAACACCC
rJMSF026F12- TTGGAGTTGAGGTATACAACCACCACTGTGATGTCATCGTGGAAATGGCGACGAACACCC
rJMFF001O12- TGTCATCGTGGAAATGGCGACGAACACCC
____________________________________________________________
consensus TTGGAGTTGAGGTATACAACCACCACTGTGATGTCATCGTGGAAATGGCGACGAACACCC
. : . : . : . : . : . :
rJMSF001J12- CTGTCTATTTTCTTCAAGTCTGAGTATCTCATTTCCCTTTTCTTGGCTGCTTCTCGCAGT
rJMSF001K12- CTGTCTATTTTCTTCAAGTCTGAGTATCTCATTTCCCTTTTCTTGGCTGCTTCTCGCAGT
rJMSF026F12- CTGTCTATTTTCTTCAAGTCTGAGTATCTCATTTCCCTTTTCTTGGCTGCTTCTCGCAGT
rJMFF001O12- CTGTCTATTTTCTTCAAGTCTGAGTATCTCATTTCCCTTTTCTTGGCTGCTTCTCGCAGT
____________________________________________________________
consensus CTGTCTATTTTCTTCAAGTCTGAGTATCTCATTTCCCTTTTCTTGGCTGCTTCTCGCAGT
. : . : . : . : . : . :
rJMSF001J12- GCAGTCTTTACTAGCCTTCTAGCAATCCCATTGCGGGGGTGATGTTGGACAATGTCAACA
rJMSF001K12- GCAGTCTTTACTAGCCTTCTAGCAATCCCATTGCGGGGGTGATGTTGGACAATGTCAACA
rJMSF026F12- GCAGTCTTTACTAGCCTTCTAGCAATCCCATTGCGGGGGTGATGTTGGACAATGTCAACA
rJMFF001O12- GCAGTCTTTACTAGCCTTCTAGCAATCCCATTGCGGGGGTGATGTTGGACAATGTCAACA
____________________________________________________________
consensus GCAGTCTTTACTAGCCTTCTAGCAATCCCATTGCGGGGGTGATGTTGGACAATGTCAACA
. : . : . : . : . : . :
rJMSF001J12- GCTTCTTGATTACTTAGGTGCTCCCACAGACCATCTGATGCAAATATCACAAATTGATCA
rJMSF001K12- GCTTCTTGATTACTTAGGTGCTCCCACAGACCATCTGATGCAAATATCACAAATTGATCA
rJMSF026F12- GCTTCTTGATTACTTAGGTGCTCCCACAGACCATCTGATGCAAATATCACAAATTGATCA
rJMFF001O12- GCTTCTTGACTACTTAGGTGCTCCCACAGACCATCTGATGCAAATATCACAAATTGATCA
____________________________________________________________
consensus GCTTCTTGATTACTTAGGTGCTCCCACAGACCATCTGATGCAAATATCACAAATTGATCA
. : . : . : . : . : . :
rJMSF001J12- TGAGATTGCAATTGGAGCACAGAAATGGATGGATCAGAGCTGAGTATGGGTTTTTTAAAA
rJMSF001K12- TGAGATTGCAATTGGAGCACAGAAATGGATGGATCAGAGCTGAGTATGGGTTTTTTAAAA
rJMSF026F12- TGAGATTGCAATTGGAGCACAGAAATGGATGGATCAGAGCTGAGTATGGGTTTTTTAAAA
rJMFF001O12- TGAGATTGCAATTGGAGCACAGAAATGGATGGATCAGAGCTGAGTATGGGTTTTTTAAAA
____________________________________________________________
consensus TGAGATTGCAATTGGAGCACAGAAATGGATGGATCAGAGCTGAGTATGGGTTTTTTAAAA
. : . : . : . : . : . :
rJMSF001J12- GGTTCACGCAGCCGAAATTTTGCATATAGTGGTTCCCTGTTGAATTCTGCTTTCTTCAAG
rJMSF001K12- GGTTCACGCAGCCGAAATTTTGCATATAGTGGTTCCCTGTTGAATTCTGCTTTCTTCAAG
rJMSF026F12- GGTTCACGCAGCCGAAATTTTGCATATAGTGGTTCCCTGTTGAATTCTGCTTTCTTCAAG
rJMFF001O12- GGTTCACGCAGCCGAAATTTTGCATATAGTGGTTCCCTGTTGAATTCTGCTTTCTTCAAG
____________________________________________________________
consensus GGTTCACGCAGCCGAAATTTTGCATATAGTGGTTCCCTGTTGAATTCTGCTTTCTTCAAG
. : . : . : . : . : . :
rJMSF001J12- TACACATCACCAATAGATCTTGTGATCTGTATAATGCCCTTGACACGCCACACATTGTGC
rJMSF001K12- TACACATCACCAATAGATCTTGTGATCTGTATAATGCCCTTGACACGCCACACATTGTGC
rJMSF026F12- TACACATCACCAATAGATCTTGTGATCTGTATAATGCCCTTGACACGCCACACATTGTGC
rJMFF001O12- TACACATCACCAATAGATCTTGTGATCTGTATAATGCCCTTGACACGCCACACATTGTGC
JMFS095A05+ CTGTATAATGCCCTTGACACGCCACACATTGTGC
____________________________________________________________
consensus TACACATCACCAATAGATCTTGTGATCTGTATAATGCCCTTGACACGCCACACATTGTGC
. : . : . : . : . : . :
rJMSF001J12- TTT
rJMSF001K12- TTTAAAACCACAATTTGTGAGTCATCTGGGTGCAAACATTGTAGCTCCTGTCTTACAGAT
rJMSF026F12- TTTAAAACCACAATTTGTGAGTCATCTGGGTGCAAACATTGTAGCTCCTGTCTTACAGAT
rJMFF001O12- TTTAAAACCACAATTTGTGAGTCATCTGGGTGCAAACATTGTAGCTCCTGTCTTACAGAT
JMFS095A05+ TTTAAAACCACAATTTGTGAGTCATCTGGGTGCAAACATTGTAGCTCCTGTCTTACAGAT
____________________________________________________________
consensus TTTAAAACCACAATTTGTGAGTCATCTGGGTGCAAACATTGTAGCTCCTGTCTTACAGAT
. : . : . : . : . : . :
rJMSF001K12- TCAATGCTTGCATTGTGTTCTGCCGACAGCTGTACTGCAAATACCTCCCCNGTCG
rJMSF026F12- TCAATGCTTGCATTGTGTTCTGCCGACAGCTGTACTGCAAATACCTCCCCCGTCGCCTT
rJMFF001O12- TCAATGCTTGCATTGTGTTCTGCCGACAGCTGTACTGCAAATACCTCCCCCGTCGCCTTC
JMFS095A05+ TCAATGCTTGCATTGTGTTCTGCCGACAGCTGTACTGCAAATACCTCCCCCGTCGCCTTC
____________________________________________________________
consensus TCAATGCTTGCATTGTGTTCTGCCGACAGCTGTACTGCAAATACCTCCCCCGTCGCCTTC
. : . : . : . : . : . :
rJMFF001O12- ACAAGCCTCCCTAAAACAGCACGCGAGTCT
JMFS095A05+ ACAAGCCTCCCTAAAACAGCACGCGAGTCTCCCAGGTTGGCAATATATAGAGATCCAGAG
____________________________________________________________
consensus ACAAGCCTCCCTAAAACAGCACGCGAGTCTCCCAGGTTGGCAATATATAGAGATCCAGAG
. : . : . : . : . : . :
JMFS095A05+ CAGATAACTCCAACAAGGCAGCATGATCCAACAGCAGCAATCTGTGGCTTCACTGCCCAT
____________________________________________________________
consensus CAGATAACTCCAACAAGGCAGCATGATCCAACAGCAGCAATCTGTGGCTTCACTGCCCAT
. : . : . : . : . : . :
JMFS095A05+ TGTGCCGACACAACTCTGTTAAACCCCTCTTCTGTTGCTTCAAATGCCTTTCGAATTACC
JMSF026F12+ TGCTTCAAATGCCTTTCGAATTACC
____________________________________________________________
consensus TGTGCCGACACAACTCTGTTAAACCCCTCTTCTGTTGCTTCAAATGCCTTTCGAATTACC
. : . : . : . : . : . :
JMFS095A05+ TCCACTGACATTGATTGCTGCTCAGAAACGAACCTCTTGAGGTAGTGGAACAGGTTGTCA
JMSF026F12+ TCCACTGACATTGATTGCTGCTCAGAAACGAACCTCTTGAGGTAGTGGAACAGGTTGTCA
____________________________________________________________
consensus TCCACTGACATTGATTGCTGCTCAGAAACGAACCTCTTGAGGTAGTGGAACAGGTTGTCA
. : . : . : . : . : . :
JMFS095A05+ TTGATATACCTAGAGGTCTCAGGGCCTCCATGCCCATCATAAATTCCCACAAAGGTA
JMSF026F12+ TTGATATACCTAGAGGTCTCAGGGCCTCCATGCCCATCATAAATTCCCACAAAGGTACCA
____________________________________________________________
consensus TTGATATACCTAGAGGTCTCAGGGCCTCCATGCCCATCATAAATTCCCACAAAGGTACCA
. : . : . : . : . : . :
JMFF001O12+ TCTTCCATC
JMSF026F12+ TATGGTCCATAGTCATATGAGCTTAAACACCCAGATTCAAGCCGACTCTGATCTTCCATC
JMSF053C21+ TCTTCCATC
____________________________________________________________
consensus TATGGTCCATAGTCATATGAGCTTAAACACCCAGATTCAAGCCGACTCTGATCTTCCATC
. : . : . : . : . : . :
JMFF001O12+ AGGTTATTGGCTTGAACTACAGCCATTGAGAACTCTCCACTAAAATGCTGCCCTGTATCC
JMSF026F12+ AGGTTATTGGCTTGAACTACAGCCATTGAGAACTCTCCACTAAAATGCTGCCCTGTATCC
JMSF053C21+ AGGTTATTGGCTTGAACTACAGCCATTGAGAACTCTCCACTAAAATGCTGCCCTGTATCC
____________________________________________________________
consensus AGGTTATTGGCTTGAACTACAGCCATTGAGAACTCTCCACTAAAATGCTGCCCTGTATCC
. : . : . : . : . : . :
JMFF001O12+ TTGTACCATAGGAGCCCATCTTGACGACCAGTAGCATCAGAACCCGAGTACACATGCCGT
JMSF026F12+ TTGTACCATAGGAGCCCATCTTGACGACCAGTAGCATCAGAACCCGAGTACACATGCCGT
JMSF053C21+ TTGTACCATAGGAGCCCATCTTGACGACCAGTAGCATCAGAACCCGAGTACACATGCCGT
____________________________________________________________
consensus TTGTACCATAGGAGCCCATCTTGACGACCAGTAGCATCAGAACCCGAGTACACATGCCGT
. : . : . : . : . : . :
JMFF001O12+ TCTCCCTTTGGGCAAAAGCACGCCCTCAGAATTTTCATCAACCCAGATAACATACCTCAT
JMSF026F12+ TCTCCCTTTGGGCAAAAGCACGCCCTCAGAATTTTCATCAACCCAGATAACATACCTCAT
JMSF053C21+ TCTCCCTTTGGGCAAAAGCACGCCCTCAGAATTTTCATCAACCCAGATAACATACCTCAT
____________________________________________________________
consensus TCTCCCTTTGGGCAAAAGCACGCCCTCAGAATTTTCATCAACCCAGATAACATACCTCAT
. : . : . : . : . : . :
JMFF001O12+ CTCATCCACACCAGCCTCCAATTGATTATCTTCTAACTTCTAAGTGACTCACTCCTCACG
JMSF026F12+ CTCATCCACACCAGCCTCCAATTGATTATCTTCTAACTTCTAAGTGACTCACTCCTCACG
JMSF053C21+ CTCATCCACACCAGCCTCCAATTGATTATCTTCTAACTTCTAAGTGACTCACTCCTCACG
____________________________________________________________
consensus CTCATCCACACCAGCCTCCAATTGATTATCTTCTAACTTCTAAGTGACTCACTCCTCACG
. : . : . : . : . : . :
JMFF001O12+ CCCACTTATGTCAATGCTTCTCTCTGCAGAAACAACAAAAATTCCCTGCACTTTGAGAAT
JMSF026F12+ CCCACTTATGTCAATGCTTCTCTCTGCAGAAACAACAAAAATTCC-----CTTTGAGAAT
JMSF001K12+ TTTGAGAAT
JMSF053C21+ CCCACTTATGTCAATGCTTCTCTCTGCAGAAACAACAAAAATTCC-----CTTTGAGAAT
____________________________________________________________
consensus CCCACTTATGTCAATGCTTCTCTCTGCAGAAACAACAAAAATTCC-----CTTTGAGAAT
. : . : . : . : . : . :
JMFF001O12+ GAATAGAAGATCTGAAAGCGAAAGAGCTTATAGATCTGCGGATCCTTCAAATCAAACTTT
JMSF026F12+ GAATAGAAGATCTGAAAGCGAAAGAGCTTATAGATCTGCGGATCCTTCAAATCAAACTTT
JMSF001K12+ GAATAGAAGATCTGAAAGCGAAAGAGCTTATAGATCTGCGGATCCTTCAAATCAAACTTT
JMSF053C21+ GAATAGAAGATCTGAAAGCGAAAGAGCTTATAGATCTGCGGATCCTTCAAATCAAACTTT
____________________________________________________________
consensus GAATAGAAGATCTGAAAGCGAAAGAGCTTATAGATCTGCGGATCCTTCAAATCAAACTTT
. : . : . : . : . : . :
JMFF001O12+ GACGGTTTCTTATCTATCTTTGTGTGTTTATCTAAAGTCAAAGAAAGAATAAAAAAGACG
JMSF026F12+ GACGGTTTCTTATCTATCTTTGTGTGTTTATCTAAAGTCAAAGAAAGAATAAAAAAGACG
JMSF001K12+ GACGGTTTCTTATCTATCTTTGTGTGTTTATCTAAAGTCAAAGAAAGAATAAAAAAGACG
JMSF053C21+ GACGGTTTCTTATCTATCTTTGTGTGTTTATCTAAAGTCAAAGAAAGAATAAAAAAGACG
____________________________________________________________
consensus GACGGTTTCTTATCTATCTTTGTGTGTTTATCTAAAGTCAAAGAAAGAATAAAAAAGACG
. : . : . : . : . : . :
JMFF001O12+ ATGGAAGAGAAATGAATGAAATCGATGAGAGTGAGCGTGTGAACTGGTTCGATTGTGCC
JMSF026F12+ ATGGAAGAGAAATGAATGAAATCGATGAGAGTGAGCGTGTGAACTGGTTCGATTGTGCC
JMSF001K12+ ATGGAAGAGAAATGAATGAAATCGATGAGAGTGAGCGTGTGAACTGGTTCGATTGTGCCA
JMSF053C21+ ATGGAAGAGAAATGAATGAAATCGATGAGAGTGAGCGTGTGAACTGGTTCGATTGTGCCA
____________________________________________________________
consensus ATGGAAGAGAAATGAATGAAATCGATGAGAGTGAGCGTGTGAACTGGTTCGATTGTGCCA
. : . : . : . : . : . :
JMSF001K12+ ATCTCTCTCTCAACAGACAAACCCCATTAAAAATAAAAACAATGGAGAGCTTCAGGCCAG
JMSF053C21+ ATCTCTCTCTCAACAGACAAACCCCATTAAAAATAAAAACAATGGAGAGCTTCAGGCCAG
____________________________________________________________
consensus ATCTCTCTCTCAACAGACAAACCCCATTAAAAATAAAAACAATGGAGAGCTTCAGGCCAG
. : . : . : . : . : . :
JMSF001K12+ CAAAGCAGAGGACCAGCTTGGGCTCCACAAACCTGCCTCTTCACTCCCAACCTTTTGCTA
JMSF053C21+ CAAAGCAGAGGACCAGCTTGGGCTCCACAAACCTGCCTCTTCACTCCCAACCTTTTGCTA
____________________________________________________________
consensus CAAAGCAGAGGACCAGCTTGGGCTCCACAAACCTGCCTCTTCACTCCCAACCTTTTGCTA
. : . : . : . : . : . :
JMSF001K12+ CACAAACAAATGATCTTCAAAATCTGTACTGACAAATAACCGACGCTTCTTCGCTC
JMSF053C21+ CACAAACAAATGATCTTCAAAATCTGTACTGACAAATAACCGACGCTTCTTCGCTCGCTC
____________________________________________________________
consensus CACAAACAAATGATCTTCAAAATCTGTACTGACAAATAACCGACGCTTCTTCGCTCGCTC