Contig 009587:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052K08+                         TGTTTAGAANCCAAATCATGAAACTGAAAGAGGGATCTGGTGAATT
                      ____________________________________________________________
consensus                           TGTTTAGAANCCAAATCATGAAACTGAAAGAGGGATCTGGTGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+                                           CTGTAAAGATTGTTATCTCCATGTTTAC
JMSF052K08+           TTGCTTCAGCAGAGATTCAAGAAACCAAGAAACTGTAAAGATTGTTATCTCCATGTTTAC
                      ____________________________________________________________
consensus             TTGCTTCAGCAGAGATTCAAGAAACCAAGAAACTGTAAAGATTGTTATCTCCATGTTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           AATATGAACAGCCCTGAATTCCAGAAACTAAAAGCATAATCTTCAATTCAACACAGAAAA
JMSF052K08+           AATATGAACAGCCCTGAATTCCAGAAACTAAAAGCATAATCTTCAATTCAACACAGAAAA
                      ____________________________________________________________
consensus             AATATGAACAGCCCTGAATTCCAGAAACTAAAAGCATAATCTTCAATTCAACACAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           TCAAGAACCCAGATTATAAATTCTAGCAAATTGCAAAATATATTGGCTGCAGAGGTTTTT
JMSF052K08+           TCAAGAACCCNGATTATNAATTCTAGCAAATTGCAAAATATATTGGCTGCAGAGGTTTTT
                      ____________________________________________________________
consensus             TCAAGAACCCAGATTATAAATTCTAGCAAATTGCAAAATATATTGGCTGCAGAGGTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           TGAAGCATGGTAAATCATTGGTTGTGTTAGAATTGAGGTAGGAATCAAGAGAAGAAAAAA
JMSF052K08+           TGAAGCATGGTAAATCATTGGTTGTGTTAGAATTGAGGTAGGAATCAAGAGAAGAAAAAA
                      ____________________________________________________________
consensus             TGAAGCATGGTAAATCATTGGTTGTGTTAGAATTGAGGTAGGAATCAAGAGAAGAAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           AGTTCAGAATTTCAGATTCACTTCCAACATAATAATGAAGATTTACAAGACAACAAAAGT
JMSF052K08+           AGTTCAGAATTTCAGATTCACTTCCAACATAATAATGAAGATTTACAAGACAACAAAAGT
                      ____________________________________________________________
consensus             AGTTCAGAATTTCAGATTCACTTCCAACATAATAATGAAGATTTACAAGACAACAAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           ACTACAAGAGACAAGCTCTAATGAAGCTTCTTAGCTAACAGTGTCTACACCTACAAAGGA
JMSF052K08+           ACTACAAGAGACAAGCTCTAATGAAGCTTCTTAGCTAACAGTGTCTACACCTACAAAGGA
                      ____________________________________________________________
consensus             ACTACAAGAGACAAGCTCTAATGAAGCTTCTTAGCTAACAGTGTCTACACCTACAAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           TGTGCACATTCAAAACATCCTAGTACAAGCTAAGCAGCTGCCTCCTCCTTGCAAATCTCA
JMSF052K08+           TGTGCACATTCAAAACATCCTAGTACAAGCTAAGCAGCTGCCTCCTCCTTGCAAATCTCA
                      ____________________________________________________________
consensus             TGTGCACATTCAAAACATCCTAGTACAAGCTAAGCAGCTGCCTCCTCCTTGCAAATCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005D24+           CA                                                          
JMSF052K08+           CATGGATTTCAAGAATGTTTTGCCATTAGCATAATAGCATTGGAAACAAGAGAATCCAAC
                      ____________________________________________________________
consensus             CATGGATTTCAAGAATGTTTTGCCATTAGCATAATAGCATTGGAAACAAGAGAATCCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052K08+           ACACAGGACTAGCTCAAGTGGTCGACCACCGGACCTAAAGTGAGCACTTCAGCAGCAAGG
                      ____________________________________________________________
consensus             ACACAGGACTAGCTCAAGTGGTCGACCACCGGACCTAAAGTGAGCACTTCAGCAGCAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052K08+           AGGGAGCTTGGGCCCTCGGGCTTCCTTGGGATTAGTGGTTGCGAGTTTCCCTCGTCACTC
                      ____________________________________________________________
consensus             AGGGAGCTTGGGCCCTCGGGCTTCCTTGGGATTAGTGGTTGCGAGTTTCCCTCGTCACTC