Contig 009584:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF052F09Sequence699009584 (2)883009584 (2)

Alignment

This contig is upended


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rJMSF052F09-                             TAGCCTATGGTAAGAAGTTGTCCCATAAAAGGAAGCATAAG
                      ____________________________________________________________
consensus                                TAGCCTATGGTAAGAAGTTGTCCCATAAAAGGAAGCATAAG
 
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rJMSF052F09-          ATTGCTGACCTCATCCGCAGATTTGGCTCACGGGGCCACAACAAGCTGATGCATGATCCG
                      ____________________________________________________________
consensus             ATTGCTGACCTCATCCGCAGATTTGGCTCACGGGGCCACAACAAGCTGATGCATGATCCG
 
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rJMSF052F09-          TGTGTCCACAACAATGAAACATGCAGTGAGTGGAGAAAGAAAGTAAAAGAAGATAAAAAC
                      ____________________________________________________________
consensus             TGTGTCCACAACAATGAAACATGCAGTGAGTGGAGAAAGAAAGTAAAAGAAGATAAAAAC
 
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rJMSF052F09-          CAGATGAGATGGGTGGCTGAAGAATCTTTGAAAGGTTCGTAGTGGTGTTACACAAAAGGT
                      ____________________________________________________________
consensus             CAGATGAGATGGGTGGCTGAAGAATCTTTGAAAGGTTCGTAGTGGTGTTACACAAAAGGT
 
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rJMSF052F09-          TACACAACCCTCAATTCTAACTTCCTCAACGTCAAAATCAATCTTCTGTATCAAAAGGTG
                      ____________________________________________________________
consensus             TACACAACCCTCAATTCTAACTTCCTCAACGTCAAAATCAATCTTCTGTATCAAAAGGTG
 
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rJMSF052F09-          ACTTGAGGAATTTCCAGCTTTCGGCGGTTTCCACAACTATTAAGCCACAAGAGTTGATAT
JMSF052F09+                                CGGCGGTTTCCACAANTATTAAGCCACAAGAGTTGATAT
                      ____________________________________________________________
consensus             ACTTGAGGAATTTCCAGCTTTCGGCGGTTTCCACAACTATTAAGCCACAAGAGTTGATAT
 
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rJMSF052F09-          TCTTTCTCATAAATGGAGATGGACCACATCATCCATTTGCCACATCTAACATCATCCTTG
JMSF052F09+           TCTTTCTCATAAATGGAGATGGACCACATCATCCATTTGCCACATCTAACATCATCCTTG
                      ____________________________________________________________
consensus             TCTTTCTCATAAATGGAGATGGACCACATCATCCATTTGCCACATCTAACATCATCCTTG
 
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rJMSF052F09-          AAGCAGGTAGACCGGATAGATTATTTTATCCCTGGTTTACATCTTCCATTTTGTCGGCTA
JMSF052F09+           AAGCAGGTAGACCGGATAGATTATTTTATCCCTGGTTTACATCTTCCATTTTGTCGGCTA
                      ____________________________________________________________
consensus             AAGCAGGTAGACCGGATAGATTATTTTATCCCTGGTTTACATCTTCCATTTTGTCGGCTA
 
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rJMSF052F09-          ACCCTGGCAGTTTATGAACTCTGTTCAACCAGTTTCTCCCCCATCAGTATCTATAATTCT
JMSF052F09+           ACCCTGGCAGTTTATGAACTCTGTTCAACCAGTTTCTCCCCCATCAGTATCTATAATTCT
                      ____________________________________________________________
consensus             ACCCTGGCAGTTTATGAACTCTGTTCAACCAGTTTCTCCCCCATCAGTATCTATAATTCT
 
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rJMSF052F09-          TGAGAGATAAGATTCACAGCAACCTTCAAGACGGCTTCATTATATAGATGGTGACAAGGC
JMSF052F09+           TGAGAGATAAGATTCACAGCAACCTTCAAGACGGCTTCATTATATAGATGGTGACAAGGC
                      ____________________________________________________________
consensus             TGAGAGATAAGATTCACAGCAACCTTCAAGACGGCTTCATTATATAGATGGTGACAAGGC
 
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rJMSF052F09-          ACTTAGAAAGAGGGGAGGTTCAGAAAGCACAATGAGCTGGAAGATCATAGTATATCAATT
JMSF052F09+           ACTTAGAAAGAGGGGAGGTTCAGAAAGCACAATGAGCTGGAAGATCATAGTATATCAATT
                      ____________________________________________________________
consensus             ACTTAGAAAGAGGGGAGGTTCAGAAAGCACAATGAGCTGGAAGATCATAGTATATCAATT
 
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rJMSF052F09-          GAGGGGACACAAACAGACGTGCGGAAGTGGCATTTTCTGAAAAATTGATGATGCTTCTGG
JMSF052F09+           GAGGGGACACAAACAGACGTGCGGAAGTGGCATTTTCTGAAAAATTGATGATGCTTCTGG
                      ____________________________________________________________
consensus             GAGGGGACACAAACAGACGTGCGGAAGTGGCATTTTCTGAAAAATTGATGATGCTTCTGG
 
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rJMSF052F09-          TGAAGACAAGACATTCATATGTCCAAACAGCTTTCATATCTGCAACTGCAAACTAAGCAA
JMSF052F09+           TGAAGACAAGACATTCATATGTCCAAACAGCTTTCATATCTGCAACTGCAAACTAAGCAA
                      ____________________________________________________________
consensus             TGAAGACAAGACATTCATATGTCCAAACAGCTTTCATATCTGCAACTGCAAACTAAGCAA
 
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rJMSF052F09-          GCAGTGCCTTGAATGCAGGAATTGTTCTTGCCAGTTAGTTTTGAGCAAAATTTAATCTCC
JMSF052F09+           GCAGTGCCTTGAATGCAGGAATTGTTCTTGCCAGTTAGTTTTGAGCAAAATTTAATCTCC
                      ____________________________________________________________
consensus             GCAGTGCCTTGAATGCAGGAATTGTTCTTGCCAGTTAGTTTTGAGCAAAATTTAATCTCC
 
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rJMSF052F09-          CATCACTCTTCAGTTACTTGCATTCATCTTCAAGACTCATACCTCCCAAACACGACGGAG
JMSF052F09+           CATCACTCTTCAGTTACTTGCATTCATCTTCAAGACTCATACCTCCCAAACACGACGGAG
                      ____________________________________________________________
consensus             CATCACTCTTCAGTTACTTGCATTCATCTTCAAGACTCATACCTCCCAAACACGACGGAG
 
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rJMSF052F09-          AT                                                          
JMSF052F09+           ATGCTTTGGGAGTGGTAGCGAGATTTTTATTCTCTTCCAAACAAGGCCGCCGGAGTTAGT
                      ____________________________________________________________
consensus             ATGCTTTGGGAGTGGTAGCGAGATTTTTATTCTCTTCCAAACAAGGCCGCCGGAGTTAGT
 
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JMSF052F09+           ATTCGCGGCGACGCCATTCCCTATCCCGGCCTCCTTCACGCCCTGTCATCGTGTCAACCC
                      ____________________________________________________________
consensus             ATTCGCGGCGACGCCATTCCCTATCCCGGCCTCCTTCACGCCCTGTCATCGTGTCAACCC